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The map label for this gene is 71909931

Identifier: 71909931

GI number: 71909931

Start: 128461

End: 128856

Strand: Reverse

Name: 71909931

Synonym: M5005_Spy_0117

Alternate gene names: NA

Gene position: 128856-128461 (Counterclockwise)

Preceding gene: 71909932

Following gene: 71909929

Centisome position: 7.01

GC content: 36.36

Gene sequence:

>396_bases
ATGAGTCACAAAACCTTTCAAGAGACGTTTGATAGTAATCCTAACATCTCTATCAAAGCATTACATCGTCAAAACTTAGT
AACTTTTGATAAAACCTTTATGATTAATCATCAGCTTACCACCTTATTTGAAGAAGCAAATAGTCTTCCTGTAGTCAAAT
GTTATTCTGCCTCGTGGGATTTTTTATTAAATTGCACGCGCTATTCCTCTTACCTAACAATCCTACCAAGACCTATTACT
CATTTTGCTCATATGGACGGTTTAGTGGAGGTCCAACTGACCGAACATCCAAAATGGGAAGTTGTTCTAGCCTCTCTCAA
GCACAACAAAACAAGCCATTTAAAACATTATATCAAGCACACCATCTTAGATTATTTCATGAACCAGCGCTTCTAA

Upstream 100 bases:

>100_bases
TCTAAAAGAAGTCGATTTTGCGATTTTATTAACACCCACTACACTAGATGCTACTATTGCTGATATCGACATTCTCCTAA
GAGATCAACTCTGCCTTTAT

Downstream 100 bases:

>100_bases
TTGCTGGACTCAGACCTTAAAAAAACGCCTGAAGGAAACAATCCCAAGCGTTTCATGTAGTTATTTCCTAAAATACAAAT
AGGTAAATGATGGCAATACC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MSHKTFQETFDSNPNISIKALHRQNLVTFDKTFMINHQLTTLFEEANSLPVVKCYSASWDFLLNCTRYSSYLTILPRPIT
HFAHMDGLVEVQLTEHPKWEVVLASLKHNKTSHLKHYIKHTILDYFMNQRF

Sequences:

>Translated_131_residues
MSHKTFQETFDSNPNISIKALHRQNLVTFDKTFMINHQLTTLFEEANSLPVVKCYSASWDFLLNCTRYSSYLTILPRPIT
HFAHMDGLVEVQLTEHPKWEVVLASLKHNKTSHLKHYIKHTILDYFMNQRF
>Mature_130_residues
SHKTFQETFDSNPNISIKALHRQNLVTFDKTFMINHQLTTLFEEANSLPVVKCYSASWDFLLNCTRYSSYLTILPRPITH
FAHMDGLVEVQLTEHPKWEVVLASLKHNKTSHLKHYIKHTILDYFMNQRF

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 15481; Mature: 15350

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHKTFQETFDSNPNISIKALHRQNLVTFDKTFMINHQLTTLFEEANSLPVVKCYSASWD
CCCCCHHHHHCCCCCEEEEEECCCCCEEECEEEEECHHHHHHHHHCCCCCEEEEECCCCH
FLLNCTRYSSYLTILPRPITHFAHMDGLVEVQLTEHPKWEVVLASLKHNKTSHLKHYIKH
HEEEHHHHCCEEEECCCHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHH
TILDYFMNQRF
HHHHHHHHCCC
>Mature Secondary Structure 
SHKTFQETFDSNPNISIKALHRQNLVTFDKTFMINHQLTTLFEEANSLPVVKCYSASWD
CCCCHHHHHCCCCCEEEEEECCCCCEEECEEEEECHHHHHHHHHCCCCCEEEEECCCCH
FLLNCTRYSSYLTILPRPITHFAHMDGLVEVQLTEHPKWEVVLASLKHNKTSHLKHYIKH
HEEEHHHHCCEEEECCCHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHH
TILDYFMNQRF
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]