Click here to switch to the map view.

The map label for this gene is atoE [H]

Identifier: 71909930

GI number: 71909930

Start: 126987

End: 128393

Strand: Direct

Name: atoE [H]

Synonym: M5005_Spy_0116

Alternate gene names: 71909930

Gene position: 126987-128393 (Clockwise)

Preceding gene: 71909928

Following gene: 71909933

Centisome position: 6.91

GC content: 39.8

Gene sequence:

>1407_bases
ATGAATAACATCAAAACCAAAAAAAGGTTTATGGATCGCTATATTGATGGCTTTATGAAATGGATGCCAGAATCGCTTTT
TATCTGTTTTATTTTAACCTTTTTAGTCGTTACTATGTCTGTGTTGATGACGGATAGTCCCTTTATTGGTACGGAAAAGA
CGGGCGGGATTATCTATGGCTGGGTAAATGGTTTTTGGGGGCTGTTGTCCTTTGCCATGCAGATGACTATTTTACTTGCG
ACAGGGAATGCTGTAGCGAGTTCTCCACCTGCTCATAAGATGTTTAAGTCCCTTGCCAAACTGCCTCAAACCAGGACTCA
GATTTTTATCTTTTCCATTGTAGTAGGCTCTATCTTTGGCTTTTTACACTGGGGTCTTGGTATGATGGTTGCTATTGTGT
TTGGGAAAGAGTTGCTTGTTCAGGCTAGGCAAAAAGGGATTAAGGTGCATACGCCTTTGTTTGTTGCTACTTTATTTTTT
ACCTTTTTACCAGCTACTTCTGGTCTATCTGGTGCTGCGGTGCTTTATTCGGCTACTCCAGATTATTTGCGAAATAGTGT
CGCAGATGCTTATAAACAGGTTGTTCCTGAAAGTGTTCCTCTGACAGAATCAGTTTTGAATCTTCCATTTATCAGTCTTT
TAGTGGTGTGTATGCTGGAACCGCTTTGCTTTGCTTTATTGGCGCACCCAAAAGATGAAACTAAAATCATGGAACTTGAT
GATGAGATCTATCACCATAGTCTTGATACCGCTTCACATGTTGTTATTGCAAGAAACACACCTGCTGAAAAGATGAACGC
ATCTCGCTTAGTGATGTATCTTGTTGGTGGGGCCATTGTTAGCTATAGCCTTTATCATTTTTCGGTGGTGGGCTTGTCTG
GTCTAGATCTCAATTGTTTTAACTTTTTATTTTTAGGCTTAGGCTTGCTTCTTTGTGGTCAACAAGGACCAGAATATTAT
GGTTCCTTATTCAAAGATGGGGTCATGTCATCTTGGGGCTTGGTGCTTCAGTTTCCATTTTACGCTGGTATTTTTGGAAT
CATTCAAAGTACAGGTTTAGGATTAGAGATTTCCCATTTCTTTGTCGCTATTTCAAATGGGACAACATGGCCGGTCTTTG
CTTATCTTTACTCGGCTTTGCTGAATATTGCGGTACCATCAGGAGGCTCAAAATTTGTGATTGAAGCTCCCTATATCGTC
CCTGCAACTATCGAAGTTGGTAATGACTTAGGTAAGATTTTGCAGGCTTATCAATTAGGAGATGCCACAACAAACTTGAT
AGTTCCTTTTTGGGCCTTATCTTACCTCTCAAACTTCAAACTAAAATTCAATCAAATTGTGGCTTATACTATTCCTTGTG
TCTTGGTGGTCACAGGTATTGCCATCATTTACCTATTTGTATTTTAG

Upstream 100 bases:

>100_bases
GATAACTAAATGAACTAAAGAAACGCTTATTAATATTATCGACAGGTTACTGGTCAAAAGAACAAAAGTGCTTTTGGACA
ATGTGAAAGGAATTGACAAC

Downstream 100 bases:

>100_bases
GAAATAACTACATGAAACGCTTGGGATTGTTTCCTTCAGGCGTTTTTTTAAGGTCTGAGTCCAGCAATTAGAAGCGCTGG
TTCATGAAATAATCTAAGAT

Product: short-chain fatty acids transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MNNIKTKKRFMDRYIDGFMKWMPESLFICFILTFLVVTMSVLMTDSPFIGTEKTGGIIYGWVNGFWGLLSFAMQMTILLA
TGNAVASSPPAHKMFKSLAKLPQTRTQIFIFSIVVGSIFGFLHWGLGMMVAIVFGKELLVQARQKGIKVHTPLFVATLFF
TFLPATSGLSGAAVLYSATPDYLRNSVADAYKQVVPESVPLTESVLNLPFISLLVVCMLEPLCFALLAHPKDETKIMELD
DEIYHHSLDTASHVVIARNTPAEKMNASRLVMYLVGGAIVSYSLYHFSVVGLSGLDLNCFNFLFLGLGLLLCGQQGPEYY
GSLFKDGVMSSWGLVLQFPFYAGIFGIIQSTGLGLEISHFFVAISNGTTWPVFAYLYSALLNIAVPSGGSKFVIEAPYIV
PATIEVGNDLGKILQAYQLGDATTNLIVPFWALSYLSNFKLKFNQIVAYTIPCVLVVTGIAIIYLFVF

Sequences:

>Translated_468_residues
MNNIKTKKRFMDRYIDGFMKWMPESLFICFILTFLVVTMSVLMTDSPFIGTEKTGGIIYGWVNGFWGLLSFAMQMTILLA
TGNAVASSPPAHKMFKSLAKLPQTRTQIFIFSIVVGSIFGFLHWGLGMMVAIVFGKELLVQARQKGIKVHTPLFVATLFF
TFLPATSGLSGAAVLYSATPDYLRNSVADAYKQVVPESVPLTESVLNLPFISLLVVCMLEPLCFALLAHPKDETKIMELD
DEIYHHSLDTASHVVIARNTPAEKMNASRLVMYLVGGAIVSYSLYHFSVVGLSGLDLNCFNFLFLGLGLLLCGQQGPEYY
GSLFKDGVMSSWGLVLQFPFYAGIFGIIQSTGLGLEISHFFVAISNGTTWPVFAYLYSALLNIAVPSGGSKFVIEAPYIV
PATIEVGNDLGKILQAYQLGDATTNLIVPFWALSYLSNFKLKFNQIVAYTIPCVLVVTGIAIIYLFVF
>Mature_468_residues
MNNIKTKKRFMDRYIDGFMKWMPESLFICFILTFLVVTMSVLMTDSPFIGTEKTGGIIYGWVNGFWGLLSFAMQMTILLA
TGNAVASSPPAHKMFKSLAKLPQTRTQIFIFSIVVGSIFGFLHWGLGMMVAIVFGKELLVQARQKGIKVHTPLFVATLFF
TFLPATSGLSGAAVLYSATPDYLRNSVADAYKQVVPESVPLTESVLNLPFISLLVVCMLEPLCFALLAHPKDETKIMELD
DEIYHHSLDTASHVVIARNTPAEKMNASRLVMYLVGGAIVSYSLYHFSVVGLSGLDLNCFNFLFLGLGLLLCGQQGPEYY
GSLFKDGVMSSWGLVLQFPFYAGIFGIIQSTGLGLEISHFFVAISNGTTWPVFAYLYSALLNIAVPSGGSKFVIEAPYIV
PATIEVGNDLGKILQAYQLGDATTNLIVPFWALSYLSNFKLKFNQIVAYTIPCVLVVTGIAIIYLFVF

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=468, Percent_Identity=30.3418803418803, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 51498; Mature: 51498

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIKTKKRFMDRYIDGFMKWMPESLFICFILTFLVVTMSVLMTDSPFIGTEKTGGIIYG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEH
WVNGFWGLLSFAMQMTILLATGNAVASSPPAHKMFKSLAKLPQTRTQIFIFSIVVGSIFG
HHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FLHWGLGMMVAIVFGKELLVQARQKGIKVHTPLFVATLFFTFLPATSGLSGAAVLYSATP
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCCCCCEEEEECCH
DYLRNSVADAYKQVVPESVPLTESVLNLPFISLLVVCMLEPLCFALLAHPKDETKIMELD
HHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHH
DEIYHHSLDTASHVVIARNTPAEKMNASRLVMYLVGGAIVSYSLYHFSVVGLSGLDLNCF
HHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHH
NFLFLGLGLLLCGQQGPEYYGSLFKDGVMSSWGLVLQFPFYAGIFGIIQSTGLGLEISHF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHEECHHHHHHHHHHHHCCCCEEEEEE
FVAISNGTTWPVFAYLYSALLNIAVPSGGSKFVIEAPYIVPATIEVGNDLGKILQAYQLG
EEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEHHHCHHHHHHHHHHHCC
DATTNLIVPFWALSYLSNFKLKFNQIVAYTIPCVLVVTGIAIIYLFVF
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNNIKTKKRFMDRYIDGFMKWMPESLFICFILTFLVVTMSVLMTDSPFIGTEKTGGIIYG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEH
WVNGFWGLLSFAMQMTILLATGNAVASSPPAHKMFKSLAKLPQTRTQIFIFSIVVGSIFG
HHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FLHWGLGMMVAIVFGKELLVQARQKGIKVHTPLFVATLFFTFLPATSGLSGAAVLYSATP
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCCCCCEEEEECCH
DYLRNSVADAYKQVVPESVPLTESVLNLPFISLLVVCMLEPLCFALLAHPKDETKIMELD
HHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHH
DEIYHHSLDTASHVVIARNTPAEKMNASRLVMYLVGGAIVSYSLYHFSVVGLSGLDLNCF
HHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHH
NFLFLGLGLLLCGQQGPEYYGSLFKDGVMSSWGLVLQFPFYAGIFGIIQSTGLGLEISHF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHEECHHHHHHHHHHHHCCCCEEEEEE
FVAISNGTTWPVFAYLYSALLNIAVPSGGSKFVIEAPYIVPATIEVGNDLGKILQAYQLG
EEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEHHHCHHHHHHHHHHHCC
DATTNLIVPFWALSYLSNFKLKFNQIVAYTIPCVLVVTGIAIIYLFVF
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]