| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is livG [H]
Identifier: 71908382
GI number: 71908382
Start: 2968918
End: 2969691
Strand: Reverse
Name: livG [H]
Synonym: Daro_2769
Alternate gene names: 71908382
Gene position: 2969691-2968918 (Counterclockwise)
Preceding gene: 71908383
Following gene: 71908381
Centisome position: 65.98
GC content: 63.82
Gene sequence:
>774_bases ATGAGTGACAACCATAACGAGGCGCTGCTGGTCGCCAACAAGATCACGCGCCGCTTCGGCGGCCTGGTCGCCAACCAGGA TGTCTGCGTCGACCTGATCCGCGGCAAGGTGCATGTCCTGCTTGGCCCGAACGGGGCCGGCAAGTCGACCTGCATCAACA TGCTGTCCGGTGATCTGCCGCCGAGCGATGGCCAGATTCTGTTCATGGGCAAGGACATCACCGGCCTGACGGCCGCCCAG CGTTCGCTGGTCGGGATTGGCCGCAGCTATCAGCGAACCAACATCTTCCCGAAATTCACGGTGCTGGAAAGCGTCCGGCT GGCGGCGCAATCGCGCAACCAGCAGCCGTGGCGCATCTTCAGCAAGGCACAGGAGCAGAAATGGGCCCTCGACAAGGCCC GGGCCTGCATCGAGGAGGCCGGACTGGGCAAGAAGGTCGACTGGGTGTCCGGCGTGCTCAGCCATGGCGAGCAGCGCCAG CTCGAAATCGCCATGGTGCTCGCCACCGACGCTCAGGTCATGCTGCTCGACGAGCCGCTGGCCGGCATGGGCTCGGACGA GTCGGCCAAGATGGTCGAGGTTTTGAAACGCCTCAAGCCGACGCGCGCCATCCTGCTCGTCGAACACGACATGGACGCCG TGTTTGCGGTGGCCGACACCATTACCGTGATGGTCAACGGCCAGGTCCTGGAATCCGGGCCACCCGCCCAGATCAAGGCC AGCGTGGCCGTCCAGCAAGCCTATTTGGGATCGGAGGACAGCTTCCATGTCTAA
Upstream 100 bases:
>100_bases ATCATGGGGGGCGTCATCGTCGCTGCCGTTCTCTTCCTGCCCGGTGGCCTGGCGGCCATTCCGGGCCGCATCAAGCGTTC GCTGCAAGGCGGAGGTTCCA
Downstream 100 bases:
>100_bases CATGCTGCTCGAAGCCAAGGAGCTTCACACTTACTACGGTGCCAGCCACATCCTGCACGGCATCGATTTCAACATCCGCC AGGGCGAGGGCATCGCGCTG
Product: ABC transporter related
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: LIV-I protein G [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSDNHNEALLVANKITRRFGGLVANQDVCVDLIRGKVHVLLGPNGAGKSTCINMLSGDLPPSDGQILFMGKDITGLTAAQ RSLVGIGRSYQRTNIFPKFTVLESVRLAAQSRNQQPWRIFSKAQEQKWALDKARACIEEAGLGKKVDWVSGVLSHGEQRQ LEIAMVLATDAQVMLLDEPLAGMGSDESAKMVEVLKRLKPTRAILLVEHDMDAVFAVADTITVMVNGQVLESGPPAQIKA SVAVQQAYLGSEDSFHV
Sequences:
>Translated_257_residues MSDNHNEALLVANKITRRFGGLVANQDVCVDLIRGKVHVLLGPNGAGKSTCINMLSGDLPPSDGQILFMGKDITGLTAAQ RSLVGIGRSYQRTNIFPKFTVLESVRLAAQSRNQQPWRIFSKAQEQKWALDKARACIEEAGLGKKVDWVSGVLSHGEQRQ LEIAMVLATDAQVMLLDEPLAGMGSDESAKMVEVLKRLKPTRAILLVEHDMDAVFAVADTITVMVNGQVLESGPPAQIKA SVAVQQAYLGSEDSFHV >Mature_256_residues SDNHNEALLVANKITRRFGGLVANQDVCVDLIRGKVHVLLGPNGAGKSTCINMLSGDLPPSDGQILFMGKDITGLTAAQR SLVGIGRSYQRTNIFPKFTVLESVRLAAQSRNQQPWRIFSKAQEQKWALDKARACIEEAGLGKKVDWVSGVLSHGEQRQL EIAMVLATDAQVMLLDEPLAGMGSDESAKMVEVLKRLKPTRAILLVEHDMDAVFAVADTITVMVNGQVLESGPPAQIKAS VAVQQAYLGSEDSFHV
Specific function: Component of the leucine-specific transport system [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI105990541, Length=211, Percent_Identity=32.2274881516588, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI116734710, Length=230, Percent_Identity=30.4347826086957, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI27881501, Length=226, Percent_Identity=28.7610619469027, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI30795238, Length=226, Percent_Identity=28.7610619469027, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI45446740, Length=242, Percent_Identity=28.099173553719, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI47078218, Length=242, Percent_Identity=28.099173553719, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI21536376, Length=212, Percent_Identity=29.2452830188679, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI153792144, Length=236, Percent_Identity=29.6610169491525, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI150417984, Length=229, Percent_Identity=27.5109170305677, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI31657092, Length=226, Percent_Identity=26.9911504424779, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI27262624, Length=220, Percent_Identity=28.1818181818182, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI27262626, Length=220, Percent_Identity=28.1818181818182, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI27477115, Length=216, Percent_Identity=27.3148148148148, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI27436953, Length=222, Percent_Identity=25.2252252252252, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI6005701, Length=229, Percent_Identity=27.0742358078603, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI62526033, Length=213, Percent_Identity=26.2910798122066, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI215820660, Length=197, Percent_Identity=29.4416243654822, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI20143975, Length=197, Percent_Identity=29.4416243654822, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1789864, Length=256, Percent_Identity=35.15625, Blast_Score=152, Evalue=2e-38, Organism=Escherichia coli, GI1790190, Length=225, Percent_Identity=31.5555555555556, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1788210, Length=241, Percent_Identity=30.7053941908714, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI1789593, Length=246, Percent_Identity=29.2682926829268, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI87081709, Length=247, Percent_Identity=27.9352226720648, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI48995001, Length=228, Percent_Identity=27.6315789473684, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787792, Length=245, Percent_Identity=25.7142857142857, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788897, Length=230, Percent_Identity=30.4347826086957, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1788472, Length=231, Percent_Identity=26.8398268398268, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI87082268, Length=255, Percent_Identity=28.2352941176471, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1790525, Length=222, Percent_Identity=30.1801801801802, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1788761, Length=232, Percent_Identity=27.5862068965517, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1787089, Length=227, Percent_Identity=29.9559471365639, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1789991, Length=223, Percent_Identity=27.8026905829596, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1788450, Length=230, Percent_Identity=27.3913043478261, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87081791, Length=260, Percent_Identity=26.1538461538462, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87081782, Length=238, Percent_Identity=26.4705882352941, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1789032, Length=234, Percent_Identity=26.0683760683761, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1787712, Length=247, Percent_Identity=24.2914979757085, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1786398, Length=217, Percent_Identity=29.0322580645161, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1789672, Length=238, Percent_Identity=25.6302521008403, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1786803, Length=245, Percent_Identity=27.3469387755102, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1786563, Length=223, Percent_Identity=28.6995515695067, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1788225, Length=236, Percent_Identity=27.9661016949153, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI1790467, Length=227, Percent_Identity=25.5506607929515, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI48994997, Length=240, Percent_Identity=26.25, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786345, Length=253, Percent_Identity=26.4822134387352, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1787029, Length=226, Percent_Identity=25.6637168141593, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI87081834, Length=216, Percent_Identity=26.8518518518519, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1787370, Length=206, Percent_Identity=28.6407766990291, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1790739, Length=243, Percent_Identity=26.7489711934156, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1786872, Length=200, Percent_Identity=28.5, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI48994943, Length=253, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1786703, Length=203, Percent_Identity=28.0788177339901, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1790162, Length=229, Percent_Identity=26.6375545851528, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787112, Length=203, Percent_Identity=30.5418719211823, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786253, Length=219, Percent_Identity=24.6575342465753, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1787105, Length=219, Percent_Identity=26.027397260274, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1790544, Length=245, Percent_Identity=24.8979591836735, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1789586, Length=219, Percent_Identity=22.3744292237443, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1788506, Length=236, Percent_Identity=27.5423728813559, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI87082267, Length=230, Percent_Identity=25.2173913043478, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1789891, Length=219, Percent_Identity=27.3972602739726, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787548, Length=225, Percent_Identity=26.2222222222222, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787972, Length=225, Percent_Identity=27.5555555555556, Blast_Score=61, Evalue=6e-11, Organism=Escherichia coli, GI1788644, Length=210, Percent_Identity=26.6666666666667, Blast_Score=61, Evalue=7e-11, Organism=Escherichia coli, GI1787758, Length=217, Percent_Identity=24.4239631336406, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17565586, Length=217, Percent_Identity=31.7972350230415, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71983523, Length=207, Percent_Identity=30.4347826086957, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI71983510, Length=207, Percent_Identity=30.4347826086957, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI71983516, Length=207, Percent_Identity=30.4347826086957, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17510237, Length=207, Percent_Identity=31.4009661835749, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI115533608, Length=193, Percent_Identity=29.5336787564767, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17539902, Length=218, Percent_Identity=25.6880733944954, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17567269, Length=210, Percent_Identity=29.0476190476191, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17567265, Length=210, Percent_Identity=27.6190476190476, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI24643674, Length=226, Percent_Identity=31.4159292035398, Blast_Score=99, Evalue=2e-21, Organism=Drosophila melanogaster, GI116007184, Length=217, Percent_Identity=26.7281105990783, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI221500365, Length=217, Percent_Identity=26.7281105990783, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI116007328, Length=205, Percent_Identity=27.8048780487805, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI28574150, Length=205, Percent_Identity=27.8048780487805, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24648314, Length=225, Percent_Identity=26.6666666666667, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24666092, Length=216, Percent_Identity=27.3148148148148, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI221512771, Length=225, Percent_Identity=27.5555555555556, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI85726357, Length=210, Percent_Identity=27.1428571428571, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI19920532, Length=215, Percent_Identity=26.5116279069767, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24580930, Length=215, Percent_Identity=26.5116279069767, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574533, Length=211, Percent_Identity=29.8578199052133, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI28571209, Length=214, Percent_Identity=25.2336448598131, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI28574744, Length=230, Percent_Identity=26.5217391304348, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 27832; Mature: 27701
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNHNEALLVANKITRRFGGLVANQDVCVDLIRGKVHVLLGPNGAGKSTCINMLSGDLP CCCCCCCEEEEHHHHHHHHCCEECCCHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCC PSDGQILFMGKDITGLTAAQRSLVGIGRSYQRTNIFPKFTVLESVRLAAQSRNQQPWRIF CCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCCHHHH SKAQEQKWALDKARACIEEAGLGKKVDWVSGVLSHGEQRQLEIAMVLATDAQVMLLDEPL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEECCC AGMGSDESAKMVEVLKRLKPTRAILLVEHDMDAVFAVADTITVMVNGQVLESGPPAQIKA CCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCEEEEEEECEEECCCCCCCEEH SVAVQQAYLGSEDSFHV HHHHHHHHCCCCCCCCC >Mature Secondary Structure SDNHNEALLVANKITRRFGGLVANQDVCVDLIRGKVHVLLGPNGAGKSTCINMLSGDLP CCCCCCEEEEHHHHHHHHCCEECCCHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCCC PSDGQILFMGKDITGLTAAQRSLVGIGRSYQRTNIFPKFTVLESVRLAAQSRNQQPWRIF CCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCCHHHH SKAQEQKWALDKARACIEEAGLGKKVDWVSGVLSHGEQRQLEIAMVLATDAQVMLLDEPL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEECCC AGMGSDESAKMVEVLKRLKPTRAILLVEHDMDAVFAVADTITVMVNGQVLESGPPAQIKA CCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCEEEEEEECEEECCCCCCCEEH SVAVQQAYLGSEDSFHV HHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]