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The map label for this gene is yejH [H]

Identifier: 71908308

GI number: 71908308

Start: 2890657

End: 2892171

Strand: Reverse

Name: yejH [H]

Synonym: Daro_2695

Alternate gene names: 71908308

Gene position: 2892171-2890657 (Counterclockwise)

Preceding gene: 71908309

Following gene: 71908307

Centisome position: 64.25

GC content: 54.79

Gene sequence:

>1515_bases
ATGATGTTTAACCTTCGACCGTACCAACAATCCGCCGAACACAAAGCACGCCTTGCCCTGGCTAGGGGTTTGAAAAGGAT
CGCTCTTTATTTGCCGACAGGTGGTGGAAAGACACTGACCGCGACAAGCATCATCATCAAGGCTGTGGCCAAGGGGAGGA
AGGTTGTATTTCTCGCGAACCGGAAACAGTTGGTTAATCAGACCAGCGCCGTCCTGTATCGCTACGGCATTCCTCACGGC
ATCCTCCAAGCTGAGAACACCGCCCGGATTCATGAGCAGGTTCTGGTGGCTAGTATCGACACGGTTCATGTGCGTGGCCT
GCCTGACGATGTTGGTCTGTTGATCATCGATGAGGCCCATGGTGTGGCTGGCAGCGAGAAGTACCGGAAACTGCTGATCA
CCTACAACAATGTTCCGGCAGTCGGTCTGACCGCTACGCCGTTCGCTGTTGGGATGGGCAAGCACTATGACGAACTTGGC
GGCTCCCTGTTTCAAGAGCTTGTTGTTGGCGCCACGATCAAGGAATTGATTGATGCCGAGTATCTGGTCGACGTCGATAT
TTATGCGCCATCCGAGCCGGACATGAAGGGGGTAAAAAGCACCAAAGGACTTGATGGTCTTCTCGATTACAACCAGTCAG
AATTAGAGGACGCAGCCGATAAGCCCGAGTTGATCGGCGACATTGTTGGGCATTGGTTCAAGCTGGCTCGTGGCAAACAG
ACCGTTTGCTTTGCAACGAGCATTCCGCACAGCAAGCACATCGTCGAACAGTTTCAGGCCGCCGGCGTCGCTGCTGAACA
TATCGACTATCACGCCGATGATGATGAACGTGCCGCCATCCTGGGGCGATTCGCACACGGTGAAACCATGGTGCTGTCGA
ACGTGGCCTTGCTTGCTGAAGGATGGGATTGCCCAGCTACCGAGGTGATGATTCTGGCTCGCCCGACGCGTTCGCTGATC
CGCTTTATCCAGATGGTCGGTCGAATCCTGCGACCGGCAGATGGAAAGATCAAAGCGTTGTTGCTCGACCATTCTGGCAG
CACTGCTCGGTTGGGGCATCCCTGTGATGATCTCCCGCTTGAGTTGGATGATGGAAAGCCGAAAGCATCTTCCACGGAGA
AAAAGGAGCGTGCCGAATCGCTGCCGAAAGCGTGCCCGTTCTGCAAGTTCATGCGTCCTGCTGGCGTCCATGCTTGCCCC
GCCTGTGGCAAAGCGCCTGAGCGTCAATCTGATGTTGTGGTGGGTGATGGCGACTTGGTGAAGATGGATCGAAAGAAGCC
AATCAAGCGGGAAACCGGACAGTGGATATACAGCCAATTGCTCGGCTACGCTAAATCCAAGGGCTACAAATCCGGATGGG
CATTCCACAAGTATTTCGAATTCACCGGCAAGGAAGCCCGTGGTCTACGTCAGGTCATCGCTGTGCCAACTGCCGAAATC
CTCGGGTGGATCAAGTCTCGCCAGATTGCCGCAGCCAAGGCTAAGGAGAAGCAAGGAGGGCATCATGCGACCTAA

Upstream 100 bases:

>100_bases
CCGTTAAAACCTTCCCTAGCCAAGGCAGAGCCTGTTGTTGTCGATGGCGAATTAGGTGCGCTGGTAGCTGCTGCTGAATC
GTCTTTTGCGAGGGGCAGCG

Downstream 100 bases:

>100_bases
TGTCCGCGAGATTGCCACCGGGAAATGGCGAGGCCTTCTGCTCGGCTTTGGTTTGACTGAGCGCCAGCTTTCCGGAAAAC
ATTGTTCTTGTCCGATCTGT

Product: helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MMFNLRPYQQSAEHKARLALARGLKRIALYLPTGGGKTLTATSIIIKAVAKGRKVVFLANRKQLVNQTSAVLYRYGIPHG
ILQAENTARIHEQVLVASIDTVHVRGLPDDVGLLIIDEAHGVAGSEKYRKLLITYNNVPAVGLTATPFAVGMGKHYDELG
GSLFQELVVGATIKELIDAEYLVDVDIYAPSEPDMKGVKSTKGLDGLLDYNQSELEDAADKPELIGDIVGHWFKLARGKQ
TVCFATSIPHSKHIVEQFQAAGVAAEHIDYHADDDERAAILGRFAHGETMVLSNVALLAEGWDCPATEVMILARPTRSLI
RFIQMVGRILRPADGKIKALLLDHSGSTARLGHPCDDLPLELDDGKPKASSTEKKERAESLPKACPFCKFMRPAGVHACP
ACGKAPERQSDVVVGDGDLVKMDRKKPIKRETGQWIYSQLLGYAKSKGYKSGWAFHKYFEFTGKEARGLRQVIAVPTAEI
LGWIKSRQIAAAKAKEKQGGHHAT

Sequences:

>Translated_504_residues
MMFNLRPYQQSAEHKARLALARGLKRIALYLPTGGGKTLTATSIIIKAVAKGRKVVFLANRKQLVNQTSAVLYRYGIPHG
ILQAENTARIHEQVLVASIDTVHVRGLPDDVGLLIIDEAHGVAGSEKYRKLLITYNNVPAVGLTATPFAVGMGKHYDELG
GSLFQELVVGATIKELIDAEYLVDVDIYAPSEPDMKGVKSTKGLDGLLDYNQSELEDAADKPELIGDIVGHWFKLARGKQ
TVCFATSIPHSKHIVEQFQAAGVAAEHIDYHADDDERAAILGRFAHGETMVLSNVALLAEGWDCPATEVMILARPTRSLI
RFIQMVGRILRPADGKIKALLLDHSGSTARLGHPCDDLPLELDDGKPKASSTEKKERAESLPKACPFCKFMRPAGVHACP
ACGKAPERQSDVVVGDGDLVKMDRKKPIKRETGQWIYSQLLGYAKSKGYKSGWAFHKYFEFTGKEARGLRQVIAVPTAEI
LGWIKSRQIAAAKAKEKQGGHHAT
>Mature_504_residues
MMFNLRPYQQSAEHKARLALARGLKRIALYLPTGGGKTLTATSIIIKAVAKGRKVVFLANRKQLVNQTSAVLYRYGIPHG
ILQAENTARIHEQVLVASIDTVHVRGLPDDVGLLIIDEAHGVAGSEKYRKLLITYNNVPAVGLTATPFAVGMGKHYDELG
GSLFQELVVGATIKELIDAEYLVDVDIYAPSEPDMKGVKSTKGLDGLLDYNQSELEDAADKPELIGDIVGHWFKLARGKQ
TVCFATSIPHSKHIVEQFQAAGVAAEHIDYHADDDERAAILGRFAHGETMVLSNVALLAEGWDCPATEVMILARPTRSLI
RFIQMVGRILRPADGKIKALLLDHSGSTARLGHPCDDLPLELDDGKPKASSTEKKERAESLPKACPFCKFMRPAGVHACP
ACGKAPERQSDVVVGDGDLVKMDRKKPIKRETGQWIYSQLLGYAKSKGYKSGWAFHKYFEFTGKEARGLRQVIAVPTAEI
LGWIKSRQIAAAKAKEKQGGHHAT

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788511, Length=417, Percent_Identity=29.4964028776978, Blast_Score=123, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6320539, Length=392, Percent_Identity=29.3367346938776, Blast_Score=117, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 55078; Mature: 55078

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFNLRPYQQSAEHKARLALARGLKRIALYLPTGGGKTLTATSIIIKAVAKGRKVVFLAN
CCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEHHHHHHHHHHHCCCEEEEEEC
RKQLVNQTSAVLYRYGIPHGILQAENTARIHEQVLVASIDTVHVRGLPDDVGLLIIDEAH
HHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHEECEEEECCCCCCCCEEEEECCC
GVAGSEKYRKLLITYNNVPAVGLTATPFAVGMGKHYDELGGSLFQELVVGATIKELIDAE
CCCCCHHHEEEEEEECCCCCCCEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
YLVDVDIYAPSEPDMKGVKSTKGLDGLLDYNQSELEDAADKPELIGDIVGHWFKLARGKQ
EEEEEEEECCCCCCCCCCHHCCCCCHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
TVCFATSIPHSKHIVEQFQAAGVAAEHIDYHADDDERAAILGRFAHGETMVLSNVALLAE
EEEEEECCCCHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHEEC
GWDCPATEVMILARPTRSLIRFIQMVGRILRPADGKIKALLLDHSGSTARLGHPCDDLPL
CCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCE
ELDDGKPKASSTEKKERAESLPKACPFCKFMRPAGVHACPACGKAPERQSDVVVGDGDLV
EECCCCCCCCCCHHHHHHHHCHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEE
KMDRKKPIKRETGQWIYSQLLGYAKSKGYKSGWAFHKYFEFTGKEARGLRQVIAVPTAEI
ECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHH
LGWIKSRQIAAAKAKEKQGGHHAT
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMFNLRPYQQSAEHKARLALARGLKRIALYLPTGGGKTLTATSIIIKAVAKGRKVVFLAN
CCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCEEHHHHHHHHHHHCCCEEEEEEC
RKQLVNQTSAVLYRYGIPHGILQAENTARIHEQVLVASIDTVHVRGLPDDVGLLIIDEAH
HHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHEECEEEECCCCCCCCEEEEECCC
GVAGSEKYRKLLITYNNVPAVGLTATPFAVGMGKHYDELGGSLFQELVVGATIKELIDAE
CCCCCHHHEEEEEEECCCCCCCEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
YLVDVDIYAPSEPDMKGVKSTKGLDGLLDYNQSELEDAADKPELIGDIVGHWFKLARGKQ
EEEEEEEECCCCCCCCCCHHCCCCCHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
TVCFATSIPHSKHIVEQFQAAGVAAEHIDYHADDDERAAILGRFAHGETMVLSNVALLAE
EEEEEECCCCHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHEEC
GWDCPATEVMILARPTRSLIRFIQMVGRILRPADGKIKALLLDHSGSTARLGHPCDDLPL
CCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCE
ELDDGKPKASSTEKKERAESLPKACPFCKFMRPAGVHACPACGKAPERQSDVVVGDGDLV
EECCCCCCCCCCHHHHHHHHCHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCEE
KMDRKKPIKRETGQWIYSQLLGYAKSKGYKSGWAFHKYFEFTGKEARGLRQVIAVPTAEI
ECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHH
LGWIKSRQIAAAKAKEKQGGHHAT
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]