| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71908305
Identifier: 71908305
GI number: 71908305
Start: 2887222
End: 2889300
Strand: Reverse
Name: 71908305
Synonym: Daro_2692
Alternate gene names: NA
Gene position: 2889300-2887222 (Counterclockwise)
Preceding gene: 71908306
Following gene: 71908304
Centisome position: 64.19
GC content: 58.39
Gene sequence:
>2079_bases ATGGCCGCTAAGAAACTCAGAATCAAGACTCAGCCCCGAAATTTCTCCTTGGGTGGTGCCATTGGCGCTCCGGCTATTGA CCCCAACGGTAGCGACTACGATGCCATCAATGCCGAGAAAACGGCGCGCTGGGCAGCAGAAGATGCAGCAAAAGCGGCCA AATACGGCATCAAATCCGATGTGACTCCACTGGCTGAGCGTCCGACCAGTCCTGTGTCCACTTCTCTAGCTTCCATGGCC ATGCAGCAGCCCGGCCAGACGACTTGGCAGCAGGACATGGATGCTCGTCAAAATCGGATCGCTGGCTACACCGACAAGCT CCGCGGGATGGAGCAAGCAGGGCGCGCCAATAGTCTGATGGGCTCTAGTTCAAGCATTTCAACCGGCTATGAGAATGGCG GAAAGATTGATGCCGAAGAACTGATGCGTCAGATGACCGCTAAGTATGGCGCACCAGCCGCTGGCCCCTCTACCCAGCCC CCAGTTCAGCAAGTACCGCAACAACCGAAACAACAACCGCCAGTTCAACCCCAGCCCCAAGGCATTGTTGGCATCATCAA GAATCGTGGCGTGCAGATCGACAAGGCAGTGAATGGTTACGCCCGAGGTGGCAAGCCCCGAGGTATTGCCATGGAAGCCC TTGGTGATCGATTAGGTGAGGGCGCCAGTGAGATCAAAGGCCCTGGCACGGCAAGCTCTGACAGCATCCCGGCAGTGGTT GGCGGAACAGGGGAACCAATCAGGGTAGCGAACGGCGAGCGCATCGTCAGTGTTGCGCAAGATCGATTCCTTGAGCGATA CGCCCGTGCCAAAGGCTTTGAGAGCCTGGATGCCATGCTCGAAGAAGGCACCGGCAAACCCGTTGGCCCGACCATCAAAG CCGGGAAACGCGCTGCGGCTGATGGCATGCAGCCTGCCAACTACCGGCCAGAAATCAATGGTCTGACTTGGGACGACAAG CGCTTTGATCCGACCAAGGAGCAGATGGCTCAGGGAACCGGCGCTATCGCTATCAAGACCGGCCCGAACGCCGGCAAAAA CATCGCTATCGGCCCGCAGAACTACACGGCTGCAGATGGATCATCGACTAGCGACTGGAGCAAAACCGCGCAATACGCTC AAGGCTTGGCCCAAGCCCAGAAGGATCGCGACACGCTGGCAACAATGCAGCGTGATCGCCTGGAACGCGATGCCTACGAT CCCTCGATTACCGATCCAAATGTGCAGTCAAACGCTCGTGCGCAGATCGTTGAACAGGATGCCAAAGCCGCCAAGTTTGG CGAGGCTCAGGGCCGTATGCTGGATAACCAGCTCAAGCACACAAAGCTTGCGAGTGAGGGCGCAATGGCAGGGCTTCAAG CGCAATACCTTGCTGAAACTGATCCGACCCGGCGAAGCCAACTTGCCGAACAGATCAGGGGCATTAATGGTAAGGGGGAC GGTGCCCAGCAGTGGCAGCACGTCGAGACCGAGCGCGGCATGATGGCCTTTAACCCGAAAACCCTCCGCATGGAACCGAT TAGCGGGCCTGACGGCGCACCAGTGATGGGTAACAAGCCCCTGACCGAGTTTCAGGGCAAATCAACCGGGTTTGGCATGC GCGCTGAGAACGCCAGCGGGATCATCGATCAAGTCGGCAAGAACGGCGCGGTTCAGCCTAGCCTCTTGAAACGTGCCGTT GAGGATGTGCCGCTAGTAGGCGGTGGCCTCGGGATGCTTGCCAACAAAACCCAGTCACCGGAGCAGCAACAGATCGAACA GGCGCAGCGCGATTTTGTGAATGCGGTACTTCGTCAGGAGTCCGGTGCAGCGATTAGCAAGAGCGAATTCGATAACGCCA AGCTCCAGTATTTCCCGCAGCCCGGAGATAGCCCGAAAGTCATTGCGCAGAAGAAAGCCAACCGCGAAATGGCGGTCAAT GGCTTCCGCATCTCTGCAGGGCCTGGGGCAAAGAACTTCGGCGGAGCGCCAGCGCAACCCCAACAACCAGGAGCGCCCAA GGTGGGCATGGTTGAGGGTGGCCATGTCTATCTCGGTGGCAATCCAGCCGACCCGGCAAGCTGGAAGGCGGTGCAGTGA
Upstream 100 bases:
>100_bases GAGCTTGGCGACGTAGCAGGGCTGCGCATCACCTGGGGCCATTTTCGCCAGCTTTGGCAGCGAATCAGGAAAACCACTCA CGAATTTAGCGAGGTGCCAG
Downstream 100 bases:
>100_bases TGGCCGGCCCATGGGAAAAGTATGCTTCACCGGATCAGCCCTCATCACCAACGGCAGCACCATCGGCAGATGGTCCGTGG TCAAAGTATTCGTCAGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 692; Mature: 691
Protein sequence:
>692_residues MAAKKLRIKTQPRNFSLGGAIGAPAIDPNGSDYDAINAEKTARWAAEDAAKAAKYGIKSDVTPLAERPTSPVSTSLASMA MQQPGQTTWQQDMDARQNRIAGYTDKLRGMEQAGRANSLMGSSSSISTGYENGGKIDAEELMRQMTAKYGAPAAGPSTQP PVQQVPQQPKQQPPVQPQPQGIVGIIKNRGVQIDKAVNGYARGGKPRGIAMEALGDRLGEGASEIKGPGTASSDSIPAVV GGTGEPIRVANGERIVSVAQDRFLERYARAKGFESLDAMLEEGTGKPVGPTIKAGKRAAADGMQPANYRPEINGLTWDDK RFDPTKEQMAQGTGAIAIKTGPNAGKNIAIGPQNYTAADGSSTSDWSKTAQYAQGLAQAQKDRDTLATMQRDRLERDAYD PSITDPNVQSNARAQIVEQDAKAAKFGEAQGRMLDNQLKHTKLASEGAMAGLQAQYLAETDPTRRSQLAEQIRGINGKGD GAQQWQHVETERGMMAFNPKTLRMEPISGPDGAPVMGNKPLTEFQGKSTGFGMRAENASGIIDQVGKNGAVQPSLLKRAV EDVPLVGGGLGMLANKTQSPEQQQIEQAQRDFVNAVLRQESGAAISKSEFDNAKLQYFPQPGDSPKVIAQKKANREMAVN GFRISAGPGAKNFGGAPAQPQQPGAPKVGMVEGGHVYLGGNPADPASWKAVQ
Sequences:
>Translated_692_residues MAAKKLRIKTQPRNFSLGGAIGAPAIDPNGSDYDAINAEKTARWAAEDAAKAAKYGIKSDVTPLAERPTSPVSTSLASMA MQQPGQTTWQQDMDARQNRIAGYTDKLRGMEQAGRANSLMGSSSSISTGYENGGKIDAEELMRQMTAKYGAPAAGPSTQP PVQQVPQQPKQQPPVQPQPQGIVGIIKNRGVQIDKAVNGYARGGKPRGIAMEALGDRLGEGASEIKGPGTASSDSIPAVV GGTGEPIRVANGERIVSVAQDRFLERYARAKGFESLDAMLEEGTGKPVGPTIKAGKRAAADGMQPANYRPEINGLTWDDK RFDPTKEQMAQGTGAIAIKTGPNAGKNIAIGPQNYTAADGSSTSDWSKTAQYAQGLAQAQKDRDTLATMQRDRLERDAYD PSITDPNVQSNARAQIVEQDAKAAKFGEAQGRMLDNQLKHTKLASEGAMAGLQAQYLAETDPTRRSQLAEQIRGINGKGD GAQQWQHVETERGMMAFNPKTLRMEPISGPDGAPVMGNKPLTEFQGKSTGFGMRAENASGIIDQVGKNGAVQPSLLKRAV EDVPLVGGGLGMLANKTQSPEQQQIEQAQRDFVNAVLRQESGAAISKSEFDNAKLQYFPQPGDSPKVIAQKKANREMAVN GFRISAGPGAKNFGGAPAQPQQPGAPKVGMVEGGHVYLGGNPADPASWKAVQ >Mature_691_residues AAKKLRIKTQPRNFSLGGAIGAPAIDPNGSDYDAINAEKTARWAAEDAAKAAKYGIKSDVTPLAERPTSPVSTSLASMAM QQPGQTTWQQDMDARQNRIAGYTDKLRGMEQAGRANSLMGSSSSISTGYENGGKIDAEELMRQMTAKYGAPAAGPSTQPP VQQVPQQPKQQPPVQPQPQGIVGIIKNRGVQIDKAVNGYARGGKPRGIAMEALGDRLGEGASEIKGPGTASSDSIPAVVG GTGEPIRVANGERIVSVAQDRFLERYARAKGFESLDAMLEEGTGKPVGPTIKAGKRAAADGMQPANYRPEINGLTWDDKR FDPTKEQMAQGTGAIAIKTGPNAGKNIAIGPQNYTAADGSSTSDWSKTAQYAQGLAQAQKDRDTLATMQRDRLERDAYDP SITDPNVQSNARAQIVEQDAKAAKFGEAQGRMLDNQLKHTKLASEGAMAGLQAQYLAETDPTRRSQLAEQIRGINGKGDG AQQWQHVETERGMMAFNPKTLRMEPISGPDGAPVMGNKPLTEFQGKSTGFGMRAENASGIIDQVGKNGAVQPSLLKRAVE DVPLVGGGLGMLANKTQSPEQQQIEQAQRDFVNAVLRQESGAAISKSEFDNAKLQYFPQPGDSPKVIAQKKANREMAVNG FRISAGPGAKNFGGAPAQPQQPGAPKVGMVEGGHVYLGGNPADPASWKAVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73249; Mature: 73118
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKKLRIKTQPRNFSLGGAIGAPAIDPNGSDYDAINAEKTARWAAEDAAKAAKYGIKSD CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC VTPLAERPTSPVSTSLASMAMQQPGQTTWQQDMDARQNRIAGYTDKLRGMEQAGRANSLM CCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHC GSSSSISTGYENGGKIDAEELMRQMTAKYGAPAAGPSTQPPVQQVPQQPKQQPPVQPQPQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC GIVGIIKNRGVQIDKAVNGYARGGKPRGIAMEALGDRLGEGASEIKGPGTASSDSIPAVV CEEEHECCCCEEEHHHHCHHHCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEE GGTGEPIRVANGERIVSVAQDRFLERYARAKGFESLDAMLEEGTGKPVGPTIKAGKRAAA CCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHCCCHHHH DGMQPANYRPEINGLTWDDKRFDPTKEQMAQGTGAIAIKTGPNAGKNIAIGPQNYTAADG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCCC SSTSDWSKTAQYAQGLAQAQKDRDTLATMQRDRLERDAYDPSITDPNVQSNARAQIVEQD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH AKAAKFGEAQGRMLDNQLKHTKLASEGAMAGLQAQYLAETDPTRRSQLAEQIRGINGKGD HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCCCCC GAQQWQHVETERGMMAFNPKTLRMEPISGPDGAPVMGNKPLTEFQGKSTGFGMRAENASG CHHHHHHHHHHCCEEEECCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCH IIDQVGKNGAVQPSLLKRAVEDVPLVGGGLGMLANKTQSPEQQQIEQAQRDFVNAVLRQE HHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC SGAAISKSEFDNAKLQYFPQPGDSPKVIAQKKANREMAVNGFRISAGPGAKNFGGAPAQP CCCCCCHHCCCCCCEEEECCCCCCCHHHHHHHCCCCEEECCEEEECCCCCCCCCCCCCCC QQPGAPKVGMVEGGHVYLGGNPADPASWKAVQ CCCCCCCCEEEECCEEEECCCCCCCCCCCCCC >Mature Secondary Structure AAKKLRIKTQPRNFSLGGAIGAPAIDPNGSDYDAINAEKTARWAAEDAAKAAKYGIKSD CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC VTPLAERPTSPVSTSLASMAMQQPGQTTWQQDMDARQNRIAGYTDKLRGMEQAGRANSLM CCHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHC GSSSSISTGYENGGKIDAEELMRQMTAKYGAPAAGPSTQPPVQQVPQQPKQQPPVQPQPQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC GIVGIIKNRGVQIDKAVNGYARGGKPRGIAMEALGDRLGEGASEIKGPGTASSDSIPAVV CEEEHECCCCEEEHHHHCHHHCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEE GGTGEPIRVANGERIVSVAQDRFLERYARAKGFESLDAMLEEGTGKPVGPTIKAGKRAAA CCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHCCCHHHH DGMQPANYRPEINGLTWDDKRFDPTKEQMAQGTGAIAIKTGPNAGKNIAIGPQNYTAADG CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCCC SSTSDWSKTAQYAQGLAQAQKDRDTLATMQRDRLERDAYDPSITDPNVQSNARAQIVEQD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH AKAAKFGEAQGRMLDNQLKHTKLASEGAMAGLQAQYLAETDPTRRSQLAEQIRGINGKGD HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHCCCCCCC GAQQWQHVETERGMMAFNPKTLRMEPISGPDGAPVMGNKPLTEFQGKSTGFGMRAENASG CHHHHHHHHHHCCEEEECCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCH IIDQVGKNGAVQPSLLKRAVEDVPLVGGGLGMLANKTQSPEQQQIEQAQRDFVNAVLRQE HHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC SGAAISKSEFDNAKLQYFPQPGDSPKVIAQKKANREMAVNGFRISAGPGAKNFGGAPAQP CCCCCCHHCCCCCCEEEECCCCCCCHHHHHHHCCCCEEECCEEEECCCCCCCCCCCCCCC QQPGAPKVGMVEGGHVYLGGNPADPASWKAVQ CCCCCCCCEEEECCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA