| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71908202
Identifier: 71908202
GI number: 71908202
Start: 2790022
End: 2790393
Strand: Reverse
Name: 71908202
Synonym: Daro_2588
Alternate gene names: NA
Gene position: 2790393-2790022 (Counterclockwise)
Preceding gene: 71908203
Following gene: 71908201
Centisome position: 61.99
GC content: 48.92
Gene sequence:
>372_bases TTGTTAAAGGAATCTAACGTGCCCCTTAAACGCATCTTTCAATCTTCTGATTTTGTGCAACCCACGATGGATGAAGAACC TAAGCGATCGATCATTACCGAATCCGCTGACGCTGTCGTTGTTATGTGGCACCTGCTTCCGGGGCAGCGCATTCGACCTC ACGTTCATCCTGACGGACAGGACACATGGATTGTTATTTCTGGTAGCGGAGAATATTCATTCGACGAGGGAAAAGCGACC ACGCCAATAGCCTGTGGACAAATTGTGGTGGCGCACTTAGGGCAGGTGCACGGTGTCCTCAATAACACCAACGAGCCACT TCAAATTCTTTCGGTTGTTTCTCCGGCGGATGCAGGTTATTTTTTGGTCTGA
Upstream 100 bases:
>100_bases AAATTCATTGCTGCGCTGGTAGCCTTTTAGAAGCAATGGATTCCGATTTAAACGTGATACTTACGTTACCGTCCGACGAA ACCCTCCAAAATTTGCTACT
Downstream 100 bases:
>100_bases GGTGCGGCTAGCATGAATTTAACTTGTGAAGCCAAAATTCCAATCTATGTTGTTCGGTTTTGATTGAACACAGAAAATAG AATATGAAAATAGATCGGCC
Product: cupin region
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MLKESNVPLKRIFQSSDFVQPTMDEEPKRSIITESADAVVVMWHLLPGQRIRPHVHPDGQDTWIVISGSGEYSFDEGKAT TPIACGQIVVAHLGQVHGVLNNTNEPLQILSVVSPADAGYFLV
Sequences:
>Translated_123_residues MLKESNVPLKRIFQSSDFVQPTMDEEPKRSIITESADAVVVMWHLLPGQRIRPHVHPDGQDTWIVISGSGEYSFDEGKAT TPIACGQIVVAHLGQVHGVLNNTNEPLQILSVVSPADAGYFLV >Mature_123_residues MLKESNVPLKRIFQSSDFVQPTMDEEPKRSIITESADAVVVMWHLLPGQRIRPHVHPDGQDTWIVISGSGEYSFDEGKAT TPIACGQIVVAHLGQVHGVLNNTNEPLQILSVVSPADAGYFLV
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13475; Mature: 13475
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKESNVPLKRIFQSSDFVQPTMDEEPKRSIITESADAVVVMWHLLPGQRIRPHVHPDGQ CCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCC DTWIVISGSGEYSFDEGKATTPIACGQIVVAHLGQVHGVLNNTNEPLQILSVVSPADAGY CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCE FLV EEC >Mature Secondary Structure MLKESNVPLKRIFQSSDFVQPTMDEEPKRSIITESADAVVVMWHLLPGQRIRPHVHPDGQ CCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCC DTWIVISGSGEYSFDEGKATTPIACGQIVVAHLGQVHGVLNNTNEPLQILSVVSPADAGY CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCE FLV EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA