| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71908144
Identifier: 71908144
GI number: 71908144
Start: 2724821
End: 2725786
Strand: Reverse
Name: 71908144
Synonym: Daro_2528
Alternate gene names: NA
Gene position: 2725786-2724821 (Counterclockwise)
Preceding gene: 71908145
Following gene: 71908143
Centisome position: 60.56
GC content: 63.46
Gene sequence:
>966_bases GTGCGGATCAGGAGGATATCCATGGATCAGAAAGACTTTCGGGTTATCCACGGCTGGGTGGACGACATAGTGCGCGATCA TGCGCGCAGCGGGTATCGGCTGCTAGTTAGGCAGGACGAGTGGCAAGTGGCCGATCTCGCTTTGGATCAGCTGCTTTGTT CGATGAAGCTTGAGGACGAGGTGAGCGTGGTGGTCGCAAGCACGCGACCTGGCCGCGTGTTGGTTCTTGTCGACCGCACG ACGGGCGAGGGGGCGAACTTCGTTCGCGAAGGAATACGGCGGTGGCCTGGCGAAGGTGACCTGCTGGTGATCTTGGCGAC CGCCGGATACTTCACGATCGCCTTGGGGTGGATGGCCCTGCCAGCCTTGCTGTGCTTCGTGCTGCTTTACTGGCTGGTGA CGCACCGAATCCCCGAGGCGAAGCGACGGCGCGCCACGACACGAATTGACTACTTGATCGACCGGGAGTATTGCCGCTGG CACGCGATGCGGACCCGGCAGGGGGGGGCGGTGAGAGCCAATCGCCGGCCACGCTCCGGCCGGCGCGAGCGTGTCAGCGC ATCGAAGCTTGCCCAGATGGGTGTCTGTGAGCGTCTGGTGCTATTCGAGTATCGTTATGGTCAGCGGCGCTCCGCCCAAC AGCGAAAGGACATGGCTCGAGGGGGCCGAGAGCACCGGTGTTTCTTTCGGGAAGGACAGGTGCAGCCTATCCGCAAGGGG CCGTGCTTTATCGCCACCCTCGTCTATGGCGAGGGGCGTGAGGTCTCGGCACTGCGCTTGTTTCGCGATCGGGTACTGCG TCGCTCGATGCTTGGCCGAGGTGTGATCCTAGCCTACTACCGTGCGGCACCGGCCGTGTGCCGGATACTCGCGGGGCATC CGTGGCTGATTCGGGCGATGCGTGCGCTGCTTCGCCCTGCTATCTGGATGGCGGCAGGGTTGGAGAGGTGGAGGGGAGGG CGATGA
Upstream 100 bases:
>100_bases GCGAACAGCACCGCCGCCGAGTTGCCGACGGTGCCAGCGATCGCCATGCCGTTCGCCTCTGAGGTATTCGGCGAACCAAT CACCGATCGTTGATCCAGCA
Downstream 100 bases:
>100_bases TTGAGTTGATGATCGCTGGTGCCGTCTTGATCCTCTTGCTCATCTGGGTACTTTGTCGTCTGGAGCGCCAAGGGGATCAA ACTTGGTTACCGCGGGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MRIRRISMDQKDFRVIHGWVDDIVRDHARSGYRLLVRQDEWQVADLALDQLLCSMKLEDEVSVVVASTRPGRVLVLVDRT TGEGANFVREGIRRWPGEGDLLVILATAGYFTIALGWMALPALLCFVLLYWLVTHRIPEAKRRRATTRIDYLIDREYCRW HAMRTRQGGAVRANRRPRSGRRERVSASKLAQMGVCERLVLFEYRYGQRRSAQQRKDMARGGREHRCFFREGQVQPIRKG PCFIATLVYGEGREVSALRLFRDRVLRRSMLGRGVILAYYRAAPAVCRILAGHPWLIRAMRALLRPAIWMAAGLERWRGG R
Sequences:
>Translated_321_residues MRIRRISMDQKDFRVIHGWVDDIVRDHARSGYRLLVRQDEWQVADLALDQLLCSMKLEDEVSVVVASTRPGRVLVLVDRT TGEGANFVREGIRRWPGEGDLLVILATAGYFTIALGWMALPALLCFVLLYWLVTHRIPEAKRRRATTRIDYLIDREYCRW HAMRTRQGGAVRANRRPRSGRRERVSASKLAQMGVCERLVLFEYRYGQRRSAQQRKDMARGGREHRCFFREGQVQPIRKG PCFIATLVYGEGREVSALRLFRDRVLRRSMLGRGVILAYYRAAPAVCRILAGHPWLIRAMRALLRPAIWMAAGLERWRGG R >Mature_321_residues MRIRRISMDQKDFRVIHGWVDDIVRDHARSGYRLLVRQDEWQVADLALDQLLCSMKLEDEVSVVVASTRPGRVLVLVDRT TGEGANFVREGIRRWPGEGDLLVILATAGYFTIALGWMALPALLCFVLLYWLVTHRIPEAKRRRATTRIDYLIDREYCRW HAMRTRQGGAVRANRRPRSGRRERVSASKLAQMGVCERLVLFEYRYGQRRSAQQRKDMARGGREHRCFFREGQVQPIRKG PCFIATLVYGEGREVSALRLFRDRVLRRSMLGRGVILAYYRAAPAVCRILAGHPWLIRAMRALLRPAIWMAAGLERWRGG R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37216; Mature: 37216
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRRISMDQKDFRVIHGWVDDIVRDHARSGYRLLVRQDEWQVADLALDQLLCSMKLEDE CCCEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCC VSVVVASTRPGRVLVLVDRTTGEGANFVREGIRRWPGEGDLLVILATAGYFTIALGWMAL EEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHH PALLCFVLLYWLVTHRIPEAKRRRATTRIDYLIDREYCRWHAMRTRQGGAVRANRRPRSG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC RRERVSASKLAQMGVCERLVLFEYRYGQRRSAQQRKDMARGGREHRCFFREGQVQPIRKG HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC PCFIATLVYGEGREVSALRLFRDRVLRRSMLGRGVILAYYRAAPAVCRILAGHPWLIRAM CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHH RALLRPAIWMAAGLERWRGGR HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRIRRISMDQKDFRVIHGWVDDIVRDHARSGYRLLVRQDEWQVADLALDQLLCSMKLEDE CCCEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCC VSVVVASTRPGRVLVLVDRTTGEGANFVREGIRRWPGEGDLLVILATAGYFTIALGWMAL EEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHH PALLCFVLLYWLVTHRIPEAKRRRATTRIDYLIDREYCRWHAMRTRQGGAVRANRRPRSG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCC RRERVSASKLAQMGVCERLVLFEYRYGQRRSAQQRKDMARGGREHRCFFREGQVQPIRKG HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC PCFIATLVYGEGREVSALRLFRDRVLRRSMLGRGVILAYYRAAPAVCRILAGHPWLIRAM CEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHH RALLRPAIWMAAGLERWRGGR HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA