| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71908122
Identifier: 71908122
GI number: 71908122
Start: 2705014
End: 2705454
Strand: Reverse
Name: 71908122
Synonym: Daro_2506
Alternate gene names: NA
Gene position: 2705454-2705014 (Counterclockwise)
Preceding gene: 71908124
Following gene: 71908120
Centisome position: 60.11
GC content: 56.46
Gene sequence:
>441_bases ATGGTGCTTTTCCTAGCTGTGTGTATCACTGCTGTATCCCTACGCCTGTTCCTTCAGGGCTCCCAAGCTTGTCTGTACTG GGGAAAGCGCATGGCCTCCCCTGAGGCATTGTTAGCGCACCCAGCAGGGTTTCAAGATGCTATCAGTCCGCCGCTATGGG TGCGGTGCATGATTGCCTCCTCGGTAGGGCTGCTGGCCTTGCTCGGGTATGGGTTCTACGCTGAGGGGGTTGCATTCGGC GCTGGACTAACTCTCGCTGCTTTTGTGGCATTAGCGGTAGCCGGCAGCTTGTTGCTTCCCGCACCTGATAGCCCGAAGTT CTTGAGCTACATTCTTGCGGACCTAATCCGACGCTCGGCAGACTTTGAGAAAGCCGGGGATATAGGCAGAGCTGAAGCCG CCAAGGAGGCGCACCGAATGCTTTTTGAGGCTGCCAATTAA
Upstream 100 bases:
>100_bases TAGTCATGTTGATATAACCATCCTCGCGGAACACGATGGGCAGCCCGTTGTAGTCTTTGGTGATTACAATGCCAGCGTCA AAAAATCTGTTGAGGTCCTT
Downstream 100 bases:
>100_bases CTCATCACTTCTGAGGAGTTCTTCAACCAAGGCACCAGTGGAATCAAGGCGGACGAAGTTTGTTGGCTGGTGCGTCTTAG CCCCTCCAGATGCCTTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MVLFLAVCITAVSLRLFLQGSQACLYWGKRMASPEALLAHPAGFQDAISPPLWVRCMIASSVGLLALLGYGFYAEGVAFG AGLTLAAFVALAVAGSLLLPAPDSPKFLSYILADLIRRSADFEKAGDIGRAEAAKEAHRMLFEAAN
Sequences:
>Translated_146_residues MVLFLAVCITAVSLRLFLQGSQACLYWGKRMASPEALLAHPAGFQDAISPPLWVRCMIASSVGLLALLGYGFYAEGVAFG AGLTLAAFVALAVAGSLLLPAPDSPKFLSYILADLIRRSADFEKAGDIGRAEAAKEAHRMLFEAAN >Mature_146_residues MVLFLAVCITAVSLRLFLQGSQACLYWGKRMASPEALLAHPAGFQDAISPPLWVRCMIASSVGLLALLGYGFYAEGVAFG AGLTLAAFVALAVAGSLLLPAPDSPKFLSYILADLIRRSADFEKAGDIGRAEAAKEAHRMLFEAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15433; Mature: 15433
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLFLAVCITAVSLRLFLQGSQACLYWGKRMASPEALLAHPAGFQDAISPPLWVRCMIAS CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCHHHCCCHHHHHHHHHH SVGLLALLGYGFYAEGVAFGAGLTLAAFVALAVAGSLLLPAPDSPKFLSYILADLIRRSA HHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC DFEKAGDIGRAEAAKEAHRMLFEAAN CHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVLFLAVCITAVSLRLFLQGSQACLYWGKRMASPEALLAHPAGFQDAISPPLWVRCMIAS CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCCCCCHHHCCCHHHHHHHHHH SVGLLALLGYGFYAEGVAFGAGLTLAAFVALAVAGSLLLPAPDSPKFLSYILADLIRRSA HHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC DFEKAGDIGRAEAAKEAHRMLFEAAN CHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA