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The map label for this gene is trpH [H]

Identifier: 71908080

GI number: 71908080

Start: 2661690

End: 2662577

Strand: Reverse

Name: trpH [H]

Synonym: Daro_2462

Alternate gene names: 71908080

Gene position: 2662577-2661690 (Counterclockwise)

Preceding gene: 71908085

Following gene: 71908079

Centisome position: 59.15

GC content: 58.0

Gene sequence:

>888_bases
ATGGCCTCCTTCGTGCTAAACTCTTCGTTTGCCTTCAATCGCTTGCCTGTGACGCCTACCAATTTCGATTTTCACTGCCA
TTCCATCGTTTCCGACGGCCTGTTGCCGCCCGAAGTGGTGGCTAGACGCGCGGCAGAAAACGGCGTCGATCTTTGGGCGC
TGACCGATCACGACGATATCGGTGGTCTGGTCACAGCCCGGACGACTGCTGAGGAAGTCGGCATGAGCTTCGTCAATGGT
GTCGAAATTTCCATTGAGTGGCGCGGCACCCCGATTCATATTGTCGGACTCGGTTTCGATGCAGCCAATGCAGCACTGAC
CGGTGGCCTTGATGAGCTTCGTATTGGCCGTGTCGAGCGGGCCAAGCGCATGGGCGACGCCCTCGCAGCGATCGGTATTC
CCGGCGTCTATGAAGGTGCCCTGTGTTTTGTGACCAATCCCAGTCTGATCTCGCGAGCGCATTTTGGACGCTATATGGTC
TCTATCGGGATTGCCCGGGACATGGCCGGTATCTTTCAACACTATCTGACACCCGGCAAGCCGGGCTACGTCGACCATCG
CTGGGCGACGCTCGAAGAAGCGGTTGGCTGGATCGCCGGCGCCGGCGGCGTGGCCGTTGTCGCGCATCCCGGGCGCTACA
AGATGTCCGGTGGTGACATGCGCCGCTTCCTTGATGATTTCAAGGATGTTGGCGGTCAGGGTATCGAAGTGACCTGTGGC
AGCCATTCGCCGGATCACGTGATGCATTTCGCCCGTCTGGCTCGTCATTATGAGTTCCATGCTTCGCGCGGCTCCGATTT
TCATGGGCCCGAGGAAAGCTATGTGGATCTCGGTAAACTTCCTCAATTGCCTGAAGACCTGAAACCGGTCTGGCGTCTGG
TGTTCTGA

Upstream 100 bases:

>100_bases
CGGCGGCAGACGGATCTGCGCTCTCCCACGGAACGGGAGGCACTATAGCGGGATGCACGGGTCTAATCAACCTGCTGCAC
CGCACAAGGGGGGCCGGGCC

Downstream 100 bases:

>100_bases
CATGGCACGCGTTGTCAATATTCATCCCGAATCTCCGCAGCAGCGCCTGCTCGCCCAGGCAGCCGAATTTATTCGCAATG
GCGCCATCGTCGCCTTGCCC

Product: PHP, C-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MASFVLNSSFAFNRLPVTPTNFDFHCHSIVSDGLLPPEVVARRAAENGVDLWALTDHDDIGGLVTARTTAEEVGMSFVNG
VEISIEWRGTPIHIVGLGFDAANAALTGGLDELRIGRVERAKRMGDALAAIGIPGVYEGALCFVTNPSLISRAHFGRYMV
SIGIARDMAGIFQHYLTPGKPGYVDHRWATLEEAVGWIAGAGGVAVVAHPGRYKMSGGDMRRFLDDFKDVGGQGIEVTCG
SHSPDHVMHFARLARHYEFHASRGSDFHGPEESYVDLGKLPQLPEDLKPVWRLVF

Sequences:

>Translated_295_residues
MASFVLNSSFAFNRLPVTPTNFDFHCHSIVSDGLLPPEVVARRAAENGVDLWALTDHDDIGGLVTARTTAEEVGMSFVNG
VEISIEWRGTPIHIVGLGFDAANAALTGGLDELRIGRVERAKRMGDALAAIGIPGVYEGALCFVTNPSLISRAHFGRYMV
SIGIARDMAGIFQHYLTPGKPGYVDHRWATLEEAVGWIAGAGGVAVVAHPGRYKMSGGDMRRFLDDFKDVGGQGIEVTCG
SHSPDHVMHFARLARHYEFHASRGSDFHGPEESYVDLGKLPQLPEDLKPVWRLVF
>Mature_294_residues
ASFVLNSSFAFNRLPVTPTNFDFHCHSIVSDGLLPPEVVARRAAENGVDLWALTDHDDIGGLVTARTTAEEVGMSFVNGV
EISIEWRGTPIHIVGLGFDAANAALTGGLDELRIGRVERAKRMGDALAAIGIPGVYEGALCFVTNPSLISRAHFGRYMVS
IGIARDMAGIFQHYLTPGKPGYVDHRWATLEEAVGWIAGAGGVAVVAHPGRYKMSGGDMRRFLDDFKDVGGQGIEVTCGS
HSPDHVMHFARLARHYEFHASRGSDFHGPEESYVDLGKLPQLPEDLKPVWRLVF

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=274, Percent_Identity=37.956204379562, Blast_Score=188, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 32053; Mature: 31922

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFVLNSSFAFNRLPVTPTNFDFHCHSIVSDGLLPPEVVARRAAENGVDLWALTDHDDI
CCCEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCC
GGLVTARTTAEEVGMSFVNGVEISIEWRGTPIHIVGLGFDAANAALTGGLDELRIGRVER
CCEEEECCCHHHHHHHHHCCEEEEEEECCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHH
AKRMGDALAAIGIPGVYEGALCFVTNPSLISRAHFGRYMVSIGIARDMAGIFQHYLTPGK
HHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PGYVDHRWATLEEAVGWIAGAGGVAVVAHPGRYKMSGGDMRRFLDDFKDVGGQGIEVTCG
CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEECCCHHHHHHHHHHHHCCCCCEEEEEC
SHSPDHVMHFARLARHYEFHASRGSDFHGPEESYVDLGKLPQLPEDLKPVWRLVF
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
ASFVLNSSFAFNRLPVTPTNFDFHCHSIVSDGLLPPEVVARRAAENGVDLWALTDHDDI
CCEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCCCCC
GGLVTARTTAEEVGMSFVNGVEISIEWRGTPIHIVGLGFDAANAALTGGLDELRIGRVER
CCEEEECCCHHHHHHHHHCCEEEEEEECCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHH
AKRMGDALAAIGIPGVYEGALCFVTNPSLISRAHFGRYMVSIGIARDMAGIFQHYLTPGK
HHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PGYVDHRWATLEEAVGWIAGAGGVAVVAHPGRYKMSGGDMRRFLDDFKDVGGQGIEVTCG
CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEECCCHHHHHHHHHHHHCCCCCEEEEEC
SHSPDHVMHFARLARHYEFHASRGSDFHGPEESYVDLGKLPQLPEDLKPVWRLVF
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]