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The map label for this gene is scpB [H]

Identifier: 71908074

GI number: 71908074

Start: 2657543

End: 2658079

Strand: Reverse

Name: scpB [H]

Synonym: Daro_2456

Alternate gene names: 71908074

Gene position: 2658079-2657543 (Counterclockwise)

Preceding gene: 71908075

Following gene: 71908073

Centisome position: 59.05

GC content: 59.78

Gene sequence:

>537_bases
GTGGAACCGAGCCTGATCAAGAGAGTGCTTGAGGCGGCGCTGCTCGCCGCGCGTGAGCCGATGACGCCCAGCGACATGAA
AAAGATGTTCGACGAGGAATTTTCGTCCGAAACCCTGCGCAAGCTGCTCGACCAGCTCCGCGAGGAGTGGGCCGAGCGGC
CGGTCGAACTGATCCAGCTCGCGTCCGGCTGGCGCTTCCGGACGCGGGCCGAATACCTGCCGTACATCGAGCGTTTGAAC
CCCGAGCGGCCGCCAAAATATTCGCGCGCCGTCCTTGAAACCTTGGCCATCATCGCCTATCGTCAGCCGGTAACGCGGGG
TGATATCGAAGAGATTCGTGGTGTCGCGGTCAATACCAACGTCGTCAAAACCCTTGAAGAGCGCGGCTGGATCGATGTTG
TCGGCCATCGTGATACACCGGGGCGGCCAGCGCTATTTGCCACGACCAAGCAATTTCTCGATGATCTCGGTCTCAGAAGC
GTCAGCGAACTGCCGCCGTTAGAACAAATCAGCCAGACACTGGAGCTGGAACAATGA

Upstream 100 bases:

>100_bases
GTTGTTCATTTCATTGCCATGCTTGAACTCGGCCGGGAAAAACTGATTGAAATTACCCAGAGCGAAGCTTTTCAACCCAT
TTACGTTCGAGTGCATCAAG

Downstream 100 bases:

>100_bases
AAAATAAACGCACACCATTCCGTCAATCGTCGAACAAATCCGAGGGGGCTGCCGAGCGCCGACCGGAAGATGCAGGTCCA
CGTGTCGGCGCACCGTCGCG

Product: condensin subunit ScpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MEPSLIKRVLEAALLAAREPMTPSDMKKMFDEEFSSETLRKLLDQLREEWAERPVELIQLASGWRFRTRAEYLPYIERLN
PERPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVAVNTNVVKTLEERGWIDVVGHRDTPGRPALFATTKQFLDDLGLRS
VSELPPLEQISQTLELEQ

Sequences:

>Translated_178_residues
MEPSLIKRVLEAALLAAREPMTPSDMKKMFDEEFSSETLRKLLDQLREEWAERPVELIQLASGWRFRTRAEYLPYIERLN
PERPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVAVNTNVVKTLEERGWIDVVGHRDTPGRPALFATTKQFLDDLGLRS
VSELPPLEQISQTLELEQ
>Mature_178_residues
MEPSLIKRVLEAALLAAREPMTPSDMKKMFDEEFSSETLRKLLDQLREEWAERPVELIQLASGWRFRTRAEYLPYIERLN
PERPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVAVNTNVVKTLEERGWIDVVGHRDTPGRPALFATTKQFLDDLGLRS
VSELPPLEQISQTLELEQ

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 20530; Mature: 20530

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPSLIKRVLEAALLAAREPMTPSDMKKMFDEEFSSETLRKLLDQLREEWAERPVELIQL
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASGWRFRTRAEYLPYIERLNPERPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVAVNTN
HCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
VVKTLEERGWIDVVGHRDTPGRPALFATTKQFLDDLGLRSVSELPPLEQISQTLELEQ
HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHCCCC
>Mature Secondary Structure
MEPSLIKRVLEAALLAAREPMTPSDMKKMFDEEFSSETLRKLLDQLREEWAERPVELIQL
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASGWRFRTRAEYLPYIERLNPERPPKYSRAVLETLAIIAYRQPVTRGDIEEIRGVAVNTN
HCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHH
VVKTLEERGWIDVVGHRDTPGRPALFATTKQFLDDLGLRSVSELPPLEQISQTLELEQ
HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]