| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907928
Identifier: 71907928
GI number: 71907928
Start: 2490479
End: 2492479
Strand: Reverse
Name: 71907928
Synonym: Daro_2309
Alternate gene names: NA
Gene position: 2492479-2490479 (Counterclockwise)
Preceding gene: 71907951
Following gene: 71907922
Centisome position: 55.37
GC content: 57.47
Gene sequence:
>2001_bases ATGCTCACAAATATCCGCGGTCTGGTCGATCGGCTCGAACTTGCCCCTACTCGCGGCGTTATGCCATTGTTCGAGGCGAT ATCAAACGCGATGGACGCCATAGAGGAAAAATACCGGAACCCGGCGGGCGGCGCCGTTCGGATAAGGCTTTTGGCGTCGG ACGATTTGGTTCGGCAGGCGGGCGATGAAACCCAGGTATTTGACGGATTTGAAATCACCGATGATGGAGCAGGATTCACG GACGCCAACATCGCTTCATTCGGCGAAGCCTACACGCTGTCCAAGGTGAAGCTCGGCGGGAAGGGCGTGGGCCGATTTAC TTTCCTCAAGGTTTTTTCGAAGTGCGAAGTGCGCAGCGTGTTCGAGAAGGACGGCAAACGCCTGTCCCGCAATTTCGGAT TTTCTATCGTTAGCGAACTGGAAGGAGCAGACAAGACTGAGCCGACCGATGCGCCCACGGGGACGACCATCACCGTTCGC GGTCTGTCTGATCGGTATCGCGGCGCATGGCCGACGGACCCGGTAGTGCTGGCGGAGCGCATCATCGCCCATTTCCTCAT TCGGTTCGCCGCCCGGTCCTGCCCACCGATGTCGCTCGAGTCCCCCGGCAACGCCCCGATCGATCTCCAAGCGCTATTCC AATCCACGGTCCAAGCTCACATTGAGGAGAAGTTCTTCGATGTCCTCGGCCACACATTCGCCCTCCAGGCGTTCCGCCAT CGGGACGGCAGGGCACGCCACGATTATCACCTTTGCGCCAACGGCCGCGAGGTGACGACCGCCAAGCTCAGGGATTTGCT CCCGGAGTTGCCAGAGCGCCTCGTGGACGAGGAGCAAGAGGCATACACCCTCATCGTTTTGGTGACGGGAGAGTATTTGG ACGATAACGCTAACCAGGAACGTACGAAGATCGCATTCCAGTCTGAGGATGAGCCCGAGTTAGAGCAGACGCTGGTGTCC CGCCAAGCTCTCAACAAAGGGCTCGCAGAAGCGCTCCGTTCTGTCCTTGCCATCGACTTAAAAACCACCAACGACGAAAA AATCGCGCAGATCGCGCGGTTTGTCGAACATGCGCCCGAATACCGCGTGCTGACGCATGAAAAATACAGACAGCTCATCG AGCAGCGGGTCCAGCCCGGCCTTAAGGAAGAGCAGCTTGACGAGGCTCTGCTCCACATCCGCCGCGACATTGAGGACGGG ATGCGGAAGGAGGAGCGGCATGTCGCGGCGCTTATCGAGAAGGAATCGTTCGACCAGTACCAGGAGCGGATAAAGACCCT TATGGAGGAGATGAACGATGTCGGCAAAGCCAAACTGGCCGACTATGTCGCCCATCGGCGCACCATCCTGGATCTGGTCG ATCAAAGCCTTAAGCGCGTGCAGTCCGACGACAAATACCCGTTCGAGAAGGTGCTGCACAAGATGATTTTCCCGATGGGC GTGACATCCAAGGATGTGTTCCTCGATCAGCAGAATCTCTGGCTGCTAGACGAGCGACTTTGCTTTCACACGCTGCTCAC ATCGGACAAGAAACTGAACAAGGTCGCCGGGCTGGAGAATACATCCGGCAAGGAACCCGATATCCTGGCGTTTTTTTACG ACACGCCGATTGGCGTAGCCGAGCCGGACAACCTTCCAGGAGGAGGGCTGGTCGTCGTCGAGTTCAAGCGGCCTGGCCGG GACGACTACGATAAGGATCCGGCTGACCAGATCATCCAGCGCTTCGTGGAAGTCAATCAGGGCGCGGTAAAGGACGTCGA CGGCAGGCCCGTCAATCCCGATCGGCTCCGGTATACAGGGTATCTGATCGCTGACCTTACCCCGACCCTCCGAAAGCAGG TGTCGCTGCGATATCACAAGACTGCCGACAACGAGGGGTACTTCTTTACCCTGCCCGAAGGCAATGGGTACGTTGAAATC ATCTCTTATGACAAGTTGGTGCGGGACGCGAAGCGTCGTAACCGTATGCTCTTCGAGAAATTGGGACTCCACAAGCATTA A
Upstream 100 bases:
>100_bases CGTCGAGGTCTGCCCTGTCTCGGTCGACCGGGATTCAGGATGCGTGCATAATCCAAAATTTGCCCTTTGTCACAGGGCAG GGGATACAGGAAGCTCCGCC
Downstream 100 bases:
>100_bases GCCAGTGGGAAGAGTGCCGGACCGAACTGCCATCTCAGTACAAATCTTACGACGGTCTCGTTTCTTACTCCTGTGAAGCT GATACTCAGCAACGCAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: GTPase/ATPase
Number of amino acids: Translated: 666; Mature: 666
Protein sequence:
>666_residues MLTNIRGLVDRLELAPTRGVMPLFEAISNAMDAIEEKYRNPAGGAVRIRLLASDDLVRQAGDETQVFDGFEITDDGAGFT DANIASFGEAYTLSKVKLGGKGVGRFTFLKVFSKCEVRSVFEKDGKRLSRNFGFSIVSELEGADKTEPTDAPTGTTITVR GLSDRYRGAWPTDPVVLAERIIAHFLIRFAARSCPPMSLESPGNAPIDLQALFQSTVQAHIEEKFFDVLGHTFALQAFRH RDGRARHDYHLCANGREVTTAKLRDLLPELPERLVDEEQEAYTLIVLVTGEYLDDNANQERTKIAFQSEDEPELEQTLVS RQALNKGLAEALRSVLAIDLKTTNDEKIAQIARFVEHAPEYRVLTHEKYRQLIEQRVQPGLKEEQLDEALLHIRRDIEDG MRKEERHVAALIEKESFDQYQERIKTLMEEMNDVGKAKLADYVAHRRTILDLVDQSLKRVQSDDKYPFEKVLHKMIFPMG VTSKDVFLDQQNLWLLDERLCFHTLLTSDKKLNKVAGLENTSGKEPDILAFFYDTPIGVAEPDNLPGGGLVVVEFKRPGR DDYDKDPADQIIQRFVEVNQGAVKDVDGRPVNPDRLRYTGYLIADLTPTLRKQVSLRYHKTADNEGYFFTLPEGNGYVEI ISYDKLVRDAKRRNRMLFEKLGLHKH
Sequences:
>Translated_666_residues MLTNIRGLVDRLELAPTRGVMPLFEAISNAMDAIEEKYRNPAGGAVRIRLLASDDLVRQAGDETQVFDGFEITDDGAGFT DANIASFGEAYTLSKVKLGGKGVGRFTFLKVFSKCEVRSVFEKDGKRLSRNFGFSIVSELEGADKTEPTDAPTGTTITVR GLSDRYRGAWPTDPVVLAERIIAHFLIRFAARSCPPMSLESPGNAPIDLQALFQSTVQAHIEEKFFDVLGHTFALQAFRH RDGRARHDYHLCANGREVTTAKLRDLLPELPERLVDEEQEAYTLIVLVTGEYLDDNANQERTKIAFQSEDEPELEQTLVS RQALNKGLAEALRSVLAIDLKTTNDEKIAQIARFVEHAPEYRVLTHEKYRQLIEQRVQPGLKEEQLDEALLHIRRDIEDG MRKEERHVAALIEKESFDQYQERIKTLMEEMNDVGKAKLADYVAHRRTILDLVDQSLKRVQSDDKYPFEKVLHKMIFPMG VTSKDVFLDQQNLWLLDERLCFHTLLTSDKKLNKVAGLENTSGKEPDILAFFYDTPIGVAEPDNLPGGGLVVVEFKRPGR DDYDKDPADQIIQRFVEVNQGAVKDVDGRPVNPDRLRYTGYLIADLTPTLRKQVSLRYHKTADNEGYFFTLPEGNGYVEI ISYDKLVRDAKRRNRMLFEKLGLHKH >Mature_666_residues MLTNIRGLVDRLELAPTRGVMPLFEAISNAMDAIEEKYRNPAGGAVRIRLLASDDLVRQAGDETQVFDGFEITDDGAGFT DANIASFGEAYTLSKVKLGGKGVGRFTFLKVFSKCEVRSVFEKDGKRLSRNFGFSIVSELEGADKTEPTDAPTGTTITVR GLSDRYRGAWPTDPVVLAERIIAHFLIRFAARSCPPMSLESPGNAPIDLQALFQSTVQAHIEEKFFDVLGHTFALQAFRH RDGRARHDYHLCANGREVTTAKLRDLLPELPERLVDEEQEAYTLIVLVTGEYLDDNANQERTKIAFQSEDEPELEQTLVS RQALNKGLAEALRSVLAIDLKTTNDEKIAQIARFVEHAPEYRVLTHEKYRQLIEQRVQPGLKEEQLDEALLHIRRDIEDG MRKEERHVAALIEKESFDQYQERIKTLMEEMNDVGKAKLADYVAHRRTILDLVDQSLKRVQSDDKYPFEKVLHKMIFPMG VTSKDVFLDQQNLWLLDERLCFHTLLTSDKKLNKVAGLENTSGKEPDILAFFYDTPIGVAEPDNLPGGGLVVVEFKRPGR DDYDKDPADQIIQRFVEVNQGAVKDVDGRPVNPDRLRYTGYLIADLTPTLRKQVSLRYHKTADNEGYFFTLPEGNGYVEI ISYDKLVRDAKRRNRMLFEKLGLHKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75586; Mature: 75586
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTNIRGLVDRLELAPTRGVMPLFEAISNAMDAIEEKYRNPAGGAVRIRLLASDDLVRQA CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHC GDETQVFDGFEITDDGAGFTDANIASFGEAYTLSKVKLGGKGVGRFTFLKVFSKCEVRSV CCCCEEECCEEECCCCCCCCCCCHHHCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHH FEKDGKRLSRNFGFSIVSELEGADKTEPTDAPTGTTITVRGLSDRYRGAWPTDPVVLAER HHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH IIAHFLIRFAARSCPPMSLESPGNAPIDLQALFQSTVQAHIEEKFFDVLGHTFALQAFRH HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDGRARHDYHLCANGREVTTAKLRDLLPELPERLVDEEQEAYTLIVLVTGEYLDDNANQE CCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCC RTKIAFQSEDEPELEQTLVSRQALNKGLAEALRSVLAIDLKTTNDEKIAQIARFVEHAPE HHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCC YRVLTHEKYRQLIEQRVQPGLKEEQLDEALLHIRRDIEDGMRKEERHVAALIEKESFDQY CEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QERIKTLMEEMNDVGKAKLADYVAHRRTILDLVDQSLKRVQSDDKYPFEKVLHKMIFPMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC VTSKDVFLDQQNLWLLDERLCFHTLLTSDKKLNKVAGLENTSGKEPDILAFFYDTPIGVA CCCHHHEECCCCCEEHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC EPDNLPGGGLVVVEFKRPGRDDYDKDPADQIIQRFVEVNQGAVKDVDGRPVNPDRLRYTG CCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE YLIADLTPTLRKQVSLRYHKTADNEGYFFTLPEGNGYVEIISYDKLVRDAKRRNRMLFEK EEEECCCHHHHHHHHHHEEECCCCCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHH LGLHKH HCCCCC >Mature Secondary Structure MLTNIRGLVDRLELAPTRGVMPLFEAISNAMDAIEEKYRNPAGGAVRIRLLASDDLVRQA CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHC GDETQVFDGFEITDDGAGFTDANIASFGEAYTLSKVKLGGKGVGRFTFLKVFSKCEVRSV CCCCEEECCEEECCCCCCCCCCCHHHCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHH FEKDGKRLSRNFGFSIVSELEGADKTEPTDAPTGTTITVRGLSDRYRGAWPTDPVVLAER HHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHH IIAHFLIRFAARSCPPMSLESPGNAPIDLQALFQSTVQAHIEEKFFDVLGHTFALQAFRH HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDGRARHDYHLCANGREVTTAKLRDLLPELPERLVDEEQEAYTLIVLVTGEYLDDNANQE CCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCC RTKIAFQSEDEPELEQTLVSRQALNKGLAEALRSVLAIDLKTTNDEKIAQIARFVEHAPE HHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHCCC YRVLTHEKYRQLIEQRVQPGLKEEQLDEALLHIRRDIEDGMRKEERHVAALIEKESFDQY CEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QERIKTLMEEMNDVGKAKLADYVAHRRTILDLVDQSLKRVQSDDKYPFEKVLHKMIFPMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC VTSKDVFLDQQNLWLLDERLCFHTLLTSDKKLNKVAGLENTSGKEPDILAFFYDTPIGVA CCCHHHEECCCCCEEHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCC EPDNLPGGGLVVVEFKRPGRDDYDKDPADQIIQRFVEVNQGAVKDVDGRPVNPDRLRYTG CCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE YLIADLTPTLRKQVSLRYHKTADNEGYFFTLPEGNGYVEIISYDKLVRDAKRRNRMLFEK EEEECCCHHHHHHHHHHEEECCCCCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHH LGLHKH HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA