| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907811
Identifier: 71907811
GI number: 71907811
Start: 2366412
End: 2367833
Strand: Reverse
Name: 71907811
Synonym: Daro_2189
Alternate gene names: NA
Gene position: 2367833-2366412 (Counterclockwise)
Preceding gene: 71907812
Following gene: 71907810
Centisome position: 52.61
GC content: 58.09
Gene sequence:
>1422_bases ATGTGGCCTAGCGTATTCAAAGTAGTCGGCGGCAGCTTGCTGACATTTGCCCTCGTCTGGGCGCTTGTGCTCGGGTGGTG GCAGTCGAATGATTACGAGCCAAGCAAACTTGATCTTGCGCTCTATCTTGGGGCCTTGCCGCTGGCCTTCGTAGGTGGCT ATTTGCTGTTACGCAGTTTTATCGAACATCTCAAGGCGCCGCCAGTCGTCGACAAGCCGGCAGCACCGGCCTTGCGTGAC GATGACCCCCTGGCTGCCACATCGGCCAAGACTGCGGCCGTTGAGCGCGCATTCAATATTTGTCTGCTTGAAGGCTTTGT CACGACAGCGGTTGGCGCATCGACGGATGACGTACTTTCTGCAATTGATGGCGGTCAGCGGCCGGTGCCGAGTTTTCGCT TGACTGACGAGGCTGGCTTCCCTGTCTTCCTTGCCGAGGTCAAAGACCTCGACGTCGACGGCTTGCAGGAAAAAATTGCA GCCGATGCCGCACCAATTCGCGAATTTGCTGGGAGGGAAGGGGTTGCTCGTACTCTGGCGTTGCTCGATCAGTTGCTGGG CACGGTCAAGGAGCGCCTGACGCCTTTGTTGGCGCAAGAAGGTGAAGCCTTGAAGCTGCGCGTCATCTGGTTGATTCCGG CCAACTGGGATTCTTCGCAGCTAGCCGGATTGCGGGCCTGGTTGCAGTTGAACTACTGGCCGGATCAGGCGCGTTCCAGG CTGGAAATATCCCTGGTGCCTGTGGGCACTGAAGTTGACGCGATGCATCAGCTGGATGAAATCAACCTGCGAACCAATCG TGATCCGTCAAATAGCGAAGTCACCTTGTTGCTCGGGGCTGTGTCGGCCGTAGATGAGCAGACGGTGGAAAGCTGGGCTG CTGGCAACAGGCTATTTTCCGCTGATCATCAGGATCGAAGGATACCGGGAGAGGGGGCCGTCGCTTTGCTCCTTGCCAGT CGGGCAACGGTAGAGCGTCTTGATCTACCGGAGGTGGTGGTGCTCAGTCGGGTCAGCATGGGCGCTCGCGACAAGCCGGT TGATTCCGGCGGGCGAATTGGCGGCAAGCTGATCGAACAACTCGTTACCGGGCTGCTTGATGTCAGCGTTGTCGAGAGTA CGCAGGTCAAGACTGCCTTGCTGGATGCCGATCATCGCGCTACCAGGGTTGCCGAAGCCATGGAAGGGCTCGGGCAGACC TTCGCGCATCTTGATCCGATCAAGGATTGTCTCGCTGTTGGTACCGTCAGTGGTGATCTGTCGCCAATTGGTAGCCTGAT TGCGCTTGCCTGCGCCAGAACGAAGGTTCAGGCGACCGAGGCACCGGTGCTGTGCCTGAGCAACCAACATGAACGCGATA GGGCAGTGCTGCTGGCCATGCCTTTTACCGCGCAACCGAATACCGAATCCAGCCCTACTTGA
Upstream 100 bases:
>100_bases GGACGCCCGGCGGCTCGTCATGGGGACAAAACTGCTTGTGGTGCGATATTGATCGCCAGCCAATCGTTGACAACTGATTA AAAAGCGGCGTTCGATATCC
Downstream 100 bases:
>100_bases GTCAATGAGCAAAGCCAATTCATGATGTCCCAAATCCGTTCGTTTCTGACTGACTCCCGATTTCTTTCATTTGTCGGGGT GGCCGCCGTGGCGGCATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MWPSVFKVVGGSLLTFALVWALVLGWWQSNDYEPSKLDLALYLGALPLAFVGGYLLLRSFIEHLKAPPVVDKPAAPALRD DDPLAATSAKTAAVERAFNICLLEGFVTTAVGASTDDVLSAIDGGQRPVPSFRLTDEAGFPVFLAEVKDLDVDGLQEKIA ADAAPIREFAGREGVARTLALLDQLLGTVKERLTPLLAQEGEALKLRVIWLIPANWDSSQLAGLRAWLQLNYWPDQARSR LEISLVPVGTEVDAMHQLDEINLRTNRDPSNSEVTLLLGAVSAVDEQTVESWAAGNRLFSADHQDRRIPGEGAVALLLAS RATVERLDLPEVVVLSRVSMGARDKPVDSGGRIGGKLIEQLVTGLLDVSVVESTQVKTALLDADHRATRVAEAMEGLGQT FAHLDPIKDCLAVGTVSGDLSPIGSLIALACARTKVQATEAPVLCLSNQHERDRAVLLAMPFTAQPNTESSPT
Sequences:
>Translated_473_residues MWPSVFKVVGGSLLTFALVWALVLGWWQSNDYEPSKLDLALYLGALPLAFVGGYLLLRSFIEHLKAPPVVDKPAAPALRD DDPLAATSAKTAAVERAFNICLLEGFVTTAVGASTDDVLSAIDGGQRPVPSFRLTDEAGFPVFLAEVKDLDVDGLQEKIA ADAAPIREFAGREGVARTLALLDQLLGTVKERLTPLLAQEGEALKLRVIWLIPANWDSSQLAGLRAWLQLNYWPDQARSR LEISLVPVGTEVDAMHQLDEINLRTNRDPSNSEVTLLLGAVSAVDEQTVESWAAGNRLFSADHQDRRIPGEGAVALLLAS RATVERLDLPEVVVLSRVSMGARDKPVDSGGRIGGKLIEQLVTGLLDVSVVESTQVKTALLDADHRATRVAEAMEGLGQT FAHLDPIKDCLAVGTVSGDLSPIGSLIALACARTKVQATEAPVLCLSNQHERDRAVLLAMPFTAQPNTESSPT >Mature_473_residues MWPSVFKVVGGSLLTFALVWALVLGWWQSNDYEPSKLDLALYLGALPLAFVGGYLLLRSFIEHLKAPPVVDKPAAPALRD DDPLAATSAKTAAVERAFNICLLEGFVTTAVGASTDDVLSAIDGGQRPVPSFRLTDEAGFPVFLAEVKDLDVDGLQEKIA ADAAPIREFAGREGVARTLALLDQLLGTVKERLTPLLAQEGEALKLRVIWLIPANWDSSQLAGLRAWLQLNYWPDQARSR LEISLVPVGTEVDAMHQLDEINLRTNRDPSNSEVTLLLGAVSAVDEQTVESWAAGNRLFSADHQDRRIPGEGAVALLLAS RATVERLDLPEVVVLSRVSMGARDKPVDSGGRIGGKLIEQLVTGLLDVSVVESTQVKTALLDADHRATRVAEAMEGLGQT FAHLDPIKDCLAVGTVSGDLSPIGSLIALACARTKVQATEAPVLCLSNQHERDRAVLLAMPFTAQPNTESSPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50762; Mature: 50762
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWPSVFKVVGGSLLTFALVWALVLGWWQSNDYEPSKLDLALYLGALPLAFVGGYLLLRSF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IEHLKAPPVVDKPAAPALRDDDPLAATSAKTAAVERAFNICLLEGFVTTAVGASTDDVLS HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AIDGGQRPVPSFRLTDEAGFPVFLAEVKDLDVDGLQEKIAADAAPIREFAGREGVARTLA HHCCCCCCCCCEEEECCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LLDQLLGTVKERLTPLLAQEGEALKLRVIWLIPANWDSSQLAGLRAWLQLNYWPDQARSR HHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHEECCCCHHHCCE LEISLVPVGTEVDAMHQLDEINLRTNRDPSNSEVTLLLGAVSAVDEQTVESWAAGNRLFS EEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEC ADHQDRRIPGEGAVALLLASRATVERLDLPEVVVLSRVSMGARDKPVDSGGRIGGKLIEQ CCCCCCCCCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH LVTGLLDVSVVESTQVKTALLDADHRATRVAEAMEGLGQTFAHLDPIKDCLAVGTVSGDL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH SPIGSLIALACARTKVQATEAPVLCLSNQHERDRAVLLAMPFTAQPNTESSPT HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MWPSVFKVVGGSLLTFALVWALVLGWWQSNDYEPSKLDLALYLGALPLAFVGGYLLLRSF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IEHLKAPPVVDKPAAPALRDDDPLAATSAKTAAVERAFNICLLEGFVTTAVGASTDDVLS HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AIDGGQRPVPSFRLTDEAGFPVFLAEVKDLDVDGLQEKIAADAAPIREFAGREGVARTLA HHCCCCCCCCCEEEECCCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LLDQLLGTVKERLTPLLAQEGEALKLRVIWLIPANWDSSQLAGLRAWLQLNYWPDQARSR HHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHEECCCCHHHCCE LEISLVPVGTEVDAMHQLDEINLRTNRDPSNSEVTLLLGAVSAVDEQTVESWAAGNRLFS EEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEC ADHQDRRIPGEGAVALLLASRATVERLDLPEVVVLSRVSMGARDKPVDSGGRIGGKLIEQ CCCCCCCCCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH LVTGLLDVSVVESTQVKTALLDADHRATRVAEAMEGLGQTFAHLDPIKDCLAVGTVSGDL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH SPIGSLIALACARTKVQATEAPVLCLSNQHERDRAVLLAMPFTAQPNTESSPT HHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA