| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907809
Identifier: 71907809
GI number: 71907809
Start: 2361598
End: 2362581
Strand: Reverse
Name: 71907809
Synonym: Daro_2187
Alternate gene names: NA
Gene position: 2362581-2361598 (Counterclockwise)
Preceding gene: 71907810
Following gene: 71907808
Centisome position: 52.49
GC content: 56.3
Gene sequence:
>984_bases ATGAGTACGGTGATCGCCTCTCAGGCCACCTGTTTCGGCAAAATTCCTTCGCGCGGCGATTTCGTCAAGGGAGCCGGGCA GCATCAGCTGATCAGCGTCCTTGACCGCTGGGTTTCGCAAACCATGGAGTTGCTGTCGGAAGATCCGCGCTGGAAGAGCG CCTACGACAGTGCCTGCGCGGTGGACTTCGCCTTTATCGGGGCTAGAAGCCGGCTGTCTGTCGTCGGTCACCTGCGGCCC AGTACCGACTCATCCGGCCGTCGTTTTCCGTTCATTGCAGCGGCAACGATCGAGCGTGATGATGCGCTGATGTTCCGCTG CGCTCCTGTAGGACTTGCCTATTCCTTTGGCGCTTTGGCACGTATTTCCGAAGCCGGGGTCAATGGCGCGGAGGTCGGAG GTCTGCTGGCCGAACTTGACTCGATCAATTGTGCTGCTGACTTTGAAACGGCCGTCCAGACTGATCCGCTGGGCAATTTT GTCCGGCGTAATACGCTCGATTCGTTGGCGAGCCTGGTCGGTTCTCCGAATGCCGAATCGGTGCGCCGGATCATTCTCGC GATTGGCTTACTGATGCGTCCGATTCTCGGTCAAGGGACGGTCTCTGTCGAAAAAGACATCGTCTTGCCGCTGCCCAACG AAGAGCGCAATCGCAATCTAGTGGCCGGTCTGTGGTTATATCTGGTGACAGCATTCCTGCGCAAAACCTCGGTTGAGCTT CAGGTAATCATCGAACGGCGCGCCGGCGACCCTCATCTGGTACTCGGCTTCAATGGATCTTCGGCTTCAACCCTGTTGGC AGCACTTTCGCCTGAAACGGCAGCCGAGAGGATTATTTCCCTTGTCGACCCCGAGTGGATTGACGACCAGCCGGATATTG TCAATGACTATGGGGTTGCCAAGCTTTCCTCATATCTCGCTCAGCCGAATATTTCCCTTGAGCATGCCATCAATACGTTC AGAGAAGTTTTTCTAGGCGAATGA
Upstream 100 bases:
>100_bases TACTGCCCCGATCGGTGGCTGTCGGCAAAGCTGGCAAATATCAGGAACCAGCGCAGGAGACAGCCGCGCCGGCCCCAGTC AATACGGGAGGAGGTGTCCA
Downstream 100 bases:
>100_bases ATATGAAAACCCCACTAATCGTTGCTGCATTGTGTCTCGCCTTCCAAGGGGCAGCTTTTGCCCAGTCAAAATCCCCCGAA GAGCCAGGTAAGGTGATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSTVIASQATCFGKIPSRGDFVKGAGQHQLISVLDRWVSQTMELLSEDPRWKSAYDSACAVDFAFIGARSRLSVVGHLRP STDSSGRRFPFIAAATIERDDALMFRCAPVGLAYSFGALARISEAGVNGAEVGGLLAELDSINCAADFETAVQTDPLGNF VRRNTLDSLASLVGSPNAESVRRIILAIGLLMRPILGQGTVSVEKDIVLPLPNEERNRNLVAGLWLYLVTAFLRKTSVEL QVIIERRAGDPHLVLGFNGSSASTLLAALSPETAAERIISLVDPEWIDDQPDIVNDYGVAKLSSYLAQPNISLEHAINTF REVFLGE
Sequences:
>Translated_327_residues MSTVIASQATCFGKIPSRGDFVKGAGQHQLISVLDRWVSQTMELLSEDPRWKSAYDSACAVDFAFIGARSRLSVVGHLRP STDSSGRRFPFIAAATIERDDALMFRCAPVGLAYSFGALARISEAGVNGAEVGGLLAELDSINCAADFETAVQTDPLGNF VRRNTLDSLASLVGSPNAESVRRIILAIGLLMRPILGQGTVSVEKDIVLPLPNEERNRNLVAGLWLYLVTAFLRKTSVEL QVIIERRAGDPHLVLGFNGSSASTLLAALSPETAAERIISLVDPEWIDDQPDIVNDYGVAKLSSYLAQPNISLEHAINTF REVFLGE >Mature_326_residues STVIASQATCFGKIPSRGDFVKGAGQHQLISVLDRWVSQTMELLSEDPRWKSAYDSACAVDFAFIGARSRLSVVGHLRPS TDSSGRRFPFIAAATIERDDALMFRCAPVGLAYSFGALARISEAGVNGAEVGGLLAELDSINCAADFETAVQTDPLGNFV RRNTLDSLASLVGSPNAESVRRIILAIGLLMRPILGQGTVSVEKDIVLPLPNEERNRNLVAGLWLYLVTAFLRKTSVELQ VIIERRAGDPHLVLGFNGSSASTLLAALSPETAAERIISLVDPEWIDDQPDIVNDYGVAKLSSYLAQPNISLEHAINTFR EVFLGE
Specific function: Unknown
COG id: COG3913
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35316; Mature: 35184
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVIASQATCFGKIPSRGDFVKGAGQHQLISVLDRWVSQTMELLSEDPRWKSAYDSACA CCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHH VDFAFIGARSRLSVVGHLRPSTDSSGRRFPFIAAATIERDDALMFRCAPVGLAYSFGALA HHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHH RISEAGVNGAEVGGLLAELDSINCAADFETAVQTDPLGNFVRRNTLDSLASLVGSPNAES HHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHH VRRIILAIGLLMRPILGQGTVSVEKDIVLPLPNEERNRNLVAGLWLYLVTAFLRKTSVEL HHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCE QVIIERRAGDPHLVLGFNGSSASTLLAALSPETAAERIISLVDPEWIDDQPDIVNDYGVA EEEEEECCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH KLSSYLAQPNISLEHAINTFREVFLGE HHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure STVIASQATCFGKIPSRGDFVKGAGQHQLISVLDRWVSQTMELLSEDPRWKSAYDSACA CCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHH VDFAFIGARSRLSVVGHLRPSTDSSGRRFPFIAAATIERDDALMFRCAPVGLAYSFGALA HHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHH RISEAGVNGAEVGGLLAELDSINCAADFETAVQTDPLGNFVRRNTLDSLASLVGSPNAES HHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHH VRRIILAIGLLMRPILGQGTVSVEKDIVLPLPNEERNRNLVAGLWLYLVTAFLRKTSVEL HHHHHHHHHHHHHHHHCCCCEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCE QVIIERRAGDPHLVLGFNGSSASTLLAALSPETAAERIISLVDPEWIDDQPDIVNDYGVA EEEEEECCCCCEEEEEECCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH KLSSYLAQPNISLEHAINTFREVFLGE HHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA