| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907787
Identifier: 71907787
GI number: 71907787
Start: 2336665
End: 2338053
Strand: Reverse
Name: 71907787
Synonym: Daro_2165
Alternate gene names: NA
Gene position: 2338053-2336665 (Counterclockwise)
Preceding gene: 71907788
Following gene: 71907786
Centisome position: 51.94
GC content: 54.5
Gene sequence:
>1389_bases ATGGCTGACGTGCTTACACCCAAGGTTCGTTCAGTCGAGAACATGGTTCAGCGGGCAAGGGGAGCGACCCGAAAATCATC TTCACCGGCTTGCCCGGTATGCCATCTCAAGGCTTGGATTTCGGTATTTTTTGATGGTACGGGTAACCACCGTGAACGGG ATTTTCCAAAATGCCATTCCAATGTGGCGGCCTTGTTCGATGCGCATCAGGACAATCCCGACGAGGGGATCATTCGTCTC TATTACGAAGGCTTGGGCCGTTCCTTCAGCTTTCGGGAACGCTACGAGGAAACCAAGGTTTATACCCGCGGTGGCGTACG TACATTAAAAACCGAGGGCTATCAAGAAGCCGACGACAGAAAATTGGGCAAGGGTTTTGCCGATGGCATTACCGAGCGCC TGGAAAAGGCATTGTTTGAACTCACTGACCAAATTGACCGCTTGAGGGGAAAACTCAACGTCGATGAAATCAACCTCGCC GTTTTCGGCTTCTCCCGTGGTTCGACGGAAGCGCGAGCTTTCCTGCATTGGCTGGCAGCCCATAGCAAGGTCAAGAAAGC CGGTACGAAACTGACTTACGACGATGTTCCCCTGAACGTGAAATTTCTCGGGATTTTCGATACCGTCGAGTCGGTTGGCT GGGCGGGCACCAACAAAATGCCCGAACTGATCAAGACCAAGGTGCCGGCTTTCGTGGAAAAGTGTACGCATATCGTCGCC GCCCACGAATTGCGCAGTGCGTTTCCGCTGACCCAGGTCGACCGCAATCATCGGTGCGTGGTTTATCCCGGTGCCCATGC CGACATCGGCGGCGGCTATGAGATGGATGAGCAAGGGCGCTCCAGTCAGCTTGCCCGCATTGCCCTCTTGCAGATGCTCG ACGAGGCGCGCGGGGCCGGGCTGAAGATGAGGTCGCTGGGGGAAATGAAGGCAAGCAAGCGTTGGGACGAAAGGTTTAAA CCTTCCTTCGACGTCCCCGCCACCGCTCAAAAATCCCTGAACGACTACCTTGCCGCTGTCAAACCGGCGGGTTCCATGAC GCATCATTTTCAGGCGCACATGGATCATTACTGGCGCTGGATCGATTCGGGTCTGGCGATGGAGGATGTCGAGCAGAAAC GCCAAGCATTCAAGGGCAACAAGGACAGGGAAGCGGATTTCCGCATCATGAAACACTTGCTGACCTTCACTGCGCGAACG CCGGAAGGGCGCGGCCAGGGCAAGATGCCAGTGAAGCGCGAGGGTATTCCAGCACCCGTCGAAAGTTTTTTTGAAACCTA CGTGCATGATTCGTTTGAGCACTTTTCGGCAACGGGTGGAACCTTACAGACTGATGCCAGTACAGCAGACTATTATCATT TACGAACAGTTCTTCAGCCAGTTGGTTGA
Upstream 100 bases:
>100_bases TGCTGGAAGCTCAGCAACGCGCTCTCGGGATGGAAGTGAAAACCTTATTCAAAATTTGGGATGGCGGACCAATTGAACGT ATTGATGGGAAGGGGAAATA
Downstream 100 bases:
>100_bases TTGATTCATCGCGCCAAACTGATTTACTTCCGACTCATTCCAGCGGACGGCCCAAAGTGCCACTTTGGGCCGTCCGCTAA ATTCACATCGACGAACTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MADVLTPKVRSVENMVQRARGATRKSSSPACPVCHLKAWISVFFDGTGNHRERDFPKCHSNVAALFDAHQDNPDEGIIRL YYEGLGRSFSFRERYEETKVYTRGGVRTLKTEGYQEADDRKLGKGFADGITERLEKALFELTDQIDRLRGKLNVDEINLA VFGFSRGSTEARAFLHWLAAHSKVKKAGTKLTYDDVPLNVKFLGIFDTVESVGWAGTNKMPELIKTKVPAFVEKCTHIVA AHELRSAFPLTQVDRNHRCVVYPGAHADIGGGYEMDEQGRSSQLARIALLQMLDEARGAGLKMRSLGEMKASKRWDERFK PSFDVPATAQKSLNDYLAAVKPAGSMTHHFQAHMDHYWRWIDSGLAMEDVEQKRQAFKGNKDREADFRIMKHLLTFTART PEGRGQGKMPVKREGIPAPVESFFETYVHDSFEHFSATGGTLQTDASTADYYHLRTVLQPVG
Sequences:
>Translated_462_residues MADVLTPKVRSVENMVQRARGATRKSSSPACPVCHLKAWISVFFDGTGNHRERDFPKCHSNVAALFDAHQDNPDEGIIRL YYEGLGRSFSFRERYEETKVYTRGGVRTLKTEGYQEADDRKLGKGFADGITERLEKALFELTDQIDRLRGKLNVDEINLA VFGFSRGSTEARAFLHWLAAHSKVKKAGTKLTYDDVPLNVKFLGIFDTVESVGWAGTNKMPELIKTKVPAFVEKCTHIVA AHELRSAFPLTQVDRNHRCVVYPGAHADIGGGYEMDEQGRSSQLARIALLQMLDEARGAGLKMRSLGEMKASKRWDERFK PSFDVPATAQKSLNDYLAAVKPAGSMTHHFQAHMDHYWRWIDSGLAMEDVEQKRQAFKGNKDREADFRIMKHLLTFTART PEGRGQGKMPVKREGIPAPVESFFETYVHDSFEHFSATGGTLQTDASTADYYHLRTVLQPVG >Mature_461_residues ADVLTPKVRSVENMVQRARGATRKSSSPACPVCHLKAWISVFFDGTGNHRERDFPKCHSNVAALFDAHQDNPDEGIIRLY YEGLGRSFSFRERYEETKVYTRGGVRTLKTEGYQEADDRKLGKGFADGITERLEKALFELTDQIDRLRGKLNVDEINLAV FGFSRGSTEARAFLHWLAAHSKVKKAGTKLTYDDVPLNVKFLGIFDTVESVGWAGTNKMPELIKTKVPAFVEKCTHIVAA HELRSAFPLTQVDRNHRCVVYPGAHADIGGGYEMDEQGRSSQLARIALLQMLDEARGAGLKMRSLGEMKASKRWDERFKP SFDVPATAQKSLNDYLAAVKPAGSMTHHFQAHMDHYWRWIDSGLAMEDVEQKRQAFKGNKDREADFRIMKHLLTFTARTP EGRGQGKMPVKREGIPAPVESFFETYVHDSFEHFSATGGTLQTDASTADYYHLRTVLQPVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52009; Mature: 51878
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVLTPKVRSVENMVQRARGATRKSSSPACPVCHLKAWISVFFDGTGNHRERDFPKCHS CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHH NVAALFDAHQDNPDEGIIRLYYEGLGRSFSFRERYEETKVYTRGGVRTLKTEGYQEADDR HHHHHHHCCCCCCCCHHHHHEEHHCCCCCHHHHHHHHHHEEECCCCEEECCCCCCCHHHH KLGKGFADGITERLEKALFELTDQIDRLRGKLNVDEINLAVFGFSRGSTEARAFLHWLAA HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH HSKVKKAGTKLTYDDVPLNVKFLGIFDTVESVGWAGTNKMPELIKTKVPAFVEKCTHIVA HHHHHHCCCEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH AHELRSAFPLTQVDRNHRCVVYPGAHADIGGGYEMDEQGRSSQLARIALLQMLDEARGAG HHHHHHHCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC LKMRSLGEMKASKRWDERFKPSFDVPATAQKSLNDYLAAVKPAGSMTHHFQAHMDHYWRW CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IDSGLAMEDVEQKRQAFKGNKDREADFRIMKHLLTFTARTPEGRGQGKMPVKREGIPAPV HHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH ESFFETYVHDSFEHFSATGGTLQTDASTADYYHLRTVLQPVG HHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCC >Mature Secondary Structure ADVLTPKVRSVENMVQRARGATRKSSSPACPVCHLKAWISVFFDGTGNHRERDFPKCHS CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHH NVAALFDAHQDNPDEGIIRLYYEGLGRSFSFRERYEETKVYTRGGVRTLKTEGYQEADDR HHHHHHHCCCCCCCCHHHHHEEHHCCCCCHHHHHHHHHHEEECCCCEEECCCCCCCHHHH KLGKGFADGITERLEKALFELTDQIDRLRGKLNVDEINLAVFGFSRGSTEARAFLHWLAA HHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH HSKVKKAGTKLTYDDVPLNVKFLGIFDTVESVGWAGTNKMPELIKTKVPAFVEKCTHIVA HHHHHHCCCEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH AHELRSAFPLTQVDRNHRCVVYPGAHADIGGGYEMDEQGRSSQLARIALLQMLDEARGAG HHHHHHHCCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC LKMRSLGEMKASKRWDERFKPSFDVPATAQKSLNDYLAAVKPAGSMTHHFQAHMDHYWRW CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IDSGLAMEDVEQKRQAFKGNKDREADFRIMKHLLTFTARTPEGRGQGKMPVKREGIPAPV HHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH ESFFETYVHDSFEHFSATGGTLQTDASTADYYHLRTVLQPVG HHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA