| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is 71907755
Identifier: 71907755
GI number: 71907755
Start: 2301348
End: 2301758
Strand: Reverse
Name: 71907755
Synonym: Daro_2131
Alternate gene names: NA
Gene position: 2301758-2301348 (Counterclockwise)
Preceding gene: 71907756
Following gene: 71907754
Centisome position: 51.14
GC content: 58.88
Gene sequence:
>411_bases ATGGTCGGTGACAATAATGGCGACACGCCGGATTCTTCTTGTCGCATTTCCGCTAGCCAACGGGCGTCACGCTTTGCCGC CGAGGCGATGAAGTTATTGCCGACCTTGCAGTGCAATGCACTGCGCAAGGTTTTCGACCGCCATGATTTTCTGCCGGAGG AGGTGGCCTCCCTTGGCTACAAGCGGCTCCAGCAGGCCGAAGGGATTGGCAACAAGGGCCTGGCGGCCATTACCGCCTGG CTGAACAACTACGGCTTCGAGTTGAACCCGCCACCGTTGAGCCCTCATGCCGGCGCAGCTCCCAAGCGGACGCGCCAGAG AATCGAACAGGCGCTTCGTTTACTTCGCACCCATGGTTACGAAATTGTTCCGCTATCAAGTGGCGATGGCAGCAAAGAAG GTCGGCGCTAG
Upstream 100 bases:
>100_bases GTATATCGATATGCCTATTTCGTCGTTCGCTTTGCCTGTTGCGCTGCCTAATGTTGTAGCGTCAGATAACTGATCTCAAC CCTTACGCATGTGATATTCC
Downstream 100 bases:
>100_bases GAAATTAACCGCCAGCGACTTCTATATGCCCGATTTGAATTTTTATTTAAGAATTTATTATTTCTGATTATAAGCGTGCT TCAATAAACTGGTCTCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MVGDNNGDTPDSSCRISASQRASRFAAEAMKLLPTLQCNALRKVFDRHDFLPEEVASLGYKRLQQAEGIGNKGLAAITAW LNNYGFELNPPPLSPHAGAAPKRTRQRIEQALRLLRTHGYEIVPLSSGDGSKEGRR
Sequences:
>Translated_136_residues MVGDNNGDTPDSSCRISASQRASRFAAEAMKLLPTLQCNALRKVFDRHDFLPEEVASLGYKRLQQAEGIGNKGLAAITAW LNNYGFELNPPPLSPHAGAAPKRTRQRIEQALRLLRTHGYEIVPLSSGDGSKEGRR >Mature_136_residues MVGDNNGDTPDSSCRISASQRASRFAAEAMKLLPTLQCNALRKVFDRHDFLPEEVASLGYKRLQQAEGIGNKGLAAITAW LNNYGFELNPPPLSPHAGAAPKRTRQRIEQALRLLRTHGYEIVPLSSGDGSKEGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14914; Mature: 14914
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGDNNGDTPDSSCRISASQRASRFAAEAMKLLPTLQCNALRKVFDRHDFLPEEVASLGY CCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH KRLQQAEGIGNKGLAAITAWLNNYGFELNPPPLSPHAGAAPKRTRQRIEQALRLLRTHGY HHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC EIVPLSSGDGSKEGRR EEEEECCCCCCCCCCC >Mature Secondary Structure MVGDNNGDTPDSSCRISASQRASRFAAEAMKLLPTLQCNALRKVFDRHDFLPEEVASLGY CCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH KRLQQAEGIGNKGLAAITAWLNNYGFELNPPPLSPHAGAAPKRTRQRIEQALRLLRTHGY HHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC EIVPLSSGDGSKEGRR EEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA