Click here to switch to the map view.

The map label for this gene is 71907736

Identifier: 71907736

GI number: 71907736

Start: 2279424

End: 2279915

Strand: Reverse

Name: 71907736

Synonym: Daro_2110

Alternate gene names: NA

Gene position: 2279915-2279424 (Counterclockwise)

Preceding gene: 71907742

Following gene: 71907735

Centisome position: 50.65

GC content: 50.61

Gene sequence:

>492_bases
ATGAATGACACTACAGCCCCGTTGGCCCTTGAGGTTCTTCAACAGTTTCGCGTGATCTACGGCAGCATGCGGCAGTATTT
TCGAGAGCTTGAGGAGTGCTTTGGATTGCCCGGTTCCCAGGCCTGGGTTCTTCAGGAGGTTGAACGTACGCCTGAAATCG
GGATCACCGACTTAGCTGGGAGGCTGGCGATTCATCAATCTACATGCAGCATTCTTGTTGAAAAGCTGGTCGCAAAAGGG
TATCTGGTCAAACGAAAAGCGACTAAGGATCAGCGACGAATAGGCTTGCGCCTAAGTGCGTCGGGCGAAGAGCTTATTGC
AAGATTGCCTGGTCCGGCGGAAGGCGTGCTTCCAGAGGCACTATCAAGCATCCCTTTGGTTAGCTTAAAAACATTGCATA
TCAATTTAGATGAGTTGATACAGCATATGCCAGGAAAGAATGAAACCTTTGCAGCAACGCCGCTGGCGGAGATGGTTCGT
GGCCAAGAGTAA

Upstream 100 bases:

>100_bases
CCCCTAAAACCTTTGTCGATAAGGATTGTTGTAACAGTCGCTCAAACTACATTGATTAGCAATATAATTTCAGCTCCGAA
TTTGTGCAACCAATCATTCA

Downstream 100 bases:

>100_bases
GCCCCGTGCAAAGTGGGGCATATGCATACTTGGAATATGCTGGCTAGTGGGATGCGCATCTCCGCTGCCAGTCCAACTGG
AAGCCAAACCTAAGCCAGTT

Product: regulatory protein, MarR

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Regulatory Protein MarR; MarR Family Transcription Regulator

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MNDTTAPLALEVLQQFRVIYGSMRQYFRELEECFGLPGSQAWVLQEVERTPEIGITDLAGRLAIHQSTCSILVEKLVAKG
YLVKRKATKDQRRIGLRLSASGEELIARLPGPAEGVLPEALSSIPLVSLKTLHINLDELIQHMPGKNETFAATPLAEMVR
GQE

Sequences:

>Translated_163_residues
MNDTTAPLALEVLQQFRVIYGSMRQYFRELEECFGLPGSQAWVLQEVERTPEIGITDLAGRLAIHQSTCSILVEKLVAKG
YLVKRKATKDQRRIGLRLSASGEELIARLPGPAEGVLPEALSSIPLVSLKTLHINLDELIQHMPGKNETFAATPLAEMVR
GQE
>Mature_163_residues
MNDTTAPLALEVLQQFRVIYGSMRQYFRELEECFGLPGSQAWVLQEVERTPEIGITDLAGRLAIHQSTCSILVEKLVAKG
YLVKRKATKDQRRIGLRLSASGEELIARLPGPAEGVLPEALSSIPLVSLKTLHINLDELIQHMPGKNETFAATPLAEMVR
GQE

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18035; Mature: 18035

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTTAPLALEVLQQFRVIYGSMRQYFRELEECFGLPGSQAWVLQEVERTPEIGITDLAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHH
RLAIHQSTCSILVEKLVAKGYLVKRKATKDQRRIGLRLSASGEELIARLPGPAEGVLPEA
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEECCCHHHHHHHCCCCCCCCHHHH
LSSIPLVSLKTLHINLDELIQHMPGKNETFAATPLAEMVRGQE
HHHCCCEEHHEEEECHHHHHHHCCCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MNDTTAPLALEVLQQFRVIYGSMRQYFRELEECFGLPGSQAWVLQEVERTPEIGITDLAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHH
RLAIHQSTCSILVEKLVAKGYLVKRKATKDQRRIGLRLSASGEELIARLPGPAEGVLPEA
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCEECCCHHHHHHHCCCCCCCCHHHH
LSSIPLVSLKTLHINLDELIQHMPGKNETFAATPLAEMVRGQE
HHHCCCEEHHEEEECHHHHHHHCCCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA