| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is yqjD [C]
Identifier: 71907678
GI number: 71907678
Start: 2211359
End: 2211709
Strand: Reverse
Name: yqjD [C]
Synonym: Daro_2050
Alternate gene names: 71907678
Gene position: 2211709-2211359 (Counterclockwise)
Preceding gene: 71907683
Following gene: 71907677
Centisome position: 49.14
GC content: 58.97
Gene sequence:
>351_bases ATGTCAGAGGAATGGAATGGCCATCCAGTCGGATGGTCCGTCCTTCCCTACAACCACGCATTGCAGACACCAGGAGAAAT CATGAGTACAGAAATCACTACCACCCCGGGATCGACCGAAAACCCGAAGGAAAGCCTGTTCAAAGGGATGGTCGGCAAGG CCGACCATCTGCTCAAGGACGCCAGCCATTCCGTGGCCGAAGAGTTCTCCGCAACGCGCCATGCGGTGTCGGAAAAGGCT TGTGGCGCCGCCAATTTAACCCACGAATACGTGCGGGCGAATCCCTGGAAAGTCGCCGGCATCGCCGCGGCCGCCGGTGT CTTCATCGGCGCCTTGATCATCCGCCGCTGA
Upstream 100 bases:
>100_bases GGGCATTAACGATTAATGCGGTGCCTCTCATCTTACGGAGGCGATCACCGTGGTCTGTTCGCCAGCGCACAGACCCGGCA TTTGCCAGCACTGAAGATGC
Downstream 100 bases:
>100_bases TCCACGCATACCCCCATCAATTCAGGAGGCATCAATGTCTAGTGTCGGTTATCACGAACCCGTCGACGAACTACCCGCCG AAATCCGCGACATGCACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSEEWNGHPVGWSVLPYNHALQTPGEIMSTEITTTPGSTENPKESLFKGMVGKADHLLKDASHSVAEEFSATRHAVSEKA CGAANLTHEYVRANPWKVAGIAAAAGVFIGALIIRR
Sequences:
>Translated_116_residues MSEEWNGHPVGWSVLPYNHALQTPGEIMSTEITTTPGSTENPKESLFKGMVGKADHLLKDASHSVAEEFSATRHAVSEKA CGAANLTHEYVRANPWKVAGIAAAAGVFIGALIIRR >Mature_115_residues SEEWNGHPVGWSVLPYNHALQTPGEIMSTEITTTPGSTENPKESLFKGMVGKADHLLKDASHSVAEEFSATRHAVSEKAC GAANLTHEYVRANPWKVAGIAAAAGVFIGALIIRR
Specific function: Unknown
COG id: COG4575
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12425; Mature: 12294
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEWNGHPVGWSVLPYNHALQTPGEIMSTEITTTPGSTENPKESLFKGMVGKADHLLKD CCCCCCCCCCCEEECCCCCCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHCCHHHHHHHH ASHSVAEEFSATRHAVSEKACGAANLTHEYVRANPWKVAGIAAAAGVFIGALIIRR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEEWNGHPVGWSVLPYNHALQTPGEIMSTEITTTPGSTENPKESLFKGMVGKADHLLKD CCCCCCCCCCEEECCCCCCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHCCHHHHHHHH ASHSVAEEFSATRHAVSEKACGAANLTHEYVRANPWKVAGIAAAAGVFIGALIIRR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA