| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907601
Identifier: 71907601
GI number: 71907601
Start: 2121101
End: 2122357
Strand: Reverse
Name: 71907601
Synonym: Daro_1972
Alternate gene names: NA
Gene position: 2122357-2121101 (Counterclockwise)
Preceding gene: 71907608
Following gene: 71907600
Centisome position: 47.15
GC content: 62.29
Gene sequence:
>1257_bases ATGAGCTTCGTCGTTCCCGAACTGGCTGCTCCCGTCGAGGCTTTTTCAACGGCGCTCGGTATCGGTCTGCTGATCGGCAT GGAGCGCGAACGCCGTCCTGAAGCCTCGGCCGGCCTGAGAACCTTCGCGCTGGTCGCCATGCTGGGCTGCCTCTTTGCCC TGCTTGGTGACAAAACCGGTGGTCCCTGGCTGCTGGTTGCCGGCCTGCTGGTCATTTCCGGCAGCATGATCGCCTCGAAT TTTTCGGCCCAGCAGGAAGAGCAATATCGGGGCTTTACCTCGGAAGCGGCGATCATCGTCACCTATGCGCTGGGCGCCGC CGTCTGGTTCGGCTATTCGACGCTGGCTGTCATGCTCGCCATCACGACCACCGTGCTCCTCTATTTCAAGGCCGAACTCC GGCAATTCAGCGAACGCACGACACCGAAGGATATCAACTCCATCCTGCAGTTTGCCGTGTTGTCGCTGGTCATCCTGCCC ATCCTGCCGAGCGAGGATTTCGGCCCCTACAACGCGATCAATCCGCGCCAGGTCTGGTACATGGTCGTGCTGATCTCCGG GCTGGCACTGGCCGGCTATCTCGCCTTGCGCATCATCGGCGCCCGCCACGGCGCGGCATTGCTTGGCATTTTCGGCGGCC TGGCGTCGTCGACCGCAACGACCATGATGTTCTCGCGTCACGCCCGCGACCATGTTCATCTGGTCCATATGTCCGCTATC GTGATCCTGATCGCCAACGTGATGGTCATGATCCGCCTTTGGCTGGTTGCCGGCGTGGTCGCCCCCGGCTTGGCCACACC GATCGCCATCGTCTTCGCCTGCGGCATCGTTCCCGGGGTGGCCATGTCGCTCTACGGCTGGAGGGTTTTAAGCGCGGCCG GCGAATTGCCGATGCCCGAGGTCAAGAACCCGACAGAGCTGAAGACAGCCCTGTCCTTTGGTCTGCTTTACGCCGTGGTG CTGCTCGCCTCCGCCTGGTTGCAGGATATTGCCGGCAGCAGCGGCCTGTATATCGTCGCCCTGGTTTCCGGCCTGACCGA TGCGGACGCCAGCGTGCTGTCCACCCTGCGCATGTTCAATCTGGAAAAAGTCGCCAGTGGCGATGCCGTGATCGCCGTCA CGCTGGCGCTGATGGCCAACCTGATCTTCAAGATCAGCCTGGTCATCAGCATCGGCGGTGGCAAGCTGGCCCGCCATGCC CTTCCCGGCCTGCTCGCCATCGGTAGCGGCATGGCCGTCGGTTTGATGCTCGTTTAA
Upstream 100 bases:
>100_bases TCGGCGCCGAAGCGGGAACCGCTGCCGGCAGCGGGAACGATTGCGTAATGACGTGGCATGGCTTAATTTTACTGAATAAC GATCAGAAAAGAGGAATCGC
Downstream 100 bases:
>100_bases GGAGCTGACCATGATCAATACCCGCCCCCCTGCCGTCGCCGGCACCTTCTACCCCGGCGATCCCGAGACGCTATCCACCA CCGTCGATCGCTTTCTGGCC
Product: MgtC/SapB transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MSFVVPELAAPVEAFSTALGIGLLIGMERERRPEASAGLRTFALVAMLGCLFALLGDKTGGPWLLVAGLLVISGSMIASN FSAQQEEQYRGFTSEAAIIVTYALGAAVWFGYSTLAVMLAITTTVLLYFKAELRQFSERTTPKDINSILQFAVLSLVILP ILPSEDFGPYNAINPRQVWYMVVLISGLALAGYLALRIIGARHGAALLGIFGGLASSTATTMMFSRHARDHVHLVHMSAI VILIANVMVMIRLWLVAGVVAPGLATPIAIVFACGIVPGVAMSLYGWRVLSAAGELPMPEVKNPTELKTALSFGLLYAVV LLASAWLQDIAGSSGLYIVALVSGLTDADASVLSTLRMFNLEKVASGDAVIAVTLALMANLIFKISLVISIGGGKLARHA LPGLLAIGSGMAVGLMLV
Sequences:
>Translated_418_residues MSFVVPELAAPVEAFSTALGIGLLIGMERERRPEASAGLRTFALVAMLGCLFALLGDKTGGPWLLVAGLLVISGSMIASN FSAQQEEQYRGFTSEAAIIVTYALGAAVWFGYSTLAVMLAITTTVLLYFKAELRQFSERTTPKDINSILQFAVLSLVILP ILPSEDFGPYNAINPRQVWYMVVLISGLALAGYLALRIIGARHGAALLGIFGGLASSTATTMMFSRHARDHVHLVHMSAI VILIANVMVMIRLWLVAGVVAPGLATPIAIVFACGIVPGVAMSLYGWRVLSAAGELPMPEVKNPTELKTALSFGLLYAVV LLASAWLQDIAGSSGLYIVALVSGLTDADASVLSTLRMFNLEKVASGDAVIAVTLALMANLIFKISLVISIGGGKLARHA LPGLLAIGSGMAVGLMLV >Mature_417_residues SFVVPELAAPVEAFSTALGIGLLIGMERERRPEASAGLRTFALVAMLGCLFALLGDKTGGPWLLVAGLLVISGSMIASNF SAQQEEQYRGFTSEAAIIVTYALGAAVWFGYSTLAVMLAITTTVLLYFKAELRQFSERTTPKDINSILQFAVLSLVILPI LPSEDFGPYNAINPRQVWYMVVLISGLALAGYLALRIIGARHGAALLGIFGGLASSTATTMMFSRHARDHVHLVHMSAIV ILIANVMVMIRLWLVAGVVAPGLATPIAIVFACGIVPGVAMSLYGWRVLSAAGELPMPEVKNPTELKTALSFGLLYAVVL LASAWLQDIAGSSGLYIVALVSGLTDADASVLSTLRMFNLEKVASGDAVIAVTLALMANLIFKISLVISIGGGKLARHAL PGLLAIGSGMAVGLMLV
Specific function: Unknown
COG id: COG3174
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To P.aeruginosa PA0043 and M.thermoautotrophicum MTH1451 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43960; Mature: 43829
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVVPELAAPVEAFSTALGIGLLIGMERERRPEASAGLRTFALVAMLGCLFALLGDKTG CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GPWLLVAGLLVISGSMIASNFSAQQEEQYRGFTSEAAIIVTYALGAAVWFGYSTLAVMLA CCHHHHHHHHHHCCHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ITTTVLLYFKAELRQFSERTTPKDINSILQFAVLSLVILPILPSEDFGPYNAINPRQVWY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH MVVLISGLALAGYLALRIIGARHGAALLGIFGGLASSTATTMMFSRHARDHVHLVHMSAI HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH VILIANVMVMIRLWLVAGVVAPGLATPIAIVFACGIVPGVAMSLYGWRVLSAAGELPMPE HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VKNPTELKTALSFGLLYAVVLLASAWLQDIAGSSGLYIVALVSGLTDADASVLSTLRMFN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCHHHHHHHHHHHH LEKVASGDAVIAVTLALMANLIFKISLVISIGGGKLARHALPGLLAIGSGMAVGLMLV HHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCCHHHHHCCCHHHHHEEC >Mature Secondary Structure SFVVPELAAPVEAFSTALGIGLLIGMERERRPEASAGLRTFALVAMLGCLFALLGDKTG CCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GPWLLVAGLLVISGSMIASNFSAQQEEQYRGFTSEAAIIVTYALGAAVWFGYSTLAVMLA CCHHHHHHHHHHCCHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ITTTVLLYFKAELRQFSERTTPKDINSILQFAVLSLVILPILPSEDFGPYNAINPRQVWY HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH MVVLISGLALAGYLALRIIGARHGAALLGIFGGLASSTATTMMFSRHARDHVHLVHMSAI HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH VILIANVMVMIRLWLVAGVVAPGLATPIAIVFACGIVPGVAMSLYGWRVLSAAGELPMPE HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC VKNPTELKTALSFGLLYAVVLLASAWLQDIAGSSGLYIVALVSGLTDADASVLSTLRMFN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCCHHHHHHHHHHHH LEKVASGDAVIAVTLALMANLIFKISLVISIGGGKLARHALPGLLAIGSGMAVGLMLV HHHHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCCHHHHHCCCHHHHHEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]