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The map label for this gene is ydiS [C]

Identifier: 71907565

GI number: 71907565

Start: 2084568

End: 2086214

Strand: Reverse

Name: ydiS [C]

Synonym: Daro_1936

Alternate gene names: 71907565

Gene position: 2086214-2084568 (Counterclockwise)

Preceding gene: 71907574

Following gene: 71907564

Centisome position: 46.35

GC content: 59.38

Gene sequence:

>1647_bases
ATGGAACGCGAATCCATGGAATTTGACGTCGTCATCATTGGTGGCGGCCCGGCTGGCTTGGCTTCGGCCATTCGGCTGAA
GCAACTGGCAGCAGAAAAAGGAACTGATCTGGGCGTCTGCCTGATCGAAAAAGGCGCCGAAATTGGCGCCCATATTCTTT
CCGGTGCCGTCATGGACCCGCGCGCCCTGACTGAGCTTCTACCCGACTGGCAGAAAGACGGCGCCCCGCTCAACGCCCCC
GTTTCCGAAGACCGCTTCTTTATCCTCTCCGAAACCGGCGCCACCAAGGTACCGAACAGCCTGCTGCCCAACTGCTTCCA
TAACGAAGGCAATTACGTCATCTCGCTGGGCAATGTCTGCCGCTGGCTCGGCGAACAGGCGGAAGCCTTGGGCGTTGAAA
TCTACCCCGGCTTTGCCGGTGCCGAAGTGCTGTTCGACGAAAACGGTGCCGTCAAGGGTGTAGCCACGGGCGACATGGGT
CGCCTGCACGACGGTTCCGAAGGCCCGAATTTCCAGATGGGCATGGAACTGCTCGGCAAATACACGTTTTTCGCTGAAGG
TTGTCGCGGCCATCTCGGCAAGCAGCTGATGGAGAAATTCAACCTCAATGCCGACGCCGACCCGCAAACCTATGGCATCG
GCCTCAAGGAACTGTGGGAAATCGAGCCGGACAAACACCAGCTCGGCCTCGTCATCCACAGCGGCGGCTGGCCGATGCAG
CCGGACACCTACGGTGGCGGCTTTCTCTACCATCTGGAAAACAACCAGATCGCCGTCGGCTTTGTCGTCGGACTTGGTTA
CAGCAACCCGCACCTGTCGCCCTACGAGGAATTCCAGCGTTTCAAGACACATCCGGAAATCCGCAAGTTCCTAGAAGGTG
GCAAGCGCATCGCCTATGGTGCCCGCGCGCTGACCGCCGGTGGCCTGCAGTCCTTGCCCAAGCTGACCTTCCCCGGCGGC
GTCCTGATCGGTGACGATGCCGGCTTGCTGAATGCCGCCCGGATCAAGGGGTCGCACTGCGCCATCAAATCCGGCGCCCT
GGCGGCTGAGGCCTGCTTCGAAGCGCTGACGGCCGAACGCCAGCACGACGAACTGACTGCCTACCCGGAAACCTTCAAGA
AGAGCTGGCTGTTCGAAGAGCTGCATCAGACGCGCAATTTCAAGCCATGGATGGCCAAGGGCCTGATGCTCGGCTCCATC
ATGTTCGGCATTGACCAGGTTCTGCTGCGCGGCAAGGCACCATGGACGCTGCATCACACGACCCCCGACCACGCCAAACT
GAAACCAGCAGCCGAATGCGAACCCATCGCCTACCCCAAGCCGGATGGCGTGATCACCTTTGACCGCCTGTCCTCCGTTT
TCCTCTCCAGCACCAATCACGAGGAAGACCAGCCCTGCCATCTGCAGTTGAAAGACGCCAGCATTCCTATCAGCGTCAAT
CTCGCCAAATACGACGCCCCGGAACAGCGTTTCTGCCCGGCTGGCGTCTATGAAATCCTGCGCGATGAAAGCGGTGGTAA
CCCGCGCCTGCAGATCAACGCGCAGAATTGCGTACATTGCAAGACCTGCGATATCAAGGATCCAACCCAGAACATCAACT
GGGTTGTTCCGCAAGGTGGCGAAGGCCCAACTTACCCCAATATGTAA

Upstream 100 bases:

>100_bases
CTTGTGTTCCATAATCCTGAATACTAGAGTGGTGTTGATCAAAGCATTTCCATACTGTACCGTATTGAAAATAAGCTAAC
AATAAAACTTAGGAGACATC

Downstream 100 bases:

>100_bases
GCAGAAACCGGAAACCGCGTTCGCATACCGCGAATCGCGGTTTCCCGGTTTATAATCTTGCGGCTAAACCCCTTAGGGAG
AACAACACATGGGCTTTCTC

Product: electron transfer flavoprotein-ubiquinone oxidoreductase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MERESMEFDVVIIGGGPAGLASAIRLKQLAAEKGTDLGVCLIEKGAEIGAHILSGAVMDPRALTELLPDWQKDGAPLNAP
VSEDRFFILSETGATKVPNSLLPNCFHNEGNYVISLGNVCRWLGEQAEALGVEIYPGFAGAEVLFDENGAVKGVATGDMG
RLHDGSEGPNFQMGMELLGKYTFFAEGCRGHLGKQLMEKFNLNADADPQTYGIGLKELWEIEPDKHQLGLVIHSGGWPMQ
PDTYGGGFLYHLENNQIAVGFVVGLGYSNPHLSPYEEFQRFKTHPEIRKFLEGGKRIAYGARALTAGGLQSLPKLTFPGG
VLIGDDAGLLNAARIKGSHCAIKSGALAAEACFEALTAERQHDELTAYPETFKKSWLFEELHQTRNFKPWMAKGLMLGSI
MFGIDQVLLRGKAPWTLHHTTPDHAKLKPAAECEPIAYPKPDGVITFDRLSSVFLSSTNHEEDQPCHLQLKDASIPISVN
LAKYDAPEQRFCPAGVYEILRDESGGNPRLQINAQNCVHCKTCDIKDPTQNINWVVPQGGEGPTYPNM

Sequences:

>Translated_548_residues
MERESMEFDVVIIGGGPAGLASAIRLKQLAAEKGTDLGVCLIEKGAEIGAHILSGAVMDPRALTELLPDWQKDGAPLNAP
VSEDRFFILSETGATKVPNSLLPNCFHNEGNYVISLGNVCRWLGEQAEALGVEIYPGFAGAEVLFDENGAVKGVATGDMG
RLHDGSEGPNFQMGMELLGKYTFFAEGCRGHLGKQLMEKFNLNADADPQTYGIGLKELWEIEPDKHQLGLVIHSGGWPMQ
PDTYGGGFLYHLENNQIAVGFVVGLGYSNPHLSPYEEFQRFKTHPEIRKFLEGGKRIAYGARALTAGGLQSLPKLTFPGG
VLIGDDAGLLNAARIKGSHCAIKSGALAAEACFEALTAERQHDELTAYPETFKKSWLFEELHQTRNFKPWMAKGLMLGSI
MFGIDQVLLRGKAPWTLHHTTPDHAKLKPAAECEPIAYPKPDGVITFDRLSSVFLSSTNHEEDQPCHLQLKDASIPISVN
LAKYDAPEQRFCPAGVYEILRDESGGNPRLQINAQNCVHCKTCDIKDPTQNINWVVPQGGEGPTYPNM
>Mature_548_residues
MERESMEFDVVIIGGGPAGLASAIRLKQLAAEKGTDLGVCLIEKGAEIGAHILSGAVMDPRALTELLPDWQKDGAPLNAP
VSEDRFFILSETGATKVPNSLLPNCFHNEGNYVISLGNVCRWLGEQAEALGVEIYPGFAGAEVLFDENGAVKGVATGDMG
RLHDGSEGPNFQMGMELLGKYTFFAEGCRGHLGKQLMEKFNLNADADPQTYGIGLKELWEIEPDKHQLGLVIHSGGWPMQ
PDTYGGGFLYHLENNQIAVGFVVGLGYSNPHLSPYEEFQRFKTHPEIRKFLEGGKRIAYGARALTAGGLQSLPKLTFPGG
VLIGDDAGLLNAARIKGSHCAIKSGALAAEACFEALTAERQHDELTAYPETFKKSWLFEELHQTRNFKPWMAKGLMLGSI
MFGIDQVLLRGKAPWTLHHTTPDHAKLKPAAECEPIAYPKPDGVITFDRLSSVFLSSTNHEEDQPCHLQLKDASIPISVN
LAKYDAPEQRFCPAGVYEILRDESGGNPRLQINAQNCVHCKTCDIKDPTQNINWVVPQGGEGPTYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=558, Percent_Identity=58.4229390681004, Blast_Score=655, Evalue=0.0,
Organism=Escherichia coli, GI1787991, Length=404, Percent_Identity=26.7326732673267, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1786227, Length=441, Percent_Identity=26.0770975056689, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI87082155, Length=364, Percent_Identity=25.8241758241758, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI25144720, Length=559, Percent_Identity=54.2039355992844, Blast_Score=600, Evalue=1e-172,
Organism=Saccharomyces cerevisiae, GI6324932, Length=568, Percent_Identity=46.6549295774648, Blast_Score=500, Evalue=1e-142,
Organism=Drosophila melanogaster, GI24652256, Length=555, Percent_Identity=59.2792792792793, Blast_Score=661, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 59737; Mature: 59737

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERESMEFDVVIIGGGPAGLASAIRLKQLAAEKGTDLGVCLIEKGAEIGAHILSGAVMDP
CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCH
RALTELLPDWQKDGAPLNAPVSEDRFFILSETGATKVPNSLLPNCFHNEGNYVISLGNVC
HHHHHHCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCEEEEHHHHH
RWLGEQAEALGVEIYPGFAGAEVLFDENGAVKGVATGDMGRLHDGSEGPNFQMGMELLGK
HHHCCHHHHCEEEEECCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
YTFFAEGCRGHLGKQLMEKFNLNADADPQTYGIGLKELWEIEPDKHQLGLVIHSGGWPMQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHCCCCCCCEEEEEEECCCCCCC
PDTYGGGFLYHLENNQIAVGFVVGLGYSNPHLSPYEEFQRFKTHPEIRKFLEGGKRIAYG
CCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHCCCEEEEC
ARALTAGGLQSLPKLTFPGGVLIGDDAGLLNAARIKGSHCAIKSGALAAEACFEALTAER
CHHHHHCCHHHCCCCCCCCCEEEECCCCCCCHHHCCCCCEEECCCCHHHHHHHHHHHHHC
QHDELTAYPETFKKSWLFEELHQTRNFKPWMAKGLMLGSIMFGIDQVLLRGKAPWTLHHT
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
TPDHAKLKPAAECEPIAYPKPDGVITFDRLSSVFLSSTNHEEDQPCHLQLKDASIPISVN
CCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEE
LAKYDAPEQRFCPAGVYEILRDESGGNPRLQINAQNCVHCKTCDIKDPTQNINWVVPQGG
EECCCCCHHHCCCHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEECCC
EGPTYPNM
CCCCCCCC
>Mature Secondary Structure
MERESMEFDVVIIGGGPAGLASAIRLKQLAAEKGTDLGVCLIEKGAEIGAHILSGAVMDP
CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCH
RALTELLPDWQKDGAPLNAPVSEDRFFILSETGATKVPNSLLPNCFHNEGNYVISLGNVC
HHHHHHCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCCEEEEHHHHH
RWLGEQAEALGVEIYPGFAGAEVLFDENGAVKGVATGDMGRLHDGSEGPNFQMGMELLGK
HHHCCHHHHCEEEEECCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHH
YTFFAEGCRGHLGKQLMEKFNLNADADPQTYGIGLKELWEIEPDKHQLGLVIHSGGWPMQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHCCCCCCCEEEEEEECCCCCCC
PDTYGGGFLYHLENNQIAVGFVVGLGYSNPHLSPYEEFQRFKTHPEIRKFLEGGKRIAYG
CCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHCCCEEEEC
ARALTAGGLQSLPKLTFPGGVLIGDDAGLLNAARIKGSHCAIKSGALAAEACFEALTAER
CHHHHHCCHHHCCCCCCCCCEEEECCCCCCCHHHCCCCCEEECCCCHHHHHHHHHHHHHC
QHDELTAYPETFKKSWLFEELHQTRNFKPWMAKGLMLGSIMFGIDQVLLRGKAPWTLHHT
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
TPDHAKLKPAAECEPIAYPKPDGVITFDRLSSVFLSSTNHEEDQPCHLQLKDASIPISVN
CCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEE
LAKYDAPEQRFCPAGVYEILRDESGGNPRLQINAQNCVHCKTCDIKDPTQNINWVVPQGG
EECCCCCHHHCCCHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEECCC
EGPTYPNM
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]