Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

Click here to switch to the map view.

The map label for this gene is 71907533

Identifier: 71907533

GI number: 71907533

Start: 2047175

End: 2047537

Strand: Reverse

Name: 71907533

Synonym: Daro_1904

Alternate gene names: NA

Gene position: 2047537-2047175 (Counterclockwise)

Preceding gene: 71907534

Following gene: 71907530

Centisome position: 45.49

GC content: 60.33

Gene sequence:

>363_bases
GTGAGCCTGAAAACGTCGCTGGGGGCCGTTGCCCCCTACATCACCAAGGATGGCTCGGAGATACGCGAATTGCTGCACCC
CAACCTGCACGCAGTTCGTCACCAAAGCCTGGCCGAAGCAGTCGTTCCGCCCGGCACCGCCACCCAACTGCACAAACATG
GGGTCACCGAAGAGATTTATCACGTGACCAAGGGTAGCGGCTTGATGACGCTGGGCGGTGACAGCTTTGTCATCGCAGTT
GGCGACAGCATCGCGATCGCGCCGGGAACACCGCACTGCGTGGAAAACACGGGGCCGGAAGCGCTGCACATCCTGTGCTG
CTGTGCACCCGCTTATTCACACGACGATACCGAACTACTCTGA

Upstream 100 bases:

>100_bases
AACGCAATGTGCTGATCTATCTGGCAATCAGCCGCAAGATCATCGAAGGCGCCCCGGCCAATGCCATCTCGACCGTACCT
ATCCAGCCGTGGGGCGGCAA

Downstream 100 bases:

>100_bases
CTTTCTGAATTGCCCGTCCTCCGGACGATCAAGCTTCAGCCAAAGCCAAAATCGCTTCTGGCAGACCGCCGATAACCAAT
GGCACCGGCACGGCCAGCAT

Product: cupin region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSLKTSLGAVAPYITKDGSEIRELLHPNLHAVRHQSLAEAVVPPGTATQLHKHGVTEEIYHVTKGSGLMTLGGDSFVIAV
GDSIAIAPGTPHCVENTGPEALHILCCCAPAYSHDDTELL

Sequences:

>Translated_120_residues
MSLKTSLGAVAPYITKDGSEIRELLHPNLHAVRHQSLAEAVVPPGTATQLHKHGVTEEIYHVTKGSGLMTLGGDSFVIAV
GDSIAIAPGTPHCVENTGPEALHILCCCAPAYSHDDTELL
>Mature_119_residues
SLKTSLGAVAPYITKDGSEIRELLHPNLHAVRHQSLAEAVVPPGTATQLHKHGVTEEIYHVTKGSGLMTLGGDSFVIAVG
DSIAIAPGTPHCVENTGPEALHILCCCAPAYSHDDTELL

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 12602; Mature: 12471

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKTSLGAVAPYITKDGSEIRELLHPNLHAVRHQSLAEAVVPPGTATQLHKHGVTEEIY
CCCCCCCCCCCCEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHH
HVTKGSGLMTLGGDSFVIAVGDSIAIAPGTPHCVENTGPEALHILCCCAPAYSHDDTELL
EEECCCEEEEECCCEEEEEECCEEEECCCCCCCCCCCCCHHEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SLKTSLGAVAPYITKDGSEIRELLHPNLHAVRHQSLAEAVVPPGTATQLHKHGVTEEIY
CCCCCCCCCCCEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHH
HVTKGSGLMTLGGDSFVIAVGDSIAIAPGTPHCVENTGPEALHILCCCAPAYSHDDTELL
EEECCCEEEEECCCEEEEEECCEEEECCCCCCCCCCCCCHHEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]