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The map label for this gene is fccB [H]

Identifier: 71907442

GI number: 71907442

Start: 1948010

End: 1949344

Strand: Reverse

Name: fccB [H]

Synonym: Daro_1813

Alternate gene names: 71907442

Gene position: 1949344-1948010 (Counterclockwise)

Preceding gene: 71907443

Following gene: 71907441

Centisome position: 43.31

GC content: 61.05

Gene sequence:

>1335_bases
ATGACCTTCAATCGCCGGCAATTCCTGGCGGCAGGTGCAGCGCTGGGGGCCACGACGGCCATCGCCCAGCCGACCAGCCC
GCTGCCTTTCCTGATCAACATGCAGTCCGACCCGCTGCTGCCCAAAGCCACCGGCAAGCGCGTCGTCATCTGTGGCGGCG
GCTGGGGCGGCATCAGCGCCGCCAAACACCTGAAGAAACTCGATCCGACGCTGGAAGTCGTGGTGCTCGAACGCAACCCG
GTTTTCTTCTCCTGCCCGATGAGCAACAAGTGGCTAGTCGATATCGTCGACGTCCAGTTCCTGACCTTCAGCTACCTCGA
AGTCGCCCAGAAATACGACTACCGCTTTATCCAGACCGAAGTCACCGCCTTCGAGCGTGAGCGCAAACGCGTCATCACCG
CCCAAGGCTGGCTCGATTACGACTACCTGATCATCGGCAGCGGCATCCGTTACAACTACGAGGCCTGGTTTGGCAACGAC
CGCAAGGCAGCGGAATACACCCGCGCCATGTTCCCGGCTGCCTACATCCCGAACGCCGAGCATTTCCGCCTCAAGCAAAG
CATCCAGAATTTCAAGGGCGGCGACCTGGTCATGACCCTGCCGCCACCGCCGCATCGCTGCCCGCCGTCGCCCTATGAGC
GTGCCTGTTTGATCGCCGGCCTGTTCAAGGAGCGCAAGATCAAGGGGCGAATCACCATCCTCGACCCAAAACCGAGCCCG
GCGCCGATCACTGGCGGCTTCCAGGAAGCCTTCGAGAACCTCTACAAGGACCAGATCACCTACGTGCCAAAGGCCGTCAT
TCAGGAAGTCGATCCCTACAACAAGAAGATCAAGACCGCAGTGGGCGACTTCCGCTTCGACCACAGCATCCTGATGGCCC
CGCACCAGGCCGGCGACATGGCCTGGAAGGCCGGCGTGATCGGCAAGAACGACGAAGGCAAGCCGACCGGCTGGGCCGGC
GTCGATCCCTTCTTCCTGAACATGAAGGACGACCCGGACGTTTACGTGATTGGTGACTCGGTCGGCATGGTTTCGCCGCA
GTTCCGCTTCTACCCGAAGGCCGGACACGTCGCCAACTACCAGGGCCGCATCGTCGCCAAATACATTGCCGAACGCGTCA
AGGGGCGCGAGCCGAAGTACGCCCTGCCGGACAACCTGTGCTTCATGATGGTCAATACCGCCCCGCGTGAAGACGTTGCC
GTGCGCTTCAAATACTACGTCAACGACAAGGGCATCATCATCCAGGATCAGGACGACGACAATTTGCGCCGCGAAGAAGT
GGTCACCGAAGACTTCGCCTGGGCCGGGCGGATGTACGAGGACATGTTCGGCTAA

Upstream 100 bases:

>100_bases
GTCTGCGTACCGCCTGCTGTTTTCTTTCGTGCCTGAAAAGGCACCCCCGTAAATCCGGGCATCTCCGTGTCCGGGTGGTT
CAAATAATGGAGAAGAGAGC

Downstream 100 bases:

>100_bases
ACCGCCAGCGTCCCCGCCCGGCAAGGCGGGGACGTGCCAAAATACGGCTTTTGACGAAATCTTCAGCGCCATGTCCCACT
TTCTTTTCCTCAATGCCAGC

Product: sulfide dehydrogenase (flavocytochrome), flavoprotein subunit

Products: NA

Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MTFNRRQFLAAGAALGATTAIAQPTSPLPFLINMQSDPLLPKATGKRVVICGGGWGGISAAKHLKKLDPTLEVVVLERNP
VFFSCPMSNKWLVDIVDVQFLTFSYLEVAQKYDYRFIQTEVTAFERERKRVITAQGWLDYDYLIIGSGIRYNYEAWFGND
RKAAEYTRAMFPAAYIPNAEHFRLKQSIQNFKGGDLVMTLPPPPHRCPPSPYERACLIAGLFKERKIKGRITILDPKPSP
APITGGFQEAFENLYKDQITYVPKAVIQEVDPYNKKIKTAVGDFRFDHSILMAPHQAGDMAWKAGVIGKNDEGKPTGWAG
VDPFFLNMKDDPDVYVIGDSVGMVSPQFRFYPKAGHVANYQGRIVAKYIAERVKGREPKYALPDNLCFMMVNTAPREDVA
VRFKYYVNDKGIIIQDQDDDNLRREEVVTEDFAWAGRMYEDMFG

Sequences:

>Translated_444_residues
MTFNRRQFLAAGAALGATTAIAQPTSPLPFLINMQSDPLLPKATGKRVVICGGGWGGISAAKHLKKLDPTLEVVVLERNP
VFFSCPMSNKWLVDIVDVQFLTFSYLEVAQKYDYRFIQTEVTAFERERKRVITAQGWLDYDYLIIGSGIRYNYEAWFGND
RKAAEYTRAMFPAAYIPNAEHFRLKQSIQNFKGGDLVMTLPPPPHRCPPSPYERACLIAGLFKERKIKGRITILDPKPSP
APITGGFQEAFENLYKDQITYVPKAVIQEVDPYNKKIKTAVGDFRFDHSILMAPHQAGDMAWKAGVIGKNDEGKPTGWAG
VDPFFLNMKDDPDVYVIGDSVGMVSPQFRFYPKAGHVANYQGRIVAKYIAERVKGREPKYALPDNLCFMMVNTAPREDVA
VRFKYYVNDKGIIIQDQDDDNLRREEVVTEDFAWAGRMYEDMFG
>Mature_443_residues
TFNRRQFLAAGAALGATTAIAQPTSPLPFLINMQSDPLLPKATGKRVVICGGGWGGISAAKHLKKLDPTLEVVVLERNPV
FFSCPMSNKWLVDIVDVQFLTFSYLEVAQKYDYRFIQTEVTAFERERKRVITAQGWLDYDYLIIGSGIRYNYEAWFGNDR
KAAEYTRAMFPAAYIPNAEHFRLKQSIQNFKGGDLVMTLPPPPHRCPPSPYERACLIAGLFKERKIKGRITILDPKPSPA
PITGGFQEAFENLYKDQITYVPKAVIQEVDPYNKKIKTAVGDFRFDHSILMAPHQAGDMAWKAGVIGKNDEGKPTGWAGV
DPFFLNMKDDPDVYVIGDSVGMVSPQFRFYPKAGHVANYQGRIVAKYIAERVKGREPKYALPDNLCFMMVNTAPREDVAV
RFKYYVNDKGIIIQDQDDDNLRREEVVTEDFAWAGRMYEDMFG

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR015323
- InterPro:   IPR015904
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 50219; Mature: 50088

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFNRRQFLAAGAALGATTAIAQPTSPLPFLINMQSDPLLPKATGKRVVICGGGWGGISA
CCCCHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCHHHH
AKHLKKLDPTLEVVVLERNPVFFSCPMSNKWLVDIVDVQFLTFSYLEVAQKYDYRFIQTE
HHHHHHCCCCEEEEEEECCCEEEECCCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEHH
VTAFERERKRVITAQGWLDYDYLIIGSGIRYNYEAWFGNDRKAAEYTRAMFPAAYIPNAE
HHHHHHHHHEEEEECCCCCEEEEEEECCCEEEEEEEECCCCHHHHHHHHHCCHHHCCCCH
HFRLKQSIQNFKGGDLVMTLPPPPHRCPPSPYERACLIAGLFKERKIKGRITILDPKPSP
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCEECCEEEEECCCCCC
APITGGFQEAFENLYKDQITYVPKAVIQEVDPYNKKIKTAVGDFRFDHSILMAPHQAGDM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCEEEECCCCCCCC
AWKAGVIGKNDEGKPTGWAGVDPFFLNMKDDPDVYVIGDSVGMVSPQFRFYPKAGHVANY
EEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCC
QGRIVAKYIAERVKGREPKYALPDNLCFMMVNTAPREDVAVRFKYYVNDKGIIIQDQDDD
CCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCC
NLRREEVVTEDFAWAGRMYEDMFG
CCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFNRRQFLAAGAALGATTAIAQPTSPLPFLINMQSDPLLPKATGKRVVICGGGWGGISA
CCCHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCHHHH
AKHLKKLDPTLEVVVLERNPVFFSCPMSNKWLVDIVDVQFLTFSYLEVAQKYDYRFIQTE
HHHHHHCCCCEEEEEEECCCEEEECCCCCCEEEEEECHHHHHHHHHHHHHHCCCEEEEHH
VTAFERERKRVITAQGWLDYDYLIIGSGIRYNYEAWFGNDRKAAEYTRAMFPAAYIPNAE
HHHHHHHHHEEEEECCCCCEEEEEEECCCEEEEEEEECCCCHHHHHHHHHCCHHHCCCCH
HFRLKQSIQNFKGGDLVMTLPPPPHRCPPSPYERACLIAGLFKERKIKGRITILDPKPSP
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCEECCEEEEECCCCCC
APITGGFQEAFENLYKDQITYVPKAVIQEVDPYNKKIKTAVGDFRFDHSILMAPHQAGDM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEECCEEEECCCCCCCC
AWKAGVIGKNDEGKPTGWAGVDPFFLNMKDDPDVYVIGDSVGMVSPQFRFYPKAGHVANY
EEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCC
QGRIVAKYIAERVKGREPKYALPDNLCFMMVNTAPREDVAVRFKYYVNDKGIIIQDQDDD
CCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCC
NLRREEVVTEDFAWAGRMYEDMFG
CCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8390993; 1649169; 7939681 [H]