Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

Click here to switch to the map view.

The map label for this gene is 71907427

Identifier: 71907427

GI number: 71907427

Start: 1934262

End: 1935083

Strand: Reverse

Name: 71907427

Synonym: Daro_1797

Alternate gene names: NA

Gene position: 1935083-1934262 (Counterclockwise)

Preceding gene: 71907429

Following gene: 71907426

Centisome position: 42.99

GC content: 60.22

Gene sequence:

>822_bases
ATGAAGAAGCCAAAACCACCTGCCGCCATCCCGGAAATTCGTCCCGGCCAGTCCCTCGAACTGCTCAAGGAACTGCACAT
CCTGACCCGCGATGGAAAGCTCAACCAGGACACGCGGCGCAAGCTCAAGCAGGTCTATCACCTCTATCAGTTCATCGAAC
CACTGCTGGACGGCGCCGAGACCTTGGTCGACCATGGGGCCGGCAAGTCCTACCTCGGTTTCATCCTCTACGATCTCTAT
TTCAAGGAGCGTGCCAGCGGCGAGATTGTCGGCATCGAAACCCGCGCCGAACTGGTCGAAAAATCGCGCGAACTGGCCGC
CCGGCTTGGCTTTCCGCGGATGCGCTTCATGGCCTGCACGGTCGAGGACTCGCTGTCGTCCAGCGAATTGCCAGACACCG
TCGATGTCGTCACCGCGCTACACGCCTGCAACACGGCCACCGACGACGCCATCCGTTTTGCCCTGACCCGCAACGCCCGC
CATATCGTCCTCGTCCCTTGCTGCCAGGCCGAAGTCGCCGCCACGATGCGGGCCAAAAAGAACGAATCGCTGAGCAAGAC
ACCGCTGTCGGAACTTTGGCGACACCCGATCCATACCCGCGAACTGGGCAGCCACCTGACCAACGTACTGCGCTGCCTGC
TGCTCGAGTCCCACGGTTACGACGTCACCGTCACCGAGTTGGTCGGCTGGGAGCATTCGATGAAAAATGAGCTGATCATC
GCCACCAAGCGCGGCAATCCTCGCAAGAATGCCCGCGAACGGGCCGAGGCCATCCTGCGTGAGTTCAATATCGAAGAACT
TACCCCTCGTTTTGCGTACTAA

Upstream 100 bases:

>100_bases
GTATGTTTGCGGTGTTTGATCACCATGAGCCTAATAACGACCCGACTTTGATTCGGTTGACACAATTTCAACAGAACTTT
GAATGCGATAATTGCGCCCC

Downstream 100 bases:

>100_bases
GGCGCCATGACTCGAATTCAACACCCTCTCGAACTCCTCGCGCCGGCCAAGAATGCCGATTTCGGCATTGAAGCCATCAA
GCACGGGGCCGATGCCGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: SAM-Dependent Methyltransferase; SAM Dependent Methyltransferase; Sam-Dependent Methyltransferase; Conserved Domain Protein; Sam Dependent Methyltransferase

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKKPKPPAAIPEIRPGQSLELLKELHILTRDGKLNQDTRRKLKQVYHLYQFIEPLLDGAETLVDHGAGKSYLGFILYDLY
FKERASGEIVGIETRAELVEKSRELAARLGFPRMRFMACTVEDSLSSSELPDTVDVVTALHACNTATDDAIRFALTRNAR
HIVLVPCCQAEVAATMRAKKNESLSKTPLSELWRHPIHTRELGSHLTNVLRCLLLESHGYDVTVTELVGWEHSMKNELII
ATKRGNPRKNARERAEAILREFNIEELTPRFAY

Sequences:

>Translated_273_residues
MKKPKPPAAIPEIRPGQSLELLKELHILTRDGKLNQDTRRKLKQVYHLYQFIEPLLDGAETLVDHGAGKSYLGFILYDLY
FKERASGEIVGIETRAELVEKSRELAARLGFPRMRFMACTVEDSLSSSELPDTVDVVTALHACNTATDDAIRFALTRNAR
HIVLVPCCQAEVAATMRAKKNESLSKTPLSELWRHPIHTRELGSHLTNVLRCLLLESHGYDVTVTELVGWEHSMKNELII
ATKRGNPRKNARERAEAILREFNIEELTPRFAY
>Mature_273_residues
MKKPKPPAAIPEIRPGQSLELLKELHILTRDGKLNQDTRRKLKQVYHLYQFIEPLLDGAETLVDHGAGKSYLGFILYDLY
FKERASGEIVGIETRAELVEKSRELAARLGFPRMRFMACTVEDSLSSSELPDTVDVVTALHACNTATDDAIRFALTRNAR
HIVLVPCCQAEVAATMRAKKNESLSKTPLSELWRHPIHTRELGSHLTNVLRCLLLESHGYDVTVTELVGWEHSMKNELII
ATKRGNPRKNARERAEAILREFNIEELTPRFAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30968; Mature: 30968

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPKPPAAIPEIRPGQSLELLKELHILTRDGKLNQDTRRKLKQVYHLYQFIEPLLDGAE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TLVDHGAGKSYLGFILYDLYFKERASGEIVGIETRAELVEKSRELAARLGFPRMRFMACT
HHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHEEEE
VEDSLSSSELPDTVDVVTALHACNTATDDAIRFALTRNARHIVLVPCCQAEVAATMRAKK
HHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHC
NESLSKTPLSELWRHPIHTRELGSHLTNVLRCLLLESHGYDVTVTELVGWEHSMKNELII
CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHCCCCEEE
ATKRGNPRKNARERAEAILREFNIEELTPRFAY
EECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCC
>Mature Secondary Structure
MKKPKPPAAIPEIRPGQSLELLKELHILTRDGKLNQDTRRKLKQVYHLYQFIEPLLDGAE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TLVDHGAGKSYLGFILYDLYFKERASGEIVGIETRAELVEKSRELAARLGFPRMRFMACT
HHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHEEEE
VEDSLSSSELPDTVDVVTALHACNTATDDAIRFALTRNARHIVLVPCCQAEVAATMRAKK
HHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHEECCCCEEEEEECCCHHHHHHHHHHC
NESLSKTPLSELWRHPIHTRELGSHLTNVLRCLLLESHGYDVTVTELVGWEHSMKNELII
CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHCCCCEEE
ATKRGNPRKNARERAEAILREFNIEELTPRFAY
EECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA