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The map label for this gene is cbiM [H]

Identifier: 71907327

GI number: 71907327

Start: 1824335

End: 1825012

Strand: Reverse

Name: cbiM [H]

Synonym: Daro_1697

Alternate gene names: 71907327

Gene position: 1825012-1824335 (Counterclockwise)

Preceding gene: 71907328

Following gene: 71907326

Centisome position: 40.55

GC content: 61.95

Gene sequence:

>678_bases
ATGCACATCATGGAAGGCTTTTTGCCCTTCGAGCACGCGGTCGGCTGGACGATCGCCGCGGTGCCATTCGTCGCCGGAGG
CCTGCTGGCCATCAAGAAGCGCATTCGGGACAAACCGGAACAGCGCATGCTGCTTGGCGTTGCCGCGGCCTTCGCCTTTG
TTCTCTCGGCGCTGAAACTGCCTTCCGTCACCGGCAGCTGTTCACACCCGACCGGCACCGGACTTGGCGCCCTACTCTTC
GGCCCGGTCGCCATGGCGCCTATCGGGGCGGTGGTGCTGCTTTTCCAGGCCTTGCTACTTGCCCACGGCGGCCTGACCAC
CCTCGGTGCCAACATTTTCTCGATGGCTGTCGTTGGTCCGTTTGCTGCCGCCGGCATTTTTCACCTGGCGCGCAGCCTGA
AGGCCTCGTTTGCCGTCAGCGTCTTTCTCGCGGCCAGTCTGGCCGACCTATCGACCTACGTGACGACCTCGCTGCAACTG
GCCTGGGCCTTCCCTGACCCGGCCGGTGGTTTTGTCACGTCATTCGCCAAGTTCGCCGGCATTTTCGCCGTCACACAAAT
TCCTCTGGCGATCAGCGAGGGGTTTCTGACTGTGCTGATTTTCAATGCCTTGGCCCGTTTCAACCCGCAGGAGCTGCAAG
AACTGAAGCTGCTTCCTGCCGATAAGGCCAGGGCATGA

Upstream 100 bases:

>100_bases
CCGTTCTTCGGGATGACTCCCGACCGCAGCCACTCTTCCGATCTTCAAGACTTTTCCACGGCCTGGTGCTGTTTGCCATT
TCTCGCTGTGGGAGAGAATC

Downstream 100 bases:

>100_bases
AGCGCTATCAGAACCGGTTGTTGCTGCTCGCCGTGGTACTGCTCGCCGTGGTGCCACTATGGCTGCACTCGACGCCGGCA
ACAGATGGCAGCGGCAAGCC

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MHIMEGFLPFEHAVGWTIAAVPFVAGGLLAIKKRIRDKPEQRMLLGVAAAFAFVLSALKLPSVTGSCSHPTGTGLGALLF
GPVAMAPIGAVVLLFQALLLAHGGLTTLGANIFSMAVVGPFAAAGIFHLARSLKASFAVSVFLAASLADLSTYVTTSLQL
AWAFPDPAGGFVTSFAKFAGIFAVTQIPLAISEGFLTVLIFNALARFNPQELQELKLLPADKARA

Sequences:

>Translated_225_residues
MHIMEGFLPFEHAVGWTIAAVPFVAGGLLAIKKRIRDKPEQRMLLGVAAAFAFVLSALKLPSVTGSCSHPTGTGLGALLF
GPVAMAPIGAVVLLFQALLLAHGGLTTLGANIFSMAVVGPFAAAGIFHLARSLKASFAVSVFLAASLADLSTYVTTSLQL
AWAFPDPAGGFVTSFAKFAGIFAVTQIPLAISEGFLTVLIFNALARFNPQELQELKLLPADKARA
>Mature_225_residues
MHIMEGFLPFEHAVGWTIAAVPFVAGGLLAIKKRIRDKPEQRMLLGVAAAFAFVLSALKLPSVTGSCSHPTGTGLGALLF
GPVAMAPIGAVVLLFQALLLAHGGLTTLGANIFSMAVVGPFAAAGIFHLARSLKASFAVSVFLAASLADLSTYVTTSLQL
AWAFPDPAGGFVTSFAKFAGIFAVTQIPLAISEGFLTVLIFNALARFNPQELQELKLLPADKARA

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 23436; Mature: 23436

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIMEGFLPFEHAVGWTIAAVPFVAGGLLAIKKRIRDKPEQRMLLGVAAAFAFVLSALKL
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
PSVTGSCSHPTGTGLGALLFGPVAMAPIGAVVLLFQALLLAHGGLTTLGANIFSMAVVGP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FAAAGIFHLARSLKASFAVSVFLAASLADLSTYVTTSLQLAWAFPDPAGGFVTSFAKFAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHH
IFAVTQIPLAISEGFLTVLIFNALARFNPQELQELKLLPADKARA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHIMEGFLPFEHAVGWTIAAVPFVAGGLLAIKKRIRDKPEQRMLLGVAAAFAFVLSALKL
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
PSVTGSCSHPTGTGLGALLFGPVAMAPIGAVVLLFQALLLAHGGLTTLGANIFSMAVVGP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FAAAGIFHLARSLKASFAVSVFLAASLADLSTYVTTSLQLAWAFPDPAGGFVTSFAKFAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHH
IFAVTQIPLAISEGFLTVLIFNALARFNPQELQELKLLPADKARA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609 [H]