| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907313
Identifier: 71907313
GI number: 71907313
Start: 1810940
End: 1811839
Strand: Reverse
Name: 71907313
Synonym: Daro_1683
Alternate gene names: NA
Gene position: 1811839-1810940 (Counterclockwise)
Preceding gene: 71907314
Following gene: 71907311
Centisome position: 40.25
GC content: 57.56
Gene sequence:
>900_bases TTGAATAATGCAGCCATGATGATTGCTGACGCCCATGACCCCAACGATCCGGACAAGAAAGGTGACGCCCTGAAGGCACA GCGCTTTCAGATGTTGGCCGACATCGCCAAGGAACTCTCTGGCGAAGTGGTGTTTCCGACTTATTTCGATGCCGTACTGC GCCTGCGTAAAGCCTTGCATGACCGCGACCAGAGTATCGCCAACATTGCCCATGCCGTTTCGGTCGAGCCGCTGATTTCA GCCAAGCTGCTCCAGCTGGCCAACTCGGTCGCCTTCAATCCGCAGGGAAATGAGGTGGTCGACCTGAAATCAGCCATCGT CCGCCTGGGACTCAATGCAGTGCGAACGGCTGCGCTCTCAATCGTGATGACCCAGTTGATGCGGGCAAAAGGCATGGCCG AGTTTTCAGAAATTACCCGCGGCCTCTGGGAACATTCCATCCAGACCTCCGCCGCGGCCAGGGTCATCGCCAGGCAGATG CCCCGCCTGAACGCTGACGAAGCCATGCTGGCCGGCCTGATTCACGATCTGGGCGCGTTCTACATGCTCTATCGGGCAAC CCAGTACCAGGAACTCCGCCATCGCCCGGAGAGCATCAAGTACCTGATCGTCAATTGGCATGAAAGCATCGGCGTTTCTT TACTTAACGCCCTGGGACTGCCGGCGGAAATCGTCGAAGCCACGGCGGACCACGATCATATGCGCTCGATCCCAACCGCC ATCAAAACCCTGTCGGAGGTCATCTACGTGGCCAACATGCTCTGTGGCGGGCATTTTGAATGGCTGATGCAGGATCAACC GGAAATACCGTCCGAACTCGCCGCGCTGGAAGAAGAATTCGGCCATCTGCGGCCTGAAATCGAGGCCTTGACGGCAGAAA TGCGCGACAGCTTCAGCTGA
Upstream 100 bases:
>100_bases ATTTTTAAGAGGCCGGGGCGATCTGCATGTTCGAGCGCCCCTCTGCGCCATCAAAACTCTGCACACAGCAAACGGCCTCT GCCCACAAGGCGGGGTTTTG
Downstream 100 bases:
>100_bases TTGCGCTTAGCTCTTGCGGCCGTGGCCGGTTTTTACCTGGGTTGAGGCCAGGATGCCACGCAGGATATTGATCTCGTCCT TTTCCAGCCTGACCCGGCCG
Product: HDIG
Products: NA
Alternate protein names: Metal Dependent Phosphohydrolase; HD Domain-Containing Protein; Histidine Kinase; Metal-Dependent Phosphohydrolase; Diguanylate Cyclase; Metal-Dependent Phosphoesterase; Metal Dependent Phosphohydrolase Superfamily Protein; Hdod Domain Family; HD Domain Protein; Metal-Dependent Hydrolase HDOD; Transcriptional Regulator Fis Family; HDOD Domain Family; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MNNAAMMIADAHDPNDPDKKGDALKAQRFQMLADIAKELSGEVVFPTYFDAVLRLRKALHDRDQSIANIAHAVSVEPLIS AKLLQLANSVAFNPQGNEVVDLKSAIVRLGLNAVRTAALSIVMTQLMRAKGMAEFSEITRGLWEHSIQTSAAARVIARQM PRLNADEAMLAGLIHDLGAFYMLYRATQYQELRHRPESIKYLIVNWHESIGVSLLNALGLPAEIVEATADHDHMRSIPTA IKTLSEVIYVANMLCGGHFEWLMQDQPEIPSELAALEEEFGHLRPEIEALTAEMRDSFS
Sequences:
>Translated_299_residues MNNAAMMIADAHDPNDPDKKGDALKAQRFQMLADIAKELSGEVVFPTYFDAVLRLRKALHDRDQSIANIAHAVSVEPLIS AKLLQLANSVAFNPQGNEVVDLKSAIVRLGLNAVRTAALSIVMTQLMRAKGMAEFSEITRGLWEHSIQTSAAARVIARQM PRLNADEAMLAGLIHDLGAFYMLYRATQYQELRHRPESIKYLIVNWHESIGVSLLNALGLPAEIVEATADHDHMRSIPTA IKTLSEVIYVANMLCGGHFEWLMQDQPEIPSELAALEEEFGHLRPEIEALTAEMRDSFS >Mature_299_residues MNNAAMMIADAHDPNDPDKKGDALKAQRFQMLADIAKELSGEVVFPTYFDAVLRLRKALHDRDQSIANIAHAVSVEPLIS AKLLQLANSVAFNPQGNEVVDLKSAIVRLGLNAVRTAALSIVMTQLMRAKGMAEFSEITRGLWEHSIQTSAAARVIARQM PRLNADEAMLAGLIHDLGAFYMLYRATQYQELRHRPESIKYLIVNWHESIGVSLLNALGLPAEIVEATADHDHMRSIPTA IKTLSEVIYVANMLCGGHFEWLMQDQPEIPSELAALEEEFGHLRPEIEALTAEMRDSFS
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33180; Mature: 33180
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNAAMMIADAHDPNDPDKKGDALKAQRFQMLADIAKELSGEVVFPTYFDAVLRLRKALH CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHH DRDQSIANIAHAVSVEPLISAKLLQLANSVAFNPQGNEVVDLKSAIVRLGLNAVRTAALS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IVMTQLMRAKGMAEFSEITRGLWEHSIQTSAAARVIARQMPRLNADEAMLAGLIHDLGAF HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH YMLYRATQYQELRHRPESIKYLIVNWHESIGVSLLNALGLPAEIVEATADHDHMRSIPTA HHHHHHHHHHHHHCCCCHHEEEEEECHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHH IKTLSEVIYVANMLCGGHFEWLMQDQPEIPSELAALEEEFGHLRPEIEALTAEMRDSFS HHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNNAAMMIADAHDPNDPDKKGDALKAQRFQMLADIAKELSGEVVFPTYFDAVLRLRKALH CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHH DRDQSIANIAHAVSVEPLISAKLLQLANSVAFNPQGNEVVDLKSAIVRLGLNAVRTAALS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IVMTQLMRAKGMAEFSEITRGLWEHSIQTSAAARVIARQMPRLNADEAMLAGLIHDLGAF HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH YMLYRATQYQELRHRPESIKYLIVNWHESIGVSLLNALGLPAEIVEATADHDHMRSIPTA HHHHHHHHHHHHHCCCCHHEEEEEECHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHH IKTLSEVIYVANMLCGGHFEWLMQDQPEIPSELAALEEEFGHLRPEIEALTAEMRDSFS HHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA