| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907273
Identifier: 71907273
GI number: 71907273
Start: 1765437
End: 1766483
Strand: Reverse
Name: 71907273
Synonym: Daro_1642
Alternate gene names: NA
Gene position: 1766483-1765437 (Counterclockwise)
Preceding gene: 71907274
Following gene: 71907272
Centisome position: 39.25
GC content: 53.1
Gene sequence:
>1047_bases ATGAACACACCTTACAACCCGTACGCGATTAATGAACTTGACATCGCCAAAACCGTTTGCGACAGCTTCACTTACTTGGT CAAAAACAACTCCGGACTACTCGAATGGCATTGCAGCCAACACGCTCCGTTTCTAAATCAAGTCCTCGGTCTTCTGGAAG ATGAAAAGCTGGCAAAACGCCTCACGCCATCTGATGACCTGGGGTTTGTCTTCGAGCGTGGGCTGGCTGGGACGAAGTTA CGCAAAGTAACGCAAACCGGACACGCCTTCGCGAGTTGGATTCGCCTGCCAACGTTGACTCAGCCCCCACCCGGATACCA GCAAGGCGAGATTCTCAACCTGATACGCCAGCAGGCCAAGCTACATCTGGGGAAAATAACTTTTTCGGGCAATCCGCTCG CAATGGTCAATCCGACTGGTACGCTCGAAGGCGAGTTGGTCAACACCTTCCTCGTACGTACCCGCGAAGCACTACTGCGC CCTTCAACGCGCAAGCTCCATGAAGCGAGCAAGGATCAACTCCGCAACGACACGAGGAAAGTGCTACGTTCCATTGACCG TTGCCAGACAGTCATCCAATTCCCCGGCATCGCCGAGCTTCGCTTGCACTACTTCGGTCGAGAGAAGCACTTTACGCAGG AAGAAAGCACTGCGCACATCGATCTGTTTGCCGAGCGACTGATGACCAGTCAATCCGGTATCGCGCCACCAATTTGGCTT CACTGGAAGCCTCTTTACACGGAAGAACAGGGCTACGGATACCACCTTCTGGTGGTTTACGACATGCAACATGTAAACGT CCATTCCGCACTGTACGGGTTGGTAGGGCTGTGGCATGAGCTCACCGATCAATATGGCGTGGCGATGGTGACAAACCATT TGGGCAGTGATTTTCGGTTGTTGAAACGCCTCGTAAGCCTGCTTTTCCGGTGCGATGCGCTGCTCCGACTCAAAGGCCAG CCCAATAAACCGAATTTCGGCATTTGCTTCAATTCGCGCGTCAACACAATGCAACTGCCAATTGTCTCGGAGGTTACCCC ATGCTGA
Upstream 100 bases:
>100_bases CGACGAAATATTCCAATGGCTCGCTGAACTCCGATAGTCCGCCCACATGCCCATCTGCTCTGAACAGAGCACCACCAGAA AAAATGACAAGGAAATAATG
Downstream 100 bases:
>100_bases TCCGCCCTCGAATTATCGATAGTGAAGCCTCATTCCGCCGGAAGGCGTATTACTTTGCAAGTCCGGACTTGCTCGATTCG GCTGCGGCCTCGGCACTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MNTPYNPYAINELDIAKTVCDSFTYLVKNNSGLLEWHCSQHAPFLNQVLGLLEDEKLAKRLTPSDDLGFVFERGLAGTKL RKVTQTGHAFASWIRLPTLTQPPPGYQQGEILNLIRQQAKLHLGKITFSGNPLAMVNPTGTLEGELVNTFLVRTREALLR PSTRKLHEASKDQLRNDTRKVLRSIDRCQTVIQFPGIAELRLHYFGREKHFTQEESTAHIDLFAERLMTSQSGIAPPIWL HWKPLYTEEQGYGYHLLVVYDMQHVNVHSALYGLVGLWHELTDQYGVAMVTNHLGSDFRLLKRLVSLLFRCDALLRLKGQ PNKPNFGICFNSRVNTMQLPIVSEVTPC
Sequences:
>Translated_348_residues MNTPYNPYAINELDIAKTVCDSFTYLVKNNSGLLEWHCSQHAPFLNQVLGLLEDEKLAKRLTPSDDLGFVFERGLAGTKL RKVTQTGHAFASWIRLPTLTQPPPGYQQGEILNLIRQQAKLHLGKITFSGNPLAMVNPTGTLEGELVNTFLVRTREALLR PSTRKLHEASKDQLRNDTRKVLRSIDRCQTVIQFPGIAELRLHYFGREKHFTQEESTAHIDLFAERLMTSQSGIAPPIWL HWKPLYTEEQGYGYHLLVVYDMQHVNVHSALYGLVGLWHELTDQYGVAMVTNHLGSDFRLLKRLVSLLFRCDALLRLKGQ PNKPNFGICFNSRVNTMQLPIVSEVTPC >Mature_348_residues MNTPYNPYAINELDIAKTVCDSFTYLVKNNSGLLEWHCSQHAPFLNQVLGLLEDEKLAKRLTPSDDLGFVFERGLAGTKL RKVTQTGHAFASWIRLPTLTQPPPGYQQGEILNLIRQQAKLHLGKITFSGNPLAMVNPTGTLEGELVNTFLVRTREALLR PSTRKLHEASKDQLRNDTRKVLRSIDRCQTVIQFPGIAELRLHYFGREKHFTQEESTAHIDLFAERLMTSQSGIAPPIWL HWKPLYTEEQGYGYHLLVVYDMQHVNVHSALYGLVGLWHELTDQYGVAMVTNHLGSDFRLLKRLVSLLFRCDALLRLKGQ PNKPNFGICFNSRVNTMQLPIVSEVTPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39573; Mature: 39573
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPYNPYAINELDIAKTVCDSFTYLVKNNSGLLEWHCSQHAPFLNQVLGLLEDEKLAKR CCCCCCCEECCHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCHHHHHHHHHCHHHHHHH LTPSDDLGFVFERGLAGTKLRKVTQTGHAFASWIRLPTLTQPPPGYQQGEILNLIRQQAK CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH LHLGKITFSGNPLAMVNPTGTLEGELVNTFLVRTREALLRPSTRKLHEASKDQLRNDTRK HEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VLRSIDRCQTVIQFPGIAELRLHYFGREKHFTQEESTAHIDLFAERLMTSQSGIAPPIWL HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEE HWKPLYTEEQGYGYHLLVVYDMQHVNVHSALYGLVGLWHELTDQYGVAMVTNHLGSDFRL EEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHH LKRLVSLLFRCDALLRLKGQPNKPNFGICFNSRVNTMQLPIVSEVTPC HHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCEEECCCHHCCCCC >Mature Secondary Structure MNTPYNPYAINELDIAKTVCDSFTYLVKNNSGLLEWHCSQHAPFLNQVLGLLEDEKLAKR CCCCCCCEECCHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCHHHHHHHHHCHHHHHHH LTPSDDLGFVFERGLAGTKLRKVTQTGHAFASWIRLPTLTQPPPGYQQGEILNLIRQQAK CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH LHLGKITFSGNPLAMVNPTGTLEGELVNTFLVRTREALLRPSTRKLHEASKDQLRNDTRK HEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VLRSIDRCQTVIQFPGIAELRLHYFGREKHFTQEESTAHIDLFAERLMTSQSGIAPPIWL HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEE HWKPLYTEEQGYGYHLLVVYDMQHVNVHSALYGLVGLWHELTDQYGVAMVTNHLGSDFRL EEEECCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHH LKRLVSLLFRCDALLRLKGQPNKPNFGICFNSRVNTMQLPIVSEVTPC HHHHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCEEECCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA