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The map label for this gene is yqhA [C]

Identifier: 71907259

GI number: 71907259

Start: 1748275

End: 1748814

Strand: Reverse

Name: yqhA [C]

Synonym: Daro_1628

Alternate gene names: 71907259

Gene position: 1748814-1748275 (Counterclockwise)

Preceding gene: 71907271

Following gene: 71907258

Centisome position: 38.85

GC content: 56.11

Gene sequence:

>540_bases
ATGATGCGCTCGCCAGTCAAACATCTCGAATCGTTCATCTTCGCCAGTCGCTGGATCCAGGCCCCGCTCTACCTCGGCCT
GATCGTCGCCCAGGTTGTCTATTGCTGGCTGTTCATGGTCGAACTGAGCCATCTGGTTCATAGCGCCTTCGATGCAGCTC
ACCTCAGCGAAACTGACGTGATGCTTGTCGTCCTTGGCCTGATCGACGTCGTGATGATCGCCAATCTGCTGGTCATGGTT
ATCGTCGGTGGTTACGAGACATTCGTTTCCCGCCTCGACCTCGATGACCATCCGGATCAGCCGGAATGGCTTTCCCACGT
CAATGCCGGCGTGCTCAAGATCAAGCTGTCGACGGCCATCATCGGCATCTCGTCAATCCACCTGCTGAAGAGCTTCATCA
ATGCCGCCAACCTGTCCGAGCACACGCTGATGTGGCAGGTCATCATTCACGTTGTATTCCTTTTCTCCGCCCTGGCCATG
GCGCTTGTCGACAAGACCATGACCCAGACCCTCGCCCTTCAACACCAGAAATCCCACTGA

Upstream 100 bases:

>100_bases
GCGGCGCAGCAATTCAGTAACATTTCATGCCAATGACCACCTACCCGCGACGCGGCAACTTGGCGTGGTAAACTCTCTGC
CCCCCAAACACCACACACAG

Downstream 100 bases:

>100_bases
CCCGGAGTTGTGCATGACCGCCATCAAACAGGAAGACCTGATCCAGTCCGTCGCCGATGCCTTCCAGTACATCAGCTACT
ATCACCCGCTCGATTACATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MMRSPVKHLESFIFASRWIQAPLYLGLIVAQVVYCWLFMVELSHLVHSAFDAAHLSETDVMLVVLGLIDVVMIANLLVMV
IVGGYETFVSRLDLDDHPDQPEWLSHVNAGVLKIKLSTAIIGISSIHLLKSFINAANLSEHTLMWQVIIHVVFLFSALAM
ALVDKTMTQTLALQHQKSH

Sequences:

>Translated_179_residues
MMRSPVKHLESFIFASRWIQAPLYLGLIVAQVVYCWLFMVELSHLVHSAFDAAHLSETDVMLVVLGLIDVVMIANLLVMV
IVGGYETFVSRLDLDDHPDQPEWLSHVNAGVLKIKLSTAIIGISSIHLLKSFINAANLSEHTLMWQVIIHVVFLFSALAM
ALVDKTMTQTLALQHQKSH
>Mature_179_residues
MMRSPVKHLESFIFASRWIQAPLYLGLIVAQVVYCWLFMVELSHLVHSAFDAAHLSETDVMLVVLGLIDVVMIANLLVMV
IVGGYETFVSRLDLDDHPDQPEWLSHVNAGVLKIKLSTAIIGISSIHLLKSFINAANLSEHTLMWQVIIHVVFLFSALAM
ALVDKTMTQTLALQHQKSH

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0114 family [H]

Homologues:

Organism=Escherichia coli, GI1789376, Length=159, Percent_Identity=42.1383647798742, Blast_Score=130, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005134
- InterPro:   IPR020761
- InterPro:   IPR020765 [H]

Pfam domain/function: PF03350 UPF0114 [H]

EC number: NA

Molecular weight: Translated: 20041; Mature: 20041

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRSPVKHLESFIFASRWIQAPLYLGLIVAQVVYCWLFMVELSHLVHSAFDAAHLSETDV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
MLVVLGLIDVVMIANLLVMVIVGGYETFVSRLDLDDHPDQPEWLSHVNAGVLKIKLSTAI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEHHHHH
IGISSIHLLKSFINAANLSEHTLMWQVIIHVVFLFSALAMALVDKTMTQTLALQHQKSH
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMRSPVKHLESFIFASRWIQAPLYLGLIVAQVVYCWLFMVELSHLVHSAFDAAHLSETDV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
MLVVLGLIDVVMIANLLVMVIVGGYETFVSRLDLDDHPDQPEWLSHVNAGVLKIKLSTAI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEHHHHH
IGISSIHLLKSFINAANLSEHTLMWQVIIHVVFLFSALAMALVDKTMTQTLALQHQKSH
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]