Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

Click here to switch to the map view.

The map label for this gene is 71907195

Identifier: 71907195

GI number: 71907195

Start: 1676366

End: 1676854

Strand: Reverse

Name: 71907195

Synonym: Daro_1563

Alternate gene names: NA

Gene position: 1676854-1676366 (Counterclockwise)

Preceding gene: 71907196

Following gene: 71907194

Centisome position: 37.25

GC content: 57.87

Gene sequence:

>489_bases
ATGTGTGACAAGCATCGTCGCCAGCTTATCGGCCGCCTCGGCATTGGCGGCCTGCTACTGACGCCGCTCGCCGCCATCCT
ATCCGGCTGCAAAAAAGATAACTGGCCGGATGGTATGGCAGAGATAAAGTGGGATCGGGATACCTGCACCCGTTGCAGCA
TGGTCATTTCCGACCGCCGTTTTGCTTGCCAGGTTCGTGGCGGACCGGACAATGCAGTTTTCAAGTTCGACGACCCCGGC
TGCCTCGCCTTCTGGCTGAAGGAGAAGGCCGAAAAATACCCATGGCTGGCTGATGCCGCCACCAAAATCTGGATCGCCGA
CTTCGACAGCAAGAGCCGTGAAGAGATGCACTGGCTTGATCCCAAGCGAGCTTATTTCATCGGCAAAACCTCCCCGATGG
GCTACAACTTCGCTGCCGTATCGATGCCGATGCCTGGCAGCCTCGATTTCACCGACATGCGCCAGCACGTGCTGGCCAAG
GGCAAGTAA

Upstream 100 bases:

>100_bases
GGGAAGGTGAAATTGCCGGGCCAGACCGCCTGCGTTTTCTCGGCATCATTTCCCGTTACACCGCTTTGGTCAGCGACCTT
TCGCTTTCCGAGAACTGAGC

Downstream 100 bases:

>100_bases
ATGAAACAACTGTGGCTCACTGCCAAACTCGATATCGTCGAATCCCTGCGTGCTCGCTGGTTCCAGATCTATACCCTGGT
CTTCGGCGGCATCGTCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MCDKHRRQLIGRLGIGGLLLTPLAAILSGCKKDNWPDGMAEIKWDRDTCTRCSMVISDRRFACQVRGGPDNAVFKFDDPG
CLAFWLKEKAEKYPWLADAATKIWIADFDSKSREEMHWLDPKRAYFIGKTSPMGYNFAAVSMPMPGSLDFTDMRQHVLAK
GK

Sequences:

>Translated_162_residues
MCDKHRRQLIGRLGIGGLLLTPLAAILSGCKKDNWPDGMAEIKWDRDTCTRCSMVISDRRFACQVRGGPDNAVFKFDDPG
CLAFWLKEKAEKYPWLADAATKIWIADFDSKSREEMHWLDPKRAYFIGKTSPMGYNFAAVSMPMPGSLDFTDMRQHVLAK
GK
>Mature_162_residues
MCDKHRRQLIGRLGIGGLLLTPLAAILSGCKKDNWPDGMAEIKWDRDTCTRCSMVISDRRFACQVRGGPDNAVFKFDDPG
CLAFWLKEKAEKYPWLADAATKIWIADFDSKSREEMHWLDPKRAYFIGKTSPMGYNFAAVSMPMPGSLDFTDMRQHVLAK
GK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18350; Mature: 18350

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCDKHRRQLIGRLGIGGLLLTPLAAILSGCKKDNWPDGMAEIKWDRDTCTRCSMVISDRR
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHCCCE
FACQVRGGPDNAVFKFDDPGCLAFWLKEKAEKYPWLADAATKIWIADFDSKSREEMHWLD
EEEEECCCCCCCEEEECCCCEEHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHCCC
PKRAYFIGKTSPMGYNFAAVSMPMPGSLDFTDMRQHVLAKGK
CCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MCDKHRRQLIGRLGIGGLLLTPLAAILSGCKKDNWPDGMAEIKWDRDTCTRCSMVISDRR
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHCCCE
FACQVRGGPDNAVFKFDDPGCLAFWLKEKAEKYPWLADAATKIWIADFDSKSREEMHWLD
EEEEECCCCCCCEEEECCCCEEHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHCCC
PKRAYFIGKTSPMGYNFAAVSMPMPGSLDFTDMRQHVLAKGK
CCCEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA