Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71907155

Identifier: 71907155

GI number: 71907155

Start: 1631996

End: 1632613

Strand: Reverse

Name: 71907155

Synonym: Daro_1523

Alternate gene names: NA

Gene position: 1632613-1631996 (Counterclockwise)

Preceding gene: 71907156

Following gene: 71907154

Centisome position: 36.27

GC content: 58.25

Gene sequence:

>618_bases
ATGACCGAAGGACGCAGAATCGCCAGTGATGTCGCCTTCACGCCCGGCGTCAAGGCCATCCAATCCCGCAAGGGGTCGCG
TGACGCCTATGCCCGAATGGAAAGCCAGGGAGGCTTGGCAACGGCGATTACCGAAGAACTTGCCGCGTTCATTGCAGGGC
AGACAAGTGTTTTTCTCGCCACGGCCAACGCCCAAGGCCAGCCCTACATCCAGCATCGCGGCGGACCAGCGGGCTTCTTG
CATGTCCTTGATGAGCACACGATCGGCTTCGCCGACTTCAACGGCAACCGGCAGTACATCAGCATCGGCAATCTAGCCGA
GAATCCCAGAGCACATTTGTTTCTGATCGACTACACGACGCGGCAACGCATCAAACTGTGGGGAACCGCTCACGTGGTTG
AGGGCGACAAGGAGCTGATCGCGAGCCTGATGCCGGCCAACTACCGGGCAAAAAGCGAGCAGGCCATGCTCTTTAGCGTG
GAAGCCTGGGATGCCAATTGCCCGCAACACATACCGCAACGACTGGAAGCCAGCGACGTGGCCAAGGCGCTACAAAGCCG
GGATCAGAAGATTGCTGAACTCGAAGCAGAAATCCGGCGACTGAAAGCCATTCAATAA

Upstream 100 bases:

>100_bases
ACCCTGACTAACTATGTCAATAACGTAGCTCAGACCGATATCGACTTCCCGGTAGTCAAACCTTTCAAATAGCCGATTCA
GCTTTGAGGAGCGGATAGTC

Downstream 100 bases:

>100_bases
GGAAGTCATGATGGAAACCAAACCACCCTTGCCGCCATTTACCGCTGAAACCGCCACCCAGAAGGTACGACTGGCGGAAG
ATGCCTGGAACAGCCGCGAC

Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Products: NA

Alternate protein names: Pyridoxamine 5-Phosphate Oxidase; Pyridoxine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxine 5`-Phosphate Oxidase Protein; Pyridoxine 5`-Phosphate Oxidase; Hydrolase

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTEGRRIASDVAFTPGVKAIQSRKGSRDAYARMESQGGLATAITEELAAFIAGQTSVFLATANAQGQPYIQHRGGPAGFL
HVLDEHTIGFADFNGNRQYISIGNLAENPRAHLFLIDYTTRQRIKLWGTAHVVEGDKELIASLMPANYRAKSEQAMLFSV
EAWDANCPQHIPQRLEASDVAKALQSRDQKIAELEAEIRRLKAIQ

Sequences:

>Translated_205_residues
MTEGRRIASDVAFTPGVKAIQSRKGSRDAYARMESQGGLATAITEELAAFIAGQTSVFLATANAQGQPYIQHRGGPAGFL
HVLDEHTIGFADFNGNRQYISIGNLAENPRAHLFLIDYTTRQRIKLWGTAHVVEGDKELIASLMPANYRAKSEQAMLFSV
EAWDANCPQHIPQRLEASDVAKALQSRDQKIAELEAEIRRLKAIQ
>Mature_204_residues
TEGRRIASDVAFTPGVKAIQSRKGSRDAYARMESQGGLATAITEELAAFIAGQTSVFLATANAQGQPYIQHRGGPAGFLH
VLDEHTIGFADFNGNRQYISIGNLAENPRAHLFLIDYTTRQRIKLWGTAHVVEGDKELIASLMPANYRAKSEQAMLFSVE
AWDANCPQHIPQRLEASDVAKALQSRDQKIAELEAEIRRLKAIQ

Specific function: Unknown

COG id: COG3576

COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22577; Mature: 22446

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEGRRIASDVAFTPGVKAIQSRKGSRDAYARMESQGGLATAITEELAAFIAGQTSVFLA
CCCCCHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEE
TANAQGQPYIQHRGGPAGFLHVLDEHTIGFADFNGNRQYISIGNLAENPRAHLFLIDYTT
ECCCCCCCEEEECCCCHHHHHHHHCCEEEEEEECCCEEEEEECCCCCCCCEEEEEEEECC
RQRIKLWGTAHVVEGDKELIASLMPANYRAKSEQAMLFSVEAWDANCPQHIPQRLEASDV
CCEEEEEEEEEEECCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCHHHH
AKALQSRDQKIAELEAEIRRLKAIQ
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TEGRRIASDVAFTPGVKAIQSRKGSRDAYARMESQGGLATAITEELAAFIAGQTSVFLA
CCCCHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEE
TANAQGQPYIQHRGGPAGFLHVLDEHTIGFADFNGNRQYISIGNLAENPRAHLFLIDYTT
ECCCCCCCEEEECCCCHHHHHHHHCCEEEEEEECCCEEEEEECCCCCCCCEEEEEEEECC
RQRIKLWGTAHVVEGDKELIASLMPANYRAKSEQAMLFSVEAWDANCPQHIPQRLEASDV
CCEEEEEEEEEEECCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCHHHH
AKALQSRDQKIAELEAEIRRLKAIQ
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA