| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907155
Identifier: 71907155
GI number: 71907155
Start: 1631996
End: 1632613
Strand: Reverse
Name: 71907155
Synonym: Daro_1523
Alternate gene names: NA
Gene position: 1632613-1631996 (Counterclockwise)
Preceding gene: 71907156
Following gene: 71907154
Centisome position: 36.27
GC content: 58.25
Gene sequence:
>618_bases ATGACCGAAGGACGCAGAATCGCCAGTGATGTCGCCTTCACGCCCGGCGTCAAGGCCATCCAATCCCGCAAGGGGTCGCG TGACGCCTATGCCCGAATGGAAAGCCAGGGAGGCTTGGCAACGGCGATTACCGAAGAACTTGCCGCGTTCATTGCAGGGC AGACAAGTGTTTTTCTCGCCACGGCCAACGCCCAAGGCCAGCCCTACATCCAGCATCGCGGCGGACCAGCGGGCTTCTTG CATGTCCTTGATGAGCACACGATCGGCTTCGCCGACTTCAACGGCAACCGGCAGTACATCAGCATCGGCAATCTAGCCGA GAATCCCAGAGCACATTTGTTTCTGATCGACTACACGACGCGGCAACGCATCAAACTGTGGGGAACCGCTCACGTGGTTG AGGGCGACAAGGAGCTGATCGCGAGCCTGATGCCGGCCAACTACCGGGCAAAAAGCGAGCAGGCCATGCTCTTTAGCGTG GAAGCCTGGGATGCCAATTGCCCGCAACACATACCGCAACGACTGGAAGCCAGCGACGTGGCCAAGGCGCTACAAAGCCG GGATCAGAAGATTGCTGAACTCGAAGCAGAAATCCGGCGACTGAAAGCCATTCAATAA
Upstream 100 bases:
>100_bases ACCCTGACTAACTATGTCAATAACGTAGCTCAGACCGATATCGACTTCCCGGTAGTCAAACCTTTCAAATAGCCGATTCA GCTTTGAGGAGCGGATAGTC
Downstream 100 bases:
>100_bases GGAAGTCATGATGGAAACCAAACCACCCTTGCCGCCATTTACCGCTGAAACCGCCACCCAGAAGGTACGACTGGCGGAAG ATGCCTGGAACAGCCGCGAC
Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding
Products: NA
Alternate protein names: Pyridoxamine 5-Phosphate Oxidase; Pyridoxine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxine 5`-Phosphate Oxidase Protein; Pyridoxine 5`-Phosphate Oxidase; Hydrolase
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTEGRRIASDVAFTPGVKAIQSRKGSRDAYARMESQGGLATAITEELAAFIAGQTSVFLATANAQGQPYIQHRGGPAGFL HVLDEHTIGFADFNGNRQYISIGNLAENPRAHLFLIDYTTRQRIKLWGTAHVVEGDKELIASLMPANYRAKSEQAMLFSV EAWDANCPQHIPQRLEASDVAKALQSRDQKIAELEAEIRRLKAIQ
Sequences:
>Translated_205_residues MTEGRRIASDVAFTPGVKAIQSRKGSRDAYARMESQGGLATAITEELAAFIAGQTSVFLATANAQGQPYIQHRGGPAGFL HVLDEHTIGFADFNGNRQYISIGNLAENPRAHLFLIDYTTRQRIKLWGTAHVVEGDKELIASLMPANYRAKSEQAMLFSV EAWDANCPQHIPQRLEASDVAKALQSRDQKIAELEAEIRRLKAIQ >Mature_204_residues TEGRRIASDVAFTPGVKAIQSRKGSRDAYARMESQGGLATAITEELAAFIAGQTSVFLATANAQGQPYIQHRGGPAGFLH VLDEHTIGFADFNGNRQYISIGNLAENPRAHLFLIDYTTRQRIKLWGTAHVVEGDKELIASLMPANYRAKSEQAMLFSVE AWDANCPQHIPQRLEASDVAKALQSRDQKIAELEAEIRRLKAIQ
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22577; Mature: 22446
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEGRRIASDVAFTPGVKAIQSRKGSRDAYARMESQGGLATAITEELAAFIAGQTSVFLA CCCCCHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEE TANAQGQPYIQHRGGPAGFLHVLDEHTIGFADFNGNRQYISIGNLAENPRAHLFLIDYTT ECCCCCCCEEEECCCCHHHHHHHHCCEEEEEEECCCEEEEEECCCCCCCCEEEEEEEECC RQRIKLWGTAHVVEGDKELIASLMPANYRAKSEQAMLFSVEAWDANCPQHIPQRLEASDV CCEEEEEEEEEEECCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCHHHH AKALQSRDQKIAELEAEIRRLKAIQ HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TEGRRIASDVAFTPGVKAIQSRKGSRDAYARMESQGGLATAITEELAAFIAGQTSVFLA CCCCHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEE TANAQGQPYIQHRGGPAGFLHVLDEHTIGFADFNGNRQYISIGNLAENPRAHLFLIDYTT ECCCCCCCEEEECCCCHHHHHHHHCCEEEEEEECCCEEEEEECCCCCCCCEEEEEEEECC RQRIKLWGTAHVVEGDKELIASLMPANYRAKSEQAMLFSVEAWDANCPQHIPQRLEASDV CCEEEEEEEEEEECCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCHHHH AKALQSRDQKIAELEAEIRRLKAIQ HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA