Click here to switch to the map view.

The map label for this gene is yedY [H]

Identifier: 71907150

GI number: 71907150

Start: 1628757

End: 1629548

Strand: Reverse

Name: yedY [H]

Synonym: Daro_1518

Alternate gene names: 71907150

Gene position: 1629548-1628757 (Counterclockwise)

Preceding gene: 71907151

Following gene: 71907149

Centisome position: 36.2

GC content: 56.06

Gene sequence:

>792_bases
ATGATGATCAAAAAACCTGCACAACTGTTCTCCACCAACGGTGAAGCCCTGATCAAGAATGCCTTGAAGGATCTCGGACG
CCACATCGAGCAACCGACGCGCCGAGCCTTTCTGCAACGCTCCTTGAGCCTGGGTGGTTTATCTCTGCTCAGCGGGTGTG
CGGTGGTTGATGAAGAAAGCGTCGAGAAAGCGTTGATGAAAGTTTCACGCTTCAACGACAAGGCGCAGGCATGGCTATTC
GATCCCAACCGATTAGCGCCGACCTATCCCGAATCGATGATTACTCGCCCCTTTCCATTCAATGCCTACTACGGCGAAGA
CGAGATTCGGGAAGTAGCCGAAGAATCCTATCGTCTGGAGGTTTCAGGGATGGTGGCCGACAAACGCACCTGGACACTCG
CCGAGTTGCGTGCCATGCCGCAGATGGCTCAGGTCACCCGCCATATTTGCGTCGAGGGCTGGAGTGCGATCGGAAAATGG
GGGGGCGTCCCATTTGCCAGCTTCCTGCGCCGGGTCGGCGCCGACACGACCGCGAAATATGTCGGATTCAAATGTGCTGA
CGATTACTACACCAGCGTTGACATGCCGACGGCGCTACATCCTCAGACGCTGCTGACGCTGACCTACGACGATCAGCCAT
TGCCGCCACGTTATGGCTTCCCGATGAAACTGCGCATGCCGACCAAGCTCGGCTACAAGAACCCAAAACACATCCAAGCC
ATTTTTGTCACCAACACCTACCCCGGGGGCTACTGGGAAGACCAGGGGTACAACTGGTTCGGTGGCAGTTGA

Upstream 100 bases:

>100_bases
GATGGGCGGAATGGTAGCTTTCGCCGGGATTCATCTGATCATGGTGGCGCTGGTGCCACGCACGCTGCTCGCCATGCTTC
GCGGTCGATAGAGGAAAACG

Downstream 100 bases:

>100_bases
GCAATCGCGCCCAACAGCCCTGAATACCCGGCGATTTCGCCACTTGCTTACTAACCACAACGGAGTTCACCATGAAAAAG
ATTACTTCTACCATTTTCGC

Product: oxidoreductase, molybdopterin binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MMIKKPAQLFSTNGEALIKNALKDLGRHIEQPTRRAFLQRSLSLGGLSLLSGCAVVDEESVEKALMKVSRFNDKAQAWLF
DPNRLAPTYPESMITRPFPFNAYYGEDEIREVAEESYRLEVSGMVADKRTWTLAELRAMPQMAQVTRHICVEGWSAIGKW
GGVPFASFLRRVGADTTAKYVGFKCADDYYTSVDMPTALHPQTLLTLTYDDQPLPPRYGFPMKLRMPTKLGYKNPKHIQA
IFVTNTYPGGYWEDQGYNWFGGS

Sequences:

>Translated_263_residues
MMIKKPAQLFSTNGEALIKNALKDLGRHIEQPTRRAFLQRSLSLGGLSLLSGCAVVDEESVEKALMKVSRFNDKAQAWLF
DPNRLAPTYPESMITRPFPFNAYYGEDEIREVAEESYRLEVSGMVADKRTWTLAELRAMPQMAQVTRHICVEGWSAIGKW
GGVPFASFLRRVGADTTAKYVGFKCADDYYTSVDMPTALHPQTLLTLTYDDQPLPPRYGFPMKLRMPTKLGYKNPKHIQA
IFVTNTYPGGYWEDQGYNWFGGS
>Mature_263_residues
MMIKKPAQLFSTNGEALIKNALKDLGRHIEQPTRRAFLQRSLSLGGLSLLSGCAVVDEESVEKALMKVSRFNDKAQAWLF
DPNRLAPTYPESMITRPFPFNAYYGEDEIREVAEESYRLEVSGMVADKRTWTLAELRAMPQMAQVTRHICVEGWSAIGKW
GGVPFASFLRRVGADTTAKYVGFKCADDYYTSVDMPTALHPQTLLTLTYDDQPLPPRYGFPMKLRMPTKLGYKNPKHIQA
IFVTNTYPGGYWEDQGYNWFGGS

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=159, Percent_Identity=29.559748427673, Blast_Score=68, Evalue=6e-13,
Organism=Drosophila melanogaster, GI18859905, Length=273, Percent_Identity=27.1062271062271, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 29754; Mature: 29754

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIKKPAQLFSTNGEALIKNALKDLGRHIEQPTRRAFLQRSLSLGGLSLLSGCAVVDEES
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHCCHHCCHHH
VEKALMKVSRFNDKAQAWLFDPNRLAPTYPESMITRPFPFNAYYGEDEIREVAEESYRLE
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHEEE
VSGMVADKRTWTLAELRAMPQMAQVTRHICVEGWSAIGKWGGVPFASFLRRVGADTTAKY
EEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHH
VGFKCADDYYTSVDMPTALHPQTLLTLTYDDQPLPPRYGFPMKLRMPTKLGYKNPKHIQA
HCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCHHCCCCCCCEEEE
IFVTNTYPGGYWEDQGYNWFGGS
EEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMIKKPAQLFSTNGEALIKNALKDLGRHIEQPTRRAFLQRSLSLGGLSLLSGCAVVDEES
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHCCHHCCHHH
VEKALMKVSRFNDKAQAWLFDPNRLAPTYPESMITRPFPFNAYYGEDEIREVAEESYRLE
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHEEE
VSGMVADKRTWTLAELRAMPQMAQVTRHICVEGWSAIGKWGGVPFASFLRRVGADTTAKY
EEEEEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHH
VGFKCADDYYTSVDMPTALHPQTLLTLTYDDQPLPPRYGFPMKLRMPTKLGYKNPKHIQA
HCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCHHCCCCCCCEEEE
IFVTNTYPGGYWEDQGYNWFGGS
EEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]