| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907136
Identifier: 71907136
GI number: 71907136
Start: 1619943
End: 1620782
Strand: Reverse
Name: 71907136
Synonym: Daro_1504
Alternate gene names: NA
Gene position: 1620782-1619943 (Counterclockwise)
Preceding gene: 71907149
Following gene: 71907120
Centisome position: 36.01
GC content: 56.43
Gene sequence:
>840_bases ATGCTCAAAGCCAAACTTGGTTGCATCGCTGCATCCCTGTTTGTTGCCACTTCGGCACAAGCACTAACGATCAATTACAG CAATTTCAGCGACATGTCCGCGTTCCAGCAAAACGGATCAACAGCCAGCATCGCAGACAACGCTTCCTACCTCCGCCTGA CCGACAATCTGGGACAGTCGGGCAGCGCATTTCTCACAAACACGATCAGCCTGTCCAACCAGGCTTCGTTCAGTACCTAT TTCTCTTTCCAGATTTCCAACCCGCAGGGAATTTCAGATGGTGATGGTCAGGGCGCGGATGGCATCGTCTTCGTCGTCCA AACAGTCTCCAACACTGCAGGCGGGGCTGGTGGAGGCATCGGCTACACCGGCATCAGCAAGAGTCTGGGGATCGAGTTTG ACACCTGGGATAACGGCTCCGGCCTGAACGACCCCAATGGCAACCACATCGGGATTGACATTGGGGGGAGCTTTAACGGT CCGACCGCGCTCATTGGCAACCGGATGAATAATGGTGCCAAGTGGTACGCATGGGTTGACTACAACGGTGCGACCAACCT CGTCGAGGTGCGACTCTCCGAAAGCAATACGCGTCCCACCGACCCAACGCTGACGCGTTCCGTCAATCTCATTGATCAAC TCGGCCAAACCGATGCGTATATTGGATTCACTTCCGGAACGGGCGCTGCTGGCGGATTTCACGATATTCTGGCGTGGCAG CTCAACGACAACTTTCAGCCAATCGACCCCGGCACGCAGGTTCCCGAACCGGCCACACTGGCGCTGCTCGGACTTGGCGG CCTTGGCATGATTTTGGCGCGACGCCGCAGGGCTGTTTGA
Upstream 100 bases:
>100_bases GCCACTCGAAAAATCGAAAAGGTGTTTGTTTTTGTTACGTTAAGTTAATTGGCGTGCATATTGCTTGATCGGCACAACCC AAACAAATAGGGAATAAATC
Downstream 100 bases:
>100_bases TATCAGGGCACGCCCAATGCAAAAGCGCCATCATTCGATGGCTCTCCTGAATGCTGACGAACCCCCGATTTTTCGGGGGT TTTGTTTTTCTGATGGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Legume Lectin Beta Domain-Containing Protein; Legume Lectin Beta Domain; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Glucosesorbosone Dehydrogenase; Protein Kinase
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MLKAKLGCIAASLFVATSAQALTINYSNFSDMSAFQQNGSTASIADNASYLRLTDNLGQSGSAFLTNTISLSNQASFSTY FSFQISNPQGISDGDGQGADGIVFVVQTVSNTAGGAGGGIGYTGISKSLGIEFDTWDNGSGLNDPNGNHIGIDIGGSFNG PTALIGNRMNNGAKWYAWVDYNGATNLVEVRLSESNTRPTDPTLTRSVNLIDQLGQTDAYIGFTSGTGAAGGFHDILAWQ LNDNFQPIDPGTQVPEPATLALLGLGGLGMILARRRRAV
Sequences:
>Translated_279_residues MLKAKLGCIAASLFVATSAQALTINYSNFSDMSAFQQNGSTASIADNASYLRLTDNLGQSGSAFLTNTISLSNQASFSTY FSFQISNPQGISDGDGQGADGIVFVVQTVSNTAGGAGGGIGYTGISKSLGIEFDTWDNGSGLNDPNGNHIGIDIGGSFNG PTALIGNRMNNGAKWYAWVDYNGATNLVEVRLSESNTRPTDPTLTRSVNLIDQLGQTDAYIGFTSGTGAAGGFHDILAWQ LNDNFQPIDPGTQVPEPATLALLGLGGLGMILARRRRAV >Mature_279_residues MLKAKLGCIAASLFVATSAQALTINYSNFSDMSAFQQNGSTASIADNASYLRLTDNLGQSGSAFLTNTISLSNQASFSTY FSFQISNPQGISDGDGQGADGIVFVVQTVSNTAGGAGGGIGYTGISKSLGIEFDTWDNGSGLNDPNGNHIGIDIGGSFNG PTALIGNRMNNGAKWYAWVDYNGATNLVEVRLSESNTRPTDPTLTRSVNLIDQLGQTDAYIGFTSGTGAAGGFHDILAWQ LNDNFQPIDPGTQVPEPATLALLGLGGLGMILARRRRAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29049; Mature: 29049
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKAKLGCIAASLFVATSAQALTINYSNFSDMSAFQQNGSTASIADNASYLRLTDNLGQS CCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCEEEEECCCEEEEEECCCCCC GSAFLTNTISLSNQASFSTYFSFQISNPQGISDGDGQGADGIVFVVQTVSNTAGGAGGGI CCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC GYTGISKSLGIEFDTWDNGSGLNDPNGNHIGIDIGGSFNGPTALIGNRMNNGAKWYAWVD CCCCCCHHHCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEEEE YNGATNLVEVRLSESNTRPTDPTLTRSVNLIDQLGQTDAYIGFTSGTGAAGGFHDILAWQ ECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEE LNDNFQPIDPGTQVPEPATLALLGLGGLGMILARRRRAV ECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure MLKAKLGCIAASLFVATSAQALTINYSNFSDMSAFQQNGSTASIADNASYLRLTDNLGQS CCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHCCCEEEEECCCEEEEEECCCCCC GSAFLTNTISLSNQASFSTYFSFQISNPQGISDGDGQGADGIVFVVQTVSNTAGGAGGGI CCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC GYTGISKSLGIEFDTWDNGSGLNDPNGNHIGIDIGGSFNGPTALIGNRMNNGAKWYAWVD CCCCCCHHHCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEEEE YNGATNLVEVRLSESNTRPTDPTLTRSVNLIDQLGQTDAYIGFTSGTGAAGGFHDILAWQ ECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEE LNDNFQPIDPGTQVPEPATLALLGLGGLGMILARRRRAV ECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA