| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is ctaE [H]
Identifier: 71907099
GI number: 71907099
Start: 1590736
End: 1591608
Strand: Reverse
Name: ctaE [H]
Synonym: Daro_1467
Alternate gene names: 71907099
Gene position: 1591608-1590736 (Counterclockwise)
Preceding gene: 71907100
Following gene: 71907097
Centisome position: 35.36
GC content: 64.03
Gene sequence:
>873_bases ATGAAAACCAGTCCAGCCCATGCCGCATCCGGCGAACATTATTTCGTTCCCCAGCCCAGCTACTACCCGGTCATCCTGTC GGCCGGCATGTTCCTGCTCGCCCTCGGCTTCGTCCAGTTGCTCAACCACATGGCTCCGGGCAAGTGGGTCATGTTCGGTG GCACCGGCGTCATCCTCACCGTGCTGTTCGGCTGGTTCGGCAAGGTCATCGCCGAATCGCAAAGCGGCGCCTATCGCGAC TGGGAGGACCGCTCCTTCCGCTTCGGCATGATCTGGTTCATCGCCACCGAGGTCATGTTCTTCGCCGCCTTCTTCGGCGC CCTGTTCTACGTCCGCATGATTTCCGTGCCCCGCCTCGGCGACATGATGGCCATGCACGGTTTCAGCCTGTGGCCGGAAT TCGCCGGCACCTGGCCGACCAGCGGCCCGAAAGGCGCCGCCTTCACGCCGATGGGCGCCTGGGGCATCCCGGCCCTGAAT ACTGCCCTGCTGCTCAGTTCCGGCGCCACGGTGACCTGGGCACACTGGGGACTGCTGCGCGGCAAACGCACGCAACTGGC ACTCGGCCTGGCGGCCACGGTCCTGCTCGGCAGTACCTTCCTCGGCTTCCAGGCCTGGGAATATCACCATGCCTACAGCG AACTCGGCCTGACCATGGGCGCCGGCGCCTACGGGGCAACCTTCTTCATGCTGACCGGTTTCCACGGCTTCCACGTCACG CTCGGCACCATCATGCTGGCGGTCATCCTGCTGCGCAGCCTGAGCGGCCATTTCAGCGCCGAGCGCCACTTCGCCTTCGA GGCAGTGGCCTGGTACTGGCACTTCGTTGATGTGGTGTGGCTGATCCTCTTCGTCTTCGTCTATTGGCTGTAG
Upstream 100 bases:
>100_bases AGCCCGAGGTCAGCCGCGACATCAGCCACATCACCCTGTCCTACGCCTTTTTCAGCATCGACGGACAACGCCAGACTCTG ACCCGCTCCGGGGAGGCCCG
Downstream 100 bases:
>100_bases CCGGGAATGAAGCCGAAGCGGAATCCGATCAGCAGCAGAATGAACAGGGCGATCGACAAGCCGATGCGCCAGGTCAGCAC GCGTACCGTGCGTTCGCCGG
Product: cytochrome c oxidase, subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKTSPAHAASGEHYFVPQPSYYPVILSAGMFLLALGFVQLLNHMAPGKWVMFGGTGVILTVLFGWFGKVIAESQSGAYRD WEDRSFRFGMIWFIATEVMFFAAFFGALFYVRMISVPRLGDMMAMHGFSLWPEFAGTWPTSGPKGAAFTPMGAWGIPALN TALLLSSGATVTWAHWGLLRGKRTQLALGLAATVLLGSTFLGFQAWEYHHAYSELGLTMGAGAYGATFFMLTGFHGFHVT LGTIMLAVILLRSLSGHFSAERHFAFEAVAWYWHFVDVVWLILFVFVYWL
Sequences:
>Translated_290_residues MKTSPAHAASGEHYFVPQPSYYPVILSAGMFLLALGFVQLLNHMAPGKWVMFGGTGVILTVLFGWFGKVIAESQSGAYRD WEDRSFRFGMIWFIATEVMFFAAFFGALFYVRMISVPRLGDMMAMHGFSLWPEFAGTWPTSGPKGAAFTPMGAWGIPALN TALLLSSGATVTWAHWGLLRGKRTQLALGLAATVLLGSTFLGFQAWEYHHAYSELGLTMGAGAYGATFFMLTGFHGFHVT LGTIMLAVILLRSLSGHFSAERHFAFEAVAWYWHFVDVVWLILFVFVYWL >Mature_290_residues MKTSPAHAASGEHYFVPQPSYYPVILSAGMFLLALGFVQLLNHMAPGKWVMFGGTGVILTVLFGWFGKVIAESQSGAYRD WEDRSFRFGMIWFIATEVMFFAAFFGALFYVRMISVPRLGDMMAMHGFSLWPEFAGTWPTSGPKGAAFTPMGAWGIPALN TALLLSSGATVTWAHWGLLRGKRTQLALGLAATVLLGSTFLGFQAWEYHHAYSELGLTMGAGAYGATFFMLTGFHGFHVT LGTIMLAVILLRSLSGHFSAERHFAFEAVAWYWHFVDVVWLILFVFVYWL
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=228, Percent_Identity=41.6666666666667, Blast_Score=159, Evalue=3e-39, Organism=Escherichia coli, GI1786633, Length=130, Percent_Identity=32.3076923076923, Blast_Score=69, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6226542, Length=234, Percent_Identity=32.9059829059829, Blast_Score=105, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 32175; Mature: 32175
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSPAHAASGEHYFVPQPSYYPVILSAGMFLLALGFVQLLNHMAPGKWVMFGGTGVILT CCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHH VLFGWFGKVIAESQSGAYRDWEDRSFRFGMIWFIATEVMFFAAFFGALFYVRMISVPRLG HHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DMMAMHGFSLWPEFAGTWPTSGPKGAAFTPMGAWGIPALNTALLLSSGATVTWAHWGLLR HHHHHHCCHHCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHC GKRTQLALGLAATVLLGSTFLGFQAWEYHHAYSELGLTMGAGAYGATFFMLTGFHGFHVT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHH LGTIMLAVILLRSLSGHFSAERHFAFEAVAWYWHFVDVVWLILFVFVYWL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKTSPAHAASGEHYFVPQPSYYPVILSAGMFLLALGFVQLLNHMAPGKWVMFGGTGVILT CCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHH VLFGWFGKVIAESQSGAYRDWEDRSFRFGMIWFIATEVMFFAAFFGALFYVRMISVPRLG HHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DMMAMHGFSLWPEFAGTWPTSGPKGAAFTPMGAWGIPALNTALLLSSGATVTWAHWGLLR HHHHHHCCHHCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHC GKRTQLALGLAATVLLGSTFLGFQAWEYHHAYSELGLTMGAGAYGATFFMLTGFHGFHVT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHH LGTIMLAVILLRSLSGHFSAERHFAFEAVAWYWHFVDVVWLILFVFVYWL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]