Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is ctaE [H]

Identifier: 71907099

GI number: 71907099

Start: 1590736

End: 1591608

Strand: Reverse

Name: ctaE [H]

Synonym: Daro_1467

Alternate gene names: 71907099

Gene position: 1591608-1590736 (Counterclockwise)

Preceding gene: 71907100

Following gene: 71907097

Centisome position: 35.36

GC content: 64.03

Gene sequence:

>873_bases
ATGAAAACCAGTCCAGCCCATGCCGCATCCGGCGAACATTATTTCGTTCCCCAGCCCAGCTACTACCCGGTCATCCTGTC
GGCCGGCATGTTCCTGCTCGCCCTCGGCTTCGTCCAGTTGCTCAACCACATGGCTCCGGGCAAGTGGGTCATGTTCGGTG
GCACCGGCGTCATCCTCACCGTGCTGTTCGGCTGGTTCGGCAAGGTCATCGCCGAATCGCAAAGCGGCGCCTATCGCGAC
TGGGAGGACCGCTCCTTCCGCTTCGGCATGATCTGGTTCATCGCCACCGAGGTCATGTTCTTCGCCGCCTTCTTCGGCGC
CCTGTTCTACGTCCGCATGATTTCCGTGCCCCGCCTCGGCGACATGATGGCCATGCACGGTTTCAGCCTGTGGCCGGAAT
TCGCCGGCACCTGGCCGACCAGCGGCCCGAAAGGCGCCGCCTTCACGCCGATGGGCGCCTGGGGCATCCCGGCCCTGAAT
ACTGCCCTGCTGCTCAGTTCCGGCGCCACGGTGACCTGGGCACACTGGGGACTGCTGCGCGGCAAACGCACGCAACTGGC
ACTCGGCCTGGCGGCCACGGTCCTGCTCGGCAGTACCTTCCTCGGCTTCCAGGCCTGGGAATATCACCATGCCTACAGCG
AACTCGGCCTGACCATGGGCGCCGGCGCCTACGGGGCAACCTTCTTCATGCTGACCGGTTTCCACGGCTTCCACGTCACG
CTCGGCACCATCATGCTGGCGGTCATCCTGCTGCGCAGCCTGAGCGGCCATTTCAGCGCCGAGCGCCACTTCGCCTTCGA
GGCAGTGGCCTGGTACTGGCACTTCGTTGATGTGGTGTGGCTGATCCTCTTCGTCTTCGTCTATTGGCTGTAG

Upstream 100 bases:

>100_bases
AGCCCGAGGTCAGCCGCGACATCAGCCACATCACCCTGTCCTACGCCTTTTTCAGCATCGACGGACAACGCCAGACTCTG
ACCCGCTCCGGGGAGGCCCG

Downstream 100 bases:

>100_bases
CCGGGAATGAAGCCGAAGCGGAATCCGATCAGCAGCAGAATGAACAGGGCGATCGACAAGCCGATGCGCCAGGTCAGCAC
GCGTACCGTGCGTTCGCCGG

Product: cytochrome c oxidase, subunit III

Products: NA

Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MKTSPAHAASGEHYFVPQPSYYPVILSAGMFLLALGFVQLLNHMAPGKWVMFGGTGVILTVLFGWFGKVIAESQSGAYRD
WEDRSFRFGMIWFIATEVMFFAAFFGALFYVRMISVPRLGDMMAMHGFSLWPEFAGTWPTSGPKGAAFTPMGAWGIPALN
TALLLSSGATVTWAHWGLLRGKRTQLALGLAATVLLGSTFLGFQAWEYHHAYSELGLTMGAGAYGATFFMLTGFHGFHVT
LGTIMLAVILLRSLSGHFSAERHFAFEAVAWYWHFVDVVWLILFVFVYWL

Sequences:

>Translated_290_residues
MKTSPAHAASGEHYFVPQPSYYPVILSAGMFLLALGFVQLLNHMAPGKWVMFGGTGVILTVLFGWFGKVIAESQSGAYRD
WEDRSFRFGMIWFIATEVMFFAAFFGALFYVRMISVPRLGDMMAMHGFSLWPEFAGTWPTSGPKGAAFTPMGAWGIPALN
TALLLSSGATVTWAHWGLLRGKRTQLALGLAATVLLGSTFLGFQAWEYHHAYSELGLTMGAGAYGATFFMLTGFHGFHVT
LGTIMLAVILLRSLSGHFSAERHFAFEAVAWYWHFVDVVWLILFVFVYWL
>Mature_290_residues
MKTSPAHAASGEHYFVPQPSYYPVILSAGMFLLALGFVQLLNHMAPGKWVMFGGTGVILTVLFGWFGKVIAESQSGAYRD
WEDRSFRFGMIWFIATEVMFFAAFFGALFYVRMISVPRLGDMMAMHGFSLWPEFAGTWPTSGPKGAAFTPMGAWGIPALN
TALLLSSGATVTWAHWGLLRGKRTQLALGLAATVLLGSTFLGFQAWEYHHAYSELGLTMGAGAYGATFFMLTGFHGFHVT
LGTIMLAVILLRSLSGHFSAERHFAFEAVAWYWHFVDVVWLILFVFVYWL

Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Homo sapiens, GI251831113, Length=228, Percent_Identity=41.6666666666667, Blast_Score=159, Evalue=3e-39,
Organism=Escherichia coli, GI1786633, Length=130, Percent_Identity=32.3076923076923, Blast_Score=69, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6226542, Length=234, Percent_Identity=32.9059829059829, Blast_Score=105, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 32175; Mature: 32175

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSPAHAASGEHYFVPQPSYYPVILSAGMFLLALGFVQLLNHMAPGKWVMFGGTGVILT
CCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHH
VLFGWFGKVIAESQSGAYRDWEDRSFRFGMIWFIATEVMFFAAFFGALFYVRMISVPRLG
HHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
DMMAMHGFSLWPEFAGTWPTSGPKGAAFTPMGAWGIPALNTALLLSSGATVTWAHWGLLR
HHHHHHCCHHCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHC
GKRTQLALGLAATVLLGSTFLGFQAWEYHHAYSELGLTMGAGAYGATFFMLTGFHGFHVT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHH
LGTIMLAVILLRSLSGHFSAERHFAFEAVAWYWHFVDVVWLILFVFVYWL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKTSPAHAASGEHYFVPQPSYYPVILSAGMFLLALGFVQLLNHMAPGKWVMFGGTGVILT
CCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHH
VLFGWFGKVIAESQSGAYRDWEDRSFRFGMIWFIATEVMFFAAFFGALFYVRMISVPRLG
HHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
DMMAMHGFSLWPEFAGTWPTSGPKGAAFTPMGAWGIPALNTALLLSSGATVTWAHWGLLR
HHHHHHCCHHCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHC
GKRTQLALGLAATVLLGSTFLGFQAWEYHHAYSELGLTMGAGAYGATFFMLTGFHGFHVT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHH
LGTIMLAVILLRSLSGHFSAERHFAFEAVAWYWHFVDVVWLILFVFVYWL
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3019767; 2832167; 7651515 [H]