| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is nifP [H]
Identifier: 71907029
GI number: 71907029
Start: 1525215
End: 1525991
Strand: Reverse
Name: nifP [H]
Synonym: Daro_1397
Alternate gene names: 71907029
Gene position: 1525991-1525215 (Counterclockwise)
Preceding gene: 71907030
Following gene: 71907028
Centisome position: 33.9
GC content: 65.77
Gene sequence:
>777_bases ATGTCTGAAGCGATGACCATGACCGCAAGCACAATGGCAGCACCCGGCCTCTGGGCGACCCTGAAGGAAGACCTGAGCTG CGTCTTTCAGCGCGACCCGGCGGCCCGCTCGACACTGGAGGTACTGACCACCTACCCCGGCGTCCATGCCATCCTCGCCC ACCGCCTGTCGCACCGCCTGTGGCAGAACGGCTGGCGCTTCCCGGCCCGCTTCCTCTCCTTCCTGAGCCGGACGCTGACC AACGTAGACATCCACCCTGGTGCCACCATCGGCCACCGCTTCTTCATCGATCATGGCGCCTGTGTGGTCATCGGCGAAAC GGCTGAGGTCGGCGACGATGTCACGCTCTACCATGGTGTAACGCTCGGTGGCACCTCGTGGAACAAGGGAAAGCGCCACC CGACCCTGGCCGACGGTGTCGTCGTCGGGGCCGGCGCCAAGATACTCGGCCCGATCTGCATTGGCGAACGCGTCCGCGTC GGCGCCAATTCGGTGGTCGTCAAGGATGTGCCGGCCGACCGGACGGTGGTCGGCGTACCCGGCCGGATCGTCGACACCCG GGTCGGCACGGCACGCCCCGAAAATGGCATCAGCCTGGACCATAACGTGATGCCCGATCCGGTCGCCAAGTCCATCGCCT GCCTGATCGAACGCATCGAAACCCTGGAGAAGGAACTGGCTGAGATCCGCCATGAACCGCCTCCCCCCGACCACAGTGGC GATTGCCGCACCTGCACCGCCGGCGACTTGTGCTGCGAGCACGAGGCCATGCACTGA
Upstream 100 bases:
>100_bases GCCATGCTGCCGCGCGTCCGCACCTTTGTCGCCGAACACAAACACCCGCCGGAAGTGTCCGATCTGCGCGACCTTCTGAG CTCCCTCCGGAGCAACCTCC
Downstream 100 bases:
>100_bases ACACTGGACTGAACCAAACCATGGACCTGCTCGACTTCTCCGACTGCAAGCTCTACTTCGAGGACGCACTGCCCCCCGAG GCCGAGCGGCTGATCGCCCA
Product: Serine O-acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSEAMTMTASTMAAPGLWATLKEDLSCVFQRDPAARSTLEVLTTYPGVHAILAHRLSHRLWQNGWRFPARFLSFLSRTLT NVDIHPGATIGHRFFIDHGACVVIGETAEVGDDVTLYHGVTLGGTSWNKGKRHPTLADGVVVGAGAKILGPICIGERVRV GANSVVVKDVPADRTVVGVPGRIVDTRVGTARPENGISLDHNVMPDPVAKSIACLIERIETLEKELAEIRHEPPPPDHSG DCRTCTAGDLCCEHEAMH
Sequences:
>Translated_258_residues MSEAMTMTASTMAAPGLWATLKEDLSCVFQRDPAARSTLEVLTTYPGVHAILAHRLSHRLWQNGWRFPARFLSFLSRTLT NVDIHPGATIGHRFFIDHGACVVIGETAEVGDDVTLYHGVTLGGTSWNKGKRHPTLADGVVVGAGAKILGPICIGERVRV GANSVVVKDVPADRTVVGVPGRIVDTRVGTARPENGISLDHNVMPDPVAKSIACLIERIETLEKELAEIRHEPPPPDHSG DCRTCTAGDLCCEHEAMH >Mature_257_residues SEAMTMTASTMAAPGLWATLKEDLSCVFQRDPAARSTLEVLTTYPGVHAILAHRLSHRLWQNGWRFPARFLSFLSRTLTN VDIHPGATIGHRFFIDHGACVVIGETAEVGDDVTLYHGVTLGGTSWNKGKRHPTLADGVVVGAGAKILGPICIGERVRVG ANSVVVKDVPADRTVVGVPGRIVDTRVGTARPENGISLDHNVMPDPVAKSIACLIERIETLEKELAEIRHEPPPPDHSGD CRTCTAGDLCCEHEAMH
Specific function: Probable serine acetyltransferase required for optimizing the expression of nitrogenase activity. May be required to boost rates of synthesis or intracellular concentrations of cysteine or methionine [H]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=172, Percent_Identity=44.1860465116279, Blast_Score=140, Evalue=7e-35, Organism=Escherichia coli, GI1788371, Length=145, Percent_Identity=38.6206896551724, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR005881 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 27803; Mature: 27672
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAMTMTASTMAAPGLWATLKEDLSCVFQRDPAARSTLEVLTTYPGVHAILAHRLSHRL CCCCCEEHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH WQNGWRFPARFLSFLSRTLTNVDIHPGATIGHRFFIDHGACVVIGETAEVGDDVTLYHGV HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCHHCCCCEEEEECE TLGGTSWNKGKRHPTLADGVVVGAGAKILGPICIGERVRVGANSVVVKDVPADRTVVGVP EECCCCCCCCCCCCCHHCCEEEECCHHHHHHHHCCCEEEECCCEEEEEECCCCCEEEECC GRIVDTRVGTARPENGISLDHNVMPDPVAKSIACLIERIETLEKELAEIRHEPPPPDHSG CEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DCRTCTAGDLCCEHEAMH CCCCCCCCCHHCCCCCCC >Mature Secondary Structure SEAMTMTASTMAAPGLWATLKEDLSCVFQRDPAARSTLEVLTTYPGVHAILAHRLSHRL CCCCEEHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH WQNGWRFPARFLSFLSRTLTNVDIHPGATIGHRFFIDHGACVVIGETAEVGDDVTLYHGV HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCHHCCCCEEEEECE TLGGTSWNKGKRHPTLADGVVVGAGAKILGPICIGERVRVGANSVVVKDVPADRTVVGVP EECCCCCCCCCCCCCHHCCEEEECCHHHHHHHHCCCEEEECCCEEEEEECCCCCEEEECC GRIVDTRVGTARPENGISLDHNVMPDPVAKSIACLIERIETLEKELAEIRHEPPPPDHSG CEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DCRTCTAGDLCCEHEAMH CCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1885524 [H]