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The map label for this gene is dedA [C]

Identifier: 71907021

GI number: 71907021

Start: 1519188

End: 1520117

Strand: Reverse

Name: dedA [C]

Synonym: Daro_1389

Alternate gene names: 71907021

Gene position: 1520117-1519188 (Counterclockwise)

Preceding gene: 71907022

Following gene: 71907020

Centisome position: 33.77

GC content: 64.19

Gene sequence:

>930_bases
ATGGAAATTTCCCAGCTTGGCGAAGCGCTCCAGCGTGATGCAGTCTGGGTCGTTTTCCTGAACGTCCTGCTGCAACAGAT
CGGGCTACCGGTGCCAGCCGTTCCCACCCTGCTCCTGGCCGGCAGCCTGATCGTCGGCTCCTGGCAGTTTGCCAGCGTCT
TGGCCGCCGCCATCGTCGCGTCGGTGCTGGCCGACTGGGTCTGGTACCTGGCTGGGCGCGCCTTTGGCTATCGCGTGCTG
GCCGGCCTATGCAAACTGTCGATCAATCCCGGCTCCTGCGTCAGCCAGACCGAGGCCCGCTTTGTCCGCTGGGGGCTTGG
ATCGCTGGTCTTTGCCAAGTTTGTTCCGGGTTTTTCAACGGTGGCACCACCCATTGCCGGCTCATTGCGCATGGGCTTGC
CGGGTTTCCTGCTTGCCGCCGCCACCGGGGCTGCCCTGTGGGCCGGGCTTGGCCTGGGCACGGGCTGGCTTTTGCGTAAA
GAGGTGCATCGCGCCATCGAGGCGCTGGACCAGAACTCCGGAAGCCTGCTCGGGCTGATCGCCGGCACGATCGCGCTGTG
GCTGGGCTGGAAGCTATGGCAGAAATATCGCTTCCGGCAATTGTCGGCTGTCCCTCACATCACGCCGGTTGAGCTTATGG
CCGCAATGGAAACCGACCAGCCCCCGCTGGTGCTCGATCTGCGCGGGCACAGCATGGTGGCCGAAACCGGCCCGATCACC
GGTGCAACAGTGGCCGAACATGACAGGCTGCTCGATGCCGTGGGCGAATGGCCCAAAAACCTGCCTATCGTGACCTTGTG
CGCCTGCCCGGAGGACGCCGGGGCGATACAGGCAGCCCGCCAATTGCTCAACGCAGGCTTCCTGTCGGTACGGCCACTCA
AGGGGGGATACGAAGCTTGGCTAGCGACCGCCAATGGGAACAACGTCTGA

Upstream 100 bases:

>100_bases
GTTCAATCGCTGTGAACCAATCGCCCCGGCCATCGTCGAACCGTGACGATCTATTTCCCGACTTGGCCGGGCCGGTCAAA
CATGAAAGAAAGGCAGCTTG

Downstream 100 bases:

>100_bases
CTAGCAAAATTAAATTTAAGTCTGTTGTGACTGCTTGATGAATGAACGCTGTTTCTTAACCAGTCACCCGCTGCCGAAGG
CAGTTCCTGCCGGTAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MEISQLGEALQRDAVWVVFLNVLLQQIGLPVPAVPTLLLAGSLIVGSWQFASVLAAAIVASVLADWVWYLAGRAFGYRVL
AGLCKLSINPGSCVSQTEARFVRWGLGSLVFAKFVPGFSTVAPPIAGSLRMGLPGFLLAAATGAALWAGLGLGTGWLLRK
EVHRAIEALDQNSGSLLGLIAGTIALWLGWKLWQKYRFRQLSAVPHITPVELMAAMETDQPPLVLDLRGHSMVAETGPIT
GATVAEHDRLLDAVGEWPKNLPIVTLCACPEDAGAIQAARQLLNAGFLSVRPLKGGYEAWLATANGNNV

Sequences:

>Translated_309_residues
MEISQLGEALQRDAVWVVFLNVLLQQIGLPVPAVPTLLLAGSLIVGSWQFASVLAAAIVASVLADWVWYLAGRAFGYRVL
AGLCKLSINPGSCVSQTEARFVRWGLGSLVFAKFVPGFSTVAPPIAGSLRMGLPGFLLAAATGAALWAGLGLGTGWLLRK
EVHRAIEALDQNSGSLLGLIAGTIALWLGWKLWQKYRFRQLSAVPHITPVELMAAMETDQPPLVLDLRGHSMVAETGPIT
GATVAEHDRLLDAVGEWPKNLPIVTLCACPEDAGAIQAARQLLNAGFLSVRPLKGGYEAWLATANGNNV
>Mature_309_residues
MEISQLGEALQRDAVWVVFLNVLLQQIGLPVPAVPTLLLAGSLIVGSWQFASVLAAAIVASVLADWVWYLAGRAFGYRVL
AGLCKLSINPGSCVSQTEARFVRWGLGSLVFAKFVPGFSTVAPPIAGSLRMGLPGFLLAAATGAALWAGLGLGTGWLLRK
EVHRAIEALDQNSGSLLGLIAGTIALWLGWKLWQKYRFRQLSAVPHITPVELMAAMETDQPPLVLDLRGHSMVAETGPIT
GATVAEHDRLLDAVGEWPKNLPIVTLCACPEDAGAIQAARQLLNAGFLSVRPLKGGYEAWLATANGNNV

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 32819; Mature: 32819

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEISQLGEALQRDAVWVVFLNVLLQQIGLPVPAVPTLLLAGSLIVGSWQFASVLAAAIVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SVLADWVWYLAGRAFGYRVLAGLCKLSINPGSCVSQTEARFVRWGLGSLVFAKFVPGFST
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VAPPIAGSLRMGLPGFLLAAATGAALWAGLGLGTGWLLRKEVHRAIEALDQNSGSLLGLI
HCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
AGTIALWLGWKLWQKYRFRQLSAVPHITPVELMAAMETDQPPLVLDLRGHSMVAETGPIT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCEEEECCCCCC
GATVAEHDRLLDAVGEWPKNLPIVTLCACPEDAGAIQAARQLLNAGFLSVRPLKGGYEAW
CCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEECCCCCHHHE
LATANGNNV
EEECCCCCC
>Mature Secondary Structure
MEISQLGEALQRDAVWVVFLNVLLQQIGLPVPAVPTLLLAGSLIVGSWQFASVLAAAIVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SVLADWVWYLAGRAFGYRVLAGLCKLSINPGSCVSQTEARFVRWGLGSLVFAKFVPGFST
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VAPPIAGSLRMGLPGFLLAAATGAALWAGLGLGTGWLLRKEVHRAIEALDQNSGSLLGLI
HCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
AGTIALWLGWKLWQKYRFRQLSAVPHITPVELMAAMETDQPPLVLDLRGHSMVAETGPIT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCEEEECCCCCC
GATVAEHDRLLDAVGEWPKNLPIVTLCACPEDAGAIQAARQLLNAGFLSVRPLKGGYEAW
CCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEECCCCCHHHE
LATANGNNV
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]