Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71907018

Identifier: 71907018

GI number: 71907018

Start: 1517007

End: 1517810

Strand: Reverse

Name: 71907018

Synonym: Daro_1386

Alternate gene names: NA

Gene position: 1517810-1517007 (Counterclockwise)

Preceding gene: 71907019

Following gene: 71907017

Centisome position: 33.72

GC content: 53.98

Gene sequence:

>804_bases
ATGAAACGTCAAGAAGGGTCAGCATTCGCTGGCCCTTTTTGTGTCTACAATTATTTACCAAACCACCGCTGCAACATCCG
GATACAAAGCGTTGCAATGGAACTGAACTCATACCCCCCGTTTGATGTGAAGATGGTTTCAATTCAAAAAACAAGCGAGA
CCAAATCAATGAACCAGACCAAAAACGCCCATCAAGACATGAACATCGCAACTTTCCTCAATACATCACGGAAATATCTC
TCACTCCCCGAAGGCGGAAGCACATCAACCCAGCAAATTTTCGCTGCCATCGTGCCGTCGAAATCACAAAGGATCCCAAT
GAGTTCATATCGCAAAGTGGTTCAATCGCTCCTCCTCGCAGCAGGCGTTGGTGCCTTTGCAGCAGGCCCGGCCATGGCGG
ACCCTGGCTGCGATCATCGGGGCGGACATTCGGAACGGCATGCCAAAATGATGGAGCAGCATCACACCCAGCTGCATGAG
GCCCTGAAACTGACAGCCGAACAGGAACCCGCCTGGAAAAAGCTGATGGATTCCGAACAACCGAGAACGGCTGCCCAGGG
TGGGCCAGCAGAAGATTGGGCGAAGCTCAATGCGCCGGAGCGTGCTGAAAAAATGCTTGAGTTATCCAAAGCCCGGCAAG
CGCAGATGACTGACCATGTCGCAGCCCTCAAAGCGTTCTACGCCGCACTGACCCCGGAACAACAGAAGATCTTTGAGGAT
TTCCATGCCGGTCCTCGCGGTGGTATGGCCGGCAAACCGGCCCCCAAGGCCTCGAGCACCGGCAAGGCCCCGAACAAGCC
CTGA

Upstream 100 bases:

>100_bases
GGCCGCACCGGTAGCCGCCCCCGCACCTGCGGCCAAGTAACAGCATCTCTCCTGCCGAACAGGCTTGCTCCGGCCAGCAT
GGTCGGAGACTTTTTCCGGC

Downstream 100 bases:

>100_bases
CTCCCGTCAAATCCGTTGAAGCCTGGCAGGCCCGGGCTTCCTTTTGCAACACCTAACCGATGGAAAAGCTTGTCAGGATT
GGCTAGTTTCAATCCTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKRQEGSAFAGPFCVYNYLPNHRCNIRIQSVAMELNSYPPFDVKMVSIQKTSETKSMNQTKNAHQDMNIATFLNTSRKYL
SLPEGGSTSTQQIFAAIVPSKSQRIPMSSYRKVVQSLLLAAGVGAFAAGPAMADPGCDHRGGHSERHAKMMEQHHTQLHE
ALKLTAEQEPAWKKLMDSEQPRTAAQGGPAEDWAKLNAPERAEKMLELSKARQAQMTDHVAALKAFYAALTPEQQKIFED
FHAGPRGGMAGKPAPKASSTGKAPNKP

Sequences:

>Translated_267_residues
MKRQEGSAFAGPFCVYNYLPNHRCNIRIQSVAMELNSYPPFDVKMVSIQKTSETKSMNQTKNAHQDMNIATFLNTSRKYL
SLPEGGSTSTQQIFAAIVPSKSQRIPMSSYRKVVQSLLLAAGVGAFAAGPAMADPGCDHRGGHSERHAKMMEQHHTQLHE
ALKLTAEQEPAWKKLMDSEQPRTAAQGGPAEDWAKLNAPERAEKMLELSKARQAQMTDHVAALKAFYAALTPEQQKIFED
FHAGPRGGMAGKPAPKASSTGKAPNKP
>Mature_267_residues
MKRQEGSAFAGPFCVYNYLPNHRCNIRIQSVAMELNSYPPFDVKMVSIQKTSETKSMNQTKNAHQDMNIATFLNTSRKYL
SLPEGGSTSTQQIFAAIVPSKSQRIPMSSYRKVVQSLLLAAGVGAFAAGPAMADPGCDHRGGHSERHAKMMEQHHTQLHE
ALKLTAEQEPAWKKLMDSEQPRTAAQGGPAEDWAKLNAPERAEKMLELSKARQAQMTDHVAALKAFYAALTPEQQKIFED
FHAGPRGGMAGKPAPKASSTGKAPNKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29232; Mature: 29232

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQEGSAFAGPFCVYNYLPNHRCNIRIQSVAMELNSYPPFDVKMVSIQKTSETKSMNQT
CCCCCCCCCCCHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHH
KNAHQDMNIATFLNTSRKYLSLPEGGSTSTQQIFAAIVPSKSQRIPMSSYRKVVQSLLLA
HHHHHCCHHHHHHHCCHHEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
AGVGAFAAGPAMADPGCDHRGGHSERHAKMMEQHHTQLHEALKLTAEQEPAWKKLMDSEQ
HCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
PRTAAQGGPAEDWAKLNAPERAEKMLELSKARQAQMTDHVAALKAFYAALTPEQQKIFED
CCHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FHAGPRGGMAGKPAPKASSTGKAPNKP
HCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRQEGSAFAGPFCVYNYLPNHRCNIRIQSVAMELNSYPPFDVKMVSIQKTSETKSMNQT
CCCCCCCCCCCHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHH
KNAHQDMNIATFLNTSRKYLSLPEGGSTSTQQIFAAIVPSKSQRIPMSSYRKVVQSLLLA
HHHHHCCHHHHHHHCCHHEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
AGVGAFAAGPAMADPGCDHRGGHSERHAKMMEQHHTQLHEALKLTAEQEPAWKKLMDSEQ
HCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
PRTAAQGGPAEDWAKLNAPERAEKMLELSKARQAQMTDHVAALKAFYAALTPEQQKIFED
CCHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FHAGPRGGMAGKPAPKASSTGKAPNKP
HCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA