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The map label for this gene is ycfJ [C]

Identifier: 71907009

GI number: 71907009

Start: 1510818

End: 1511258

Strand: Reverse

Name: ycfJ [C]

Synonym: Daro_1377

Alternate gene names: 71907009

Gene position: 1511258-1510818 (Counterclockwise)

Preceding gene: 71907010

Following gene: 71907008

Centisome position: 33.58

GC content: 56.92

Gene sequence:

>441_bases
ATGAAAAAGGTGTTGATTCCGGCAGTATTAATTGGCGCATTGATCAGCGGTAGTGCTTTTGCCCACCGAGAGTGGGACGA
TGATGAAGGGTATCGCCCCTACAGACCGCAGCACGTCGTCGTTTATCAGGAACCCGTCATGGTCTATCAGGCGCCCCCCG
TTGCCTATGCTCCTCCGCCGCCCCGGGTCATTTACCGGGAACGTGTTGTCTATCGGGATGCCCCGGCTTACCAATATCCA
CAGGAACCAGCGGGCTATTACGCTCAGCAGCCGGAATACCCTCCGACGTACCAATACGGAAACCGAGTGGCAGGGCAAGC
CATTGGTGCAATCGCGGGCGGCGTTATTGGTAATCAGGTTGGCCGTGGCGGTGGGCGTATGGTATCCACTGCGGTTGGCG
CCGTTCTTGGTGCTATTGCAGGTGACCGTCTGAGTTATTAG

Upstream 100 bases:

>100_bases
CCTCTCGGCGTCCAAACCCGAGGGGGATTGCAACTGAGCCAGACATAAGAAATTAGAAACCTGGATACCATTTCCTTGGT
GGCCTGAAAGGACAACCAAA

Downstream 100 bases:

>100_bases
ATAGCCCTCGGAAATCCATTGGTGTCCAAAACCAACGGGCTTTGCCATTTTGAGAGCGATGTGCTCTCACTATGACCCAC
AAACCGACCCGACCAGACAC

Product: surface antigen protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKKVLIPAVLIGALISGSAFAHREWDDDEGYRPYRPQHVVVYQEPVMVYQAPPVAYAPPPPRVIYRERVVYRDAPAYQYP
QEPAGYYAQQPEYPPTYQYGNRVAGQAIGAIAGGVIGNQVGRGGGRMVSTAVGAVLGAIAGDRLSY

Sequences:

>Translated_146_residues
MKKVLIPAVLIGALISGSAFAHREWDDDEGYRPYRPQHVVVYQEPVMVYQAPPVAYAPPPPRVIYRERVVYRDAPAYQYP
QEPAGYYAQQPEYPPTYQYGNRVAGQAIGAIAGGVIGNQVGRGGGRMVSTAVGAVLGAIAGDRLSY
>Mature_146_residues
MKKVLIPAVLIGALISGSAFAHREWDDDEGYRPYRPQHVVVYQEPVMVYQAPPVAYAPPPPRVIYRERVVYRDAPAYQYP
QEPAGYYAQQPEYPPTYQYGNRVAGQAIGAIAGGVIGNQVGRGGGRMVSTAVGAVLGAIAGDRLSY

Specific function: Unknown

COG id: COG3134

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15882; Mature: 15882

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLIPAVLIGALISGSAFAHREWDDDEGYRPYRPQHVVVYQEPVMVYQAPPVAYAPPP
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCC
PRVIYRERVVYRDAPAYQYPQEPAGYYAQQPEYPPTYQYGNRVAGQAIGAIAGGVIGNQV
CCEEEHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCC
GRGGGRMVSTAVGAVLGAIAGDRLSY
CCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKVLIPAVLIGALISGSAFAHREWDDDEGYRPYRPQHVVVYQEPVMVYQAPPVAYAPPP
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCCC
PRVIYRERVVYRDAPAYQYPQEPAGYYAQQPEYPPTYQYGNRVAGQAIGAIAGGVIGNQV
CCEEEHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHCCC
GRGGGRMVSTAVGAVLGAIAGDRLSY
CCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA