| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906999
Identifier: 71906999
GI number: 71906999
Start: 1489741
End: 1490568
Strand: Reverse
Name: 71906999
Synonym: Daro_1367
Alternate gene names: NA
Gene position: 1490568-1489741 (Counterclockwise)
Preceding gene: 71907003
Following gene: 71906998
Centisome position: 33.12
GC content: 54.95
Gene sequence:
>828_bases TTGGGGAACGCGGGGGGACGGACAATTGATCAGCGGATCAGCAAGCTAACGTCCGCGTCGGATGGACACGGAGACGTTCT AGAGGGTTGGGCACAACGTCCTACTTGCCGGGGTATTCGTCCGCGATGTGGCCAAACAGGCGATGAAGAGTCGGTTTGTG CGGACTGTCAGTTCCTGCATGAGCGGCAGCTTGGAACTGCGGAAGACGTGGAATTCTTACGTCATTGCCGCGCTATCCGG GGCTATGTCGATCAAGGTATCAGCGCCCTCTTCTCACCTTATGTCGCGGCAGTTCTGGTTGGAGCAAACGGGCGCGTTCT GGATATTGATGAGCGCTCCGCCGAATACCTGCGTACATCCCGTGTTCTAGGTATACGGCACAACCGGTTATATGCGCAGG AAAAGGACGTCAATGACCACCTGATGCAGGCCATCGACCGGGTTTCGGCTGGCGGCAAGCCGGATACCCTTATCTGTTCA GTTGGCAGGAATTCTGCCGCACGATATGCGATTTTGTTGCAACCGAATCCTCACAACTCTTCGGCCATGCCAAGCGAGAC TCACCCGGTTGTTTGTTTTATCTTCCCGCTGGGGCGTCGGCGGGTTGCCAGTGCCCAACAATTGATTTCTCTGTTTGGCC TCTCGCCTGCAGAGGCTCGATTGGCTCGGGCTTTATGCCATGGAGAGACACTGGAGGAGTTCGCGGAAGCACAGAACGTT AAGCTTTCTACCGTCAAGACTCAATTACGGGCCGTTTTCGCCAAGACTCAAACTGATCGGCAAGTTGCACTGGTTAACCT GATAGCAGGTATTCCACCTTTACGGTAA
Upstream 100 bases:
>100_bases CCTGTTGCCATTAAGACTACTCTTTGTCATAGTGCGTATGCATCATCCAGATGGATGATGGCCTATCCGTAATAATCGTG GGGATGATGGATCAACGGCG
Downstream 100 bases:
>100_bases TTCCCTCATCGCAATCAGTTTGACATTACCCCCAATTCGTTGGTTTTTCGGCCATTCCGGTCGTTGGGATGTTCAAAGCG AACGTCTGAAATTAGCGTGT
Product: regulatory protein, LuxR
Products: NA
Alternate protein names: LuxR Family Transcriptional Regulator; Regulatory Protein LuxR
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MGNAGGRTIDQRISKLTSASDGHGDVLEGWAQRPTCRGIRPRCGQTGDEESVCADCQFLHERQLGTAEDVEFLRHCRAIR GYVDQGISALFSPYVAAVLVGANGRVLDIDERSAEYLRTSRVLGIRHNRLYAQEKDVNDHLMQAIDRVSAGGKPDTLICS VGRNSAARYAILLQPNPHNSSAMPSETHPVVCFIFPLGRRRVASAQQLISLFGLSPAEARLARALCHGETLEEFAEAQNV KLSTVKTQLRAVFAKTQTDRQVALVNLIAGIPPLR
Sequences:
>Translated_275_residues MGNAGGRTIDQRISKLTSASDGHGDVLEGWAQRPTCRGIRPRCGQTGDEESVCADCQFLHERQLGTAEDVEFLRHCRAIR GYVDQGISALFSPYVAAVLVGANGRVLDIDERSAEYLRTSRVLGIRHNRLYAQEKDVNDHLMQAIDRVSAGGKPDTLICS VGRNSAARYAILLQPNPHNSSAMPSETHPVVCFIFPLGRRRVASAQQLISLFGLSPAEARLARALCHGETLEEFAEAQNV KLSTVKTQLRAVFAKTQTDRQVALVNLIAGIPPLR >Mature_274_residues GNAGGRTIDQRISKLTSASDGHGDVLEGWAQRPTCRGIRPRCGQTGDEESVCADCQFLHERQLGTAEDVEFLRHCRAIRG YVDQGISALFSPYVAAVLVGANGRVLDIDERSAEYLRTSRVLGIRHNRLYAQEKDVNDHLMQAIDRVSAGGKPDTLICSV GRNSAARYAILLQPNPHNSSAMPSETHPVVCFIFPLGRRRVASAQQLISLFGLSPAEARLARALCHGETLEEFAEAQNVK LSTVKTQLRAVFAKTQTDRQVALVNLIAGIPPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30054; Mature: 29922
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNAGGRTIDQRISKLTSASDGHGDVLEGWAQRPTCRGIRPRCGQTGDEESVCADCQFLH CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ERQLGTAEDVEFLRHCRAIRGYVDQGISALFSPYVAAVLVGANGRVLDIDERSAEYLRTS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHHHHHH RVLGIRHNRLYAQEKDVNDHLMQAIDRVSAGGKPDTLICSVGRNSAARYAILLQPNPHNS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCCCC SAMPSETHPVVCFIFPLGRRRVASAQQLISLFGLSPAEARLARALCHGETLEEFAEAQNV CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCC KLSTVKTQLRAVFAKTQTDRQVALVNLIAGIPPLR CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure GNAGGRTIDQRISKLTSASDGHGDVLEGWAQRPTCRGIRPRCGQTGDEESVCADCQFLH CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ERQLGTAEDVEFLRHCRAIRGYVDQGISALFSPYVAAVLVGANGRVLDIDERSAEYLRTS HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHHHHHH RVLGIRHNRLYAQEKDVNDHLMQAIDRVSAGGKPDTLICSVGRNSAARYAILLQPNPHNS HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCCCCC SAMPSETHPVVCFIFPLGRRRVASAQQLISLFGLSPAEARLARALCHGETLEEFAEAQNV CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCC KLSTVKTQLRAVFAKTQTDRQVALVNLIAGIPPLR CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA