Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

Click here to switch to the map view.

The map label for this gene is 71906997

Identifier: 71906997

GI number: 71906997

Start: 1487479

End: 1488981

Strand: Reverse

Name: 71906997

Synonym: Daro_1365

Alternate gene names: NA

Gene position: 1488981-1487479 (Counterclockwise)

Preceding gene: 71906998

Following gene: 71906996

Centisome position: 33.08

GC content: 50.9

Gene sequence:

>1503_bases
ATGAAAAATATCGAAAAAGTCGCTACTCAGATTGCTGATCGCGTAATCGCTGGTATCAAGCCAGAAAACGAATTTCAGCG
GCGGATACTGGAGTCCGATCAAGCGAGAGAAACAGAAGGCAAGGACGCGTTGAGCGCACTGCGTCGTTTGGGGGGGAAGA
AGCTTCACTTGGGCGAGGAAGCCATCCTGGCTAGGCGCCTTTACAACGAAATCCGGGTTTTAAAGCATCACCTGCGCGCA
AAAAAAAGCAGTCTCGGAAGATTTTGCATTGACGCCGGAATATCCGATGCCAGCCAATCGTCAAAGGAGCTGCACCGCCT
AATTCTGGCTCCTGGCAAGAACCCGAATGAAGTCCGCCTGCGCCGGACCGCCGACAAGTACCACCGGTTAATCGTGGCGA
TTAGCAAGACCACCAAGGAAAGCTCTAGCACGCTGGCCGACCGGGTACTGCGTGGCACCAGCCTACACCCGGAAAAAAAC
GTGGGGAATCTGAGTGAAACCGAAATGGTGCAAACCGCATTGCAAGGAATAGTCGACCGGATCGACGGCGAATTCGGCAT
ATTTGCCAAGTACATGGATATCTCGGAGTTGAAAGCCAGACACATTGCGAGTGGCGGCAAAGAAAACTGGCCGAAATGGA
ATCTGGAACCAGACCGGTACGAATATGAACAGGAACTCTCAGACGCGATGCATCCAGATTTTGCTTTTTGGCAAAGAGAG
CACTTTCTCGTTGCCCCGGAAGAGCTTGCCAAGGGGACGGAAGGGATTGATGCGTCAATTATTTCGCCAGCAGAGAAACT
AATGTTTGTAACAACCAGGTTTCCTTCACTTCATTCGCCTGTGGTTGTTAACTCCGGTGCAAGGCAGGACGACTCCTTTT
TTTATGTACCGCATACTCCACTCGGCATAAGCAACTGTTTCGATCTTTTCGTCAGTCGACGTGACAATCCGGTCGGGTAT
GAAAAAGCTGTGCAGAAAATCATCGAACATTGGCGAAAGATCAACGACTCAACAAATGTGTCTTCGTTAGGCCGAAGCCG
TGCTGTCACCGATCAATGGGATGAAGAACTCAACAAACCTTTTGGGCAATCCCTCAACGATATGGATTCGTGTATCTCGG
CAGATTACGCCTGGATTGTGATTTACCCGATGCCTGACAACTCTAGATTGATGCCCATGTTTTACATGCACGGGGAGGAA
GGTGGTGCGTATCTGGTACCCCTGGATGCTCGCAACCTCGACCTCTTTCGGGATGCCATCTGGCTAGACGAAACCCGCCA
CATGAGCGTTTTCGATCGCATCAAGGAATTGCTCGGCTATCTACCGGGGACACCCAAGAGCATCGAGGACGGACTGCGCC
GGACGGCACCTTGGTTTGATTACAACCCTTTTTACAAGATGCGAGACGAAAAGAAGGAAGACCTCCGTCTACTCGGCAAT
TTCTGTCAACAGTACTGGGGAAACAGTACCCAGGAACCCTCGCATCAAGGAGACTCAAAATGA

Upstream 100 bases:

>100_bases
GGCCTTGCTAGACACCTATGCCGTGGTTTCCGACTCCGGATCGGTTATCACCGTCGGACACCGCTTTAAGCGCGTTTGCC
ACTGAGCAAGGAGAAACACA

Downstream 100 bases:

>100_bases
GCGCACCGAAAACCTTTTGGCGTCTACACATCGAAAGCGATGCAGCCTACCGCACCATGATAGAGACCTCGACGGCGATC
CCGCCGGATAAAGAATTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MKNIEKVATQIADRVIAGIKPENEFQRRILESDQARETEGKDALSALRRLGGKKLHLGEEAILARRLYNEIRVLKHHLRA
KKSSLGRFCIDAGISDASQSSKELHRLILAPGKNPNEVRLRRTADKYHRLIVAISKTTKESSSTLADRVLRGTSLHPEKN
VGNLSETEMVQTALQGIVDRIDGEFGIFAKYMDISELKARHIASGGKENWPKWNLEPDRYEYEQELSDAMHPDFAFWQRE
HFLVAPEELAKGTEGIDASIISPAEKLMFVTTRFPSLHSPVVVNSGARQDDSFFYVPHTPLGISNCFDLFVSRRDNPVGY
EKAVQKIIEHWRKINDSTNVSSLGRSRAVTDQWDEELNKPFGQSLNDMDSCISADYAWIVIYPMPDNSRLMPMFYMHGEE
GGAYLVPLDARNLDLFRDAIWLDETRHMSVFDRIKELLGYLPGTPKSIEDGLRRTAPWFDYNPFYKMRDEKKEDLRLLGN
FCQQYWGNSTQEPSHQGDSK

Sequences:

>Translated_500_residues
MKNIEKVATQIADRVIAGIKPENEFQRRILESDQARETEGKDALSALRRLGGKKLHLGEEAILARRLYNEIRVLKHHLRA
KKSSLGRFCIDAGISDASQSSKELHRLILAPGKNPNEVRLRRTADKYHRLIVAISKTTKESSSTLADRVLRGTSLHPEKN
VGNLSETEMVQTALQGIVDRIDGEFGIFAKYMDISELKARHIASGGKENWPKWNLEPDRYEYEQELSDAMHPDFAFWQRE
HFLVAPEELAKGTEGIDASIISPAEKLMFVTTRFPSLHSPVVVNSGARQDDSFFYVPHTPLGISNCFDLFVSRRDNPVGY
EKAVQKIIEHWRKINDSTNVSSLGRSRAVTDQWDEELNKPFGQSLNDMDSCISADYAWIVIYPMPDNSRLMPMFYMHGEE
GGAYLVPLDARNLDLFRDAIWLDETRHMSVFDRIKELLGYLPGTPKSIEDGLRRTAPWFDYNPFYKMRDEKKEDLRLLGN
FCQQYWGNSTQEPSHQGDSK
>Mature_500_residues
MKNIEKVATQIADRVIAGIKPENEFQRRILESDQARETEGKDALSALRRLGGKKLHLGEEAILARRLYNEIRVLKHHLRA
KKSSLGRFCIDAGISDASQSSKELHRLILAPGKNPNEVRLRRTADKYHRLIVAISKTTKESSSTLADRVLRGTSLHPEKN
VGNLSETEMVQTALQGIVDRIDGEFGIFAKYMDISELKARHIASGGKENWPKWNLEPDRYEYEQELSDAMHPDFAFWQRE
HFLVAPEELAKGTEGIDASIISPAEKLMFVTTRFPSLHSPVVVNSGARQDDSFFYVPHTPLGISNCFDLFVSRRDNPVGY
EKAVQKIIEHWRKINDSTNVSSLGRSRAVTDQWDEELNKPFGQSLNDMDSCISADYAWIVIYPMPDNSRLMPMFYMHGEE
GGAYLVPLDARNLDLFRDAIWLDETRHMSVFDRIKELLGYLPGTPKSIEDGLRRTAPWFDYNPFYKMRDEKKEDLRLLGN
FCQQYWGNSTQEPSHQGDSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57174; Mature: 57174

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIEKVATQIADRVIAGIKPENEFQRRILESDQARETEGKDALSALRRLGGKKLHLGEE
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCEEECCHH
AILARRLYNEIRVLKHHLRAKKSSLGRFCIDAGISDASQSSKELHRLILAPGKNPNEVRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
RRTADKYHRLIVAISKTTKESSSTLADRVLRGTSLHPEKNVGNLSETEMVQTALQGIVDR
HHHHHHHHHHHHEEEHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
IDGEFGIFAKYMDISELKARHIASGGKENWPKWNLEPDRYEYEQELSDAMHPDFAFWQRE
HCCCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCC
HFLVAPEELAKGTEGIDASIISPAEKLMFVTTRFPSLHSPVVVNSGARQDDSFFYVPHTP
CEEECHHHHCCCCCCCCCHHCCHHHHHEEEEECCCCCCCCEEECCCCCCCCCEEECCCCC
LGISNCFDLFVSRRDNPVGYEKAVQKIIEHWRKINDSTNVSSLGRSRAVTDQWDEELNKP
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHCCH
FGQSLNDMDSCISADYAWIVIYPMPDNSRLMPMFYMHGEEGGAYLVPLDARNLDLFRDAI
HCCCHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHH
WLDETRHMSVFDRIKELLGYLPGTPKSIEDGLRRTAPWFDYNPFYKMRDEKKEDLRLLGN
HHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHH
FCQQYWGNSTQEPSHQGDSK
HHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKNIEKVATQIADRVIAGIKPENEFQRRILESDQARETEGKDALSALRRLGGKKLHLGEE
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCEEECCHH
AILARRLYNEIRVLKHHLRAKKSSLGRFCIDAGISDASQSSKELHRLILAPGKNPNEVRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
RRTADKYHRLIVAISKTTKESSSTLADRVLRGTSLHPEKNVGNLSETEMVQTALQGIVDR
HHHHHHHHHHHHEEEHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
IDGEFGIFAKYMDISELKARHIASGGKENWPKWNLEPDRYEYEQELSDAMHPDFAFWQRE
HCCCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCC
HFLVAPEELAKGTEGIDASIISPAEKLMFVTTRFPSLHSPVVVNSGARQDDSFFYVPHTP
CEEECHHHHCCCCCCCCCHHCCHHHHHEEEEECCCCCCCCEEECCCCCCCCCEEECCCCC
LGISNCFDLFVSRRDNPVGYEKAVQKIIEHWRKINDSTNVSSLGRSRAVTDQWDEELNKP
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHCCH
FGQSLNDMDSCISADYAWIVIYPMPDNSRLMPMFYMHGEEGGAYLVPLDARNLDLFRDAI
HCCCHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHH
WLDETRHMSVFDRIKELLGYLPGTPKSIEDGLRRTAPWFDYNPFYKMRDEKKEDLRLLGN
HHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHH
FCQQYWGNSTQEPSHQGDSK
HHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA