| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906997
Identifier: 71906997
GI number: 71906997
Start: 1487479
End: 1488981
Strand: Reverse
Name: 71906997
Synonym: Daro_1365
Alternate gene names: NA
Gene position: 1488981-1487479 (Counterclockwise)
Preceding gene: 71906998
Following gene: 71906996
Centisome position: 33.08
GC content: 50.9
Gene sequence:
>1503_bases ATGAAAAATATCGAAAAAGTCGCTACTCAGATTGCTGATCGCGTAATCGCTGGTATCAAGCCAGAAAACGAATTTCAGCG GCGGATACTGGAGTCCGATCAAGCGAGAGAAACAGAAGGCAAGGACGCGTTGAGCGCACTGCGTCGTTTGGGGGGGAAGA AGCTTCACTTGGGCGAGGAAGCCATCCTGGCTAGGCGCCTTTACAACGAAATCCGGGTTTTAAAGCATCACCTGCGCGCA AAAAAAAGCAGTCTCGGAAGATTTTGCATTGACGCCGGAATATCCGATGCCAGCCAATCGTCAAAGGAGCTGCACCGCCT AATTCTGGCTCCTGGCAAGAACCCGAATGAAGTCCGCCTGCGCCGGACCGCCGACAAGTACCACCGGTTAATCGTGGCGA TTAGCAAGACCACCAAGGAAAGCTCTAGCACGCTGGCCGACCGGGTACTGCGTGGCACCAGCCTACACCCGGAAAAAAAC GTGGGGAATCTGAGTGAAACCGAAATGGTGCAAACCGCATTGCAAGGAATAGTCGACCGGATCGACGGCGAATTCGGCAT ATTTGCCAAGTACATGGATATCTCGGAGTTGAAAGCCAGACACATTGCGAGTGGCGGCAAAGAAAACTGGCCGAAATGGA ATCTGGAACCAGACCGGTACGAATATGAACAGGAACTCTCAGACGCGATGCATCCAGATTTTGCTTTTTGGCAAAGAGAG CACTTTCTCGTTGCCCCGGAAGAGCTTGCCAAGGGGACGGAAGGGATTGATGCGTCAATTATTTCGCCAGCAGAGAAACT AATGTTTGTAACAACCAGGTTTCCTTCACTTCATTCGCCTGTGGTTGTTAACTCCGGTGCAAGGCAGGACGACTCCTTTT TTTATGTACCGCATACTCCACTCGGCATAAGCAACTGTTTCGATCTTTTCGTCAGTCGACGTGACAATCCGGTCGGGTAT GAAAAAGCTGTGCAGAAAATCATCGAACATTGGCGAAAGATCAACGACTCAACAAATGTGTCTTCGTTAGGCCGAAGCCG TGCTGTCACCGATCAATGGGATGAAGAACTCAACAAACCTTTTGGGCAATCCCTCAACGATATGGATTCGTGTATCTCGG CAGATTACGCCTGGATTGTGATTTACCCGATGCCTGACAACTCTAGATTGATGCCCATGTTTTACATGCACGGGGAGGAA GGTGGTGCGTATCTGGTACCCCTGGATGCTCGCAACCTCGACCTCTTTCGGGATGCCATCTGGCTAGACGAAACCCGCCA CATGAGCGTTTTCGATCGCATCAAGGAATTGCTCGGCTATCTACCGGGGACACCCAAGAGCATCGAGGACGGACTGCGCC GGACGGCACCTTGGTTTGATTACAACCCTTTTTACAAGATGCGAGACGAAAAGAAGGAAGACCTCCGTCTACTCGGCAAT TTCTGTCAACAGTACTGGGGAAACAGTACCCAGGAACCCTCGCATCAAGGAGACTCAAAATGA
Upstream 100 bases:
>100_bases GGCCTTGCTAGACACCTATGCCGTGGTTTCCGACTCCGGATCGGTTATCACCGTCGGACACCGCTTTAAGCGCGTTTGCC ACTGAGCAAGGAGAAACACA
Downstream 100 bases:
>100_bases GCGCACCGAAAACCTTTTGGCGTCTACACATCGAAAGCGATGCAGCCTACCGCACCATGATAGAGACCTCGACGGCGATC CCGCCGGATAAAGAATTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MKNIEKVATQIADRVIAGIKPENEFQRRILESDQARETEGKDALSALRRLGGKKLHLGEEAILARRLYNEIRVLKHHLRA KKSSLGRFCIDAGISDASQSSKELHRLILAPGKNPNEVRLRRTADKYHRLIVAISKTTKESSSTLADRVLRGTSLHPEKN VGNLSETEMVQTALQGIVDRIDGEFGIFAKYMDISELKARHIASGGKENWPKWNLEPDRYEYEQELSDAMHPDFAFWQRE HFLVAPEELAKGTEGIDASIISPAEKLMFVTTRFPSLHSPVVVNSGARQDDSFFYVPHTPLGISNCFDLFVSRRDNPVGY EKAVQKIIEHWRKINDSTNVSSLGRSRAVTDQWDEELNKPFGQSLNDMDSCISADYAWIVIYPMPDNSRLMPMFYMHGEE GGAYLVPLDARNLDLFRDAIWLDETRHMSVFDRIKELLGYLPGTPKSIEDGLRRTAPWFDYNPFYKMRDEKKEDLRLLGN FCQQYWGNSTQEPSHQGDSK
Sequences:
>Translated_500_residues MKNIEKVATQIADRVIAGIKPENEFQRRILESDQARETEGKDALSALRRLGGKKLHLGEEAILARRLYNEIRVLKHHLRA KKSSLGRFCIDAGISDASQSSKELHRLILAPGKNPNEVRLRRTADKYHRLIVAISKTTKESSSTLADRVLRGTSLHPEKN VGNLSETEMVQTALQGIVDRIDGEFGIFAKYMDISELKARHIASGGKENWPKWNLEPDRYEYEQELSDAMHPDFAFWQRE HFLVAPEELAKGTEGIDASIISPAEKLMFVTTRFPSLHSPVVVNSGARQDDSFFYVPHTPLGISNCFDLFVSRRDNPVGY EKAVQKIIEHWRKINDSTNVSSLGRSRAVTDQWDEELNKPFGQSLNDMDSCISADYAWIVIYPMPDNSRLMPMFYMHGEE GGAYLVPLDARNLDLFRDAIWLDETRHMSVFDRIKELLGYLPGTPKSIEDGLRRTAPWFDYNPFYKMRDEKKEDLRLLGN FCQQYWGNSTQEPSHQGDSK >Mature_500_residues MKNIEKVATQIADRVIAGIKPENEFQRRILESDQARETEGKDALSALRRLGGKKLHLGEEAILARRLYNEIRVLKHHLRA KKSSLGRFCIDAGISDASQSSKELHRLILAPGKNPNEVRLRRTADKYHRLIVAISKTTKESSSTLADRVLRGTSLHPEKN VGNLSETEMVQTALQGIVDRIDGEFGIFAKYMDISELKARHIASGGKENWPKWNLEPDRYEYEQELSDAMHPDFAFWQRE HFLVAPEELAKGTEGIDASIISPAEKLMFVTTRFPSLHSPVVVNSGARQDDSFFYVPHTPLGISNCFDLFVSRRDNPVGY EKAVQKIIEHWRKINDSTNVSSLGRSRAVTDQWDEELNKPFGQSLNDMDSCISADYAWIVIYPMPDNSRLMPMFYMHGEE GGAYLVPLDARNLDLFRDAIWLDETRHMSVFDRIKELLGYLPGTPKSIEDGLRRTAPWFDYNPFYKMRDEKKEDLRLLGN FCQQYWGNSTQEPSHQGDSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57174; Mature: 57174
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIEKVATQIADRVIAGIKPENEFQRRILESDQARETEGKDALSALRRLGGKKLHLGEE CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCEEECCHH AILARRLYNEIRVLKHHLRAKKSSLGRFCIDAGISDASQSSKELHRLILAPGKNPNEVRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHH RRTADKYHRLIVAISKTTKESSSTLADRVLRGTSLHPEKNVGNLSETEMVQTALQGIVDR HHHHHHHHHHHHEEEHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH IDGEFGIFAKYMDISELKARHIASGGKENWPKWNLEPDRYEYEQELSDAMHPDFAFWQRE HCCCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCC HFLVAPEELAKGTEGIDASIISPAEKLMFVTTRFPSLHSPVVVNSGARQDDSFFYVPHTP CEEECHHHHCCCCCCCCCHHCCHHHHHEEEEECCCCCCCCEEECCCCCCCCCEEECCCCC LGISNCFDLFVSRRDNPVGYEKAVQKIIEHWRKINDSTNVSSLGRSRAVTDQWDEELNKP CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHCCH FGQSLNDMDSCISADYAWIVIYPMPDNSRLMPMFYMHGEEGGAYLVPLDARNLDLFRDAI HCCCHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHH WLDETRHMSVFDRIKELLGYLPGTPKSIEDGLRRTAPWFDYNPFYKMRDEKKEDLRLLGN HHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHH FCQQYWGNSTQEPSHQGDSK HHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKNIEKVATQIADRVIAGIKPENEFQRRILESDQARETEGKDALSALRRLGGKKLHLGEE CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCCEEECCHH AILARRLYNEIRVLKHHLRAKKSSLGRFCIDAGISDASQSSKELHRLILAPGKNPNEVRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHH RRTADKYHRLIVAISKTTKESSSTLADRVLRGTSLHPEKNVGNLSETEMVQTALQGIVDR HHHHHHHHHHHHEEEHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH IDGEFGIFAKYMDISELKARHIASGGKENWPKWNLEPDRYEYEQELSDAMHPDFAFWQRE HCCCCCHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCC HFLVAPEELAKGTEGIDASIISPAEKLMFVTTRFPSLHSPVVVNSGARQDDSFFYVPHTP CEEECHHHHCCCCCCCCCHHCCHHHHHEEEEECCCCCCCCEEECCCCCCCCCEEECCCCC LGISNCFDLFVSRRDNPVGYEKAVQKIIEHWRKINDSTNVSSLGRSRAVTDQWDEELNKP CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHCCH FGQSLNDMDSCISADYAWIVIYPMPDNSRLMPMFYMHGEEGGAYLVPLDARNLDLFRDAI HCCCHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHH WLDETRHMSVFDRIKELLGYLPGTPKSIEDGLRRTAPWFDYNPFYKMRDEKKEDLRLLGN HHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHH FCQQYWGNSTQEPSHQGDSK HHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA