| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906752
Identifier: 71906752
GI number: 71906752
Start: 1216662
End: 1217207
Strand: Reverse
Name: 71906752
Synonym: Daro_1113
Alternate gene names: NA
Gene position: 1217207-1216662 (Counterclockwise)
Preceding gene: 71906753
Following gene: 71906751
Centisome position: 27.04
GC content: 60.44
Gene sequence:
>546_bases ATGTTGTCCACCAAAAAACTTATCTCCGCTCTGGCGCTTTCTGCAGCCCTGGCCGGCCCCGCCCTGGCCATCGAATACCC GATCGGCGTGCCGCAGCAGCGCAACGGCATGGAGATCGCCGCCGTCTATCTGCAACCGGTTGAAATGGAACCGGAAGGCA TGATGAAGAAAGCGAGCGATTCCGACATCCACCTCGAAGCCGACATTCACGCCCTGGCCAACAACCCGAACGGTTTCGAG GAAGGGGCCTGGATGCCCTACCTGGCGATCAAGTTCGAAGTTTCCAAGATCGGCGGCGACTTCAAGGTGAGCGGCGATTT CATGCCGATGGTCGCCAACGACGGTCCGCACTACGGCGACAACGTCAAACTGGCCGGCCCCGGCAAGTACAAGGTGAAGT ACACCATCCTGCCGCCGTCGGCCAACCCGCACTCCCATTTCGGCCGCCACACCGACCGCGCCACCGGCGTTCGCCCGTGG TTCAAGCCGTTTGAAGTCGAGTACGAATTCACCTACGTCGGCATCGGCAAAAAGGGCGGTTACTAA
Upstream 100 bases:
>100_bases TTTAACCATCCTCAAGCCAGCCAGCCCGACGCCAGCCAGCTATTTCGGATAGCCCACCGCGTTGTGGTCAGCGAGCCAGA GACTTTCAGGAGTCAATGCC
Downstream 100 bases:
>100_bases GCATGCAACTTGCCAAACTGACCGCTGCGCTGGTCGCGGCGGGGCTGGCCCTGCCTGCCCTCGCCGCACCTGACGCAGCA ACGCTGCAAAAACTGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MLSTKKLISALALSAALAGPALAIEYPIGVPQQRNGMEIAAVYLQPVEMEPEGMMKKASDSDIHLEADIHALANNPNGFE EGAWMPYLAIKFEVSKIGGDFKVSGDFMPMVANDGPHYGDNVKLAGPGKYKVKYTILPPSANPHSHFGRHTDRATGVRPW FKPFEVEYEFTYVGIGKKGGY
Sequences:
>Translated_181_residues MLSTKKLISALALSAALAGPALAIEYPIGVPQQRNGMEIAAVYLQPVEMEPEGMMKKASDSDIHLEADIHALANNPNGFE EGAWMPYLAIKFEVSKIGGDFKVSGDFMPMVANDGPHYGDNVKLAGPGKYKVKYTILPPSANPHSHFGRHTDRATGVRPW FKPFEVEYEFTYVGIGKKGGY >Mature_181_residues MLSTKKLISALALSAALAGPALAIEYPIGVPQQRNGMEIAAVYLQPVEMEPEGMMKKASDSDIHLEADIHALANNPNGFE EGAWMPYLAIKFEVSKIGGDFKVSGDFMPMVANDGPHYGDNVKLAGPGKYKVKYTILPPSANPHSHFGRHTDRATGVRPW FKPFEVEYEFTYVGIGKKGGY
Specific function: Unknown
COG id: COG3470
COG function: function code P; Uncharacterized protein probably involved in high-affinity Fe2+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0423 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018470 [H]
Pfam domain/function: PF10634 Iron_transport [H]
EC number: NA
Molecular weight: Translated: 19742; Mature: 19742
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTKKLISALALSAALAGPALAIEYPIGVPQQRNGMEIAAVYLQPVEMEPEGMMKKASD CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCHHHHCCCC SDIHLEADIHALANNPNGFEEGAWMPYLAIKFEVSKIGGDFKVSGDFMPMVANDGPHYGD CCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCEEECCCEEEEEECCCCCCCC NVKLAGPGKYKVKYTILPPSANPHSHFGRHTDRATGVRPWFKPFEVEYEFTYVGIGKKGG CEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCC Y C >Mature Secondary Structure MLSTKKLISALALSAALAGPALAIEYPIGVPQQRNGMEIAAVYLQPVEMEPEGMMKKASD CCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCHHHHCCCC SDIHLEADIHALANNPNGFEEGAWMPYLAIKFEVSKIGGDFKVSGDFMPMVANDGPHYGD CCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCEEECCCEEEEEECCCCCCCC NVKLAGPGKYKVKYTILPPSANPHSHFGRHTDRATGVRPWFKPFEVEYEFTYVGIGKKGG CEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCC Y C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12271122 [H]