| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is efeU [H]
Identifier: 71906749
GI number: 71906749
Start: 1214014
End: 1214817
Strand: Reverse
Name: efeU [H]
Synonym: Daro_1110
Alternate gene names: 71906749
Gene position: 1214817-1214014 (Counterclockwise)
Preceding gene: 71906750
Following gene: 71906748
Centisome position: 26.99
GC content: 65.67
Gene sequence:
>804_bases ATGGGTAACGCATTTTTTGTCGTCTGGCGCGAGAGCCTCGAAGCCTTCCTGATCGCCGGCATCCTTTACGCTTGGCTCAA GGCCAATGACGACAGCGGCAGCGGCAAGCGCGCACTGTTTCTCGGACTGGCAGCCGGTGTCGGGCTGGCGCTGCTTCTCG GCTGGGCGCTGCTCGGCGTGCAGGACGGACTGAGCGGCGATGCGCTGGAAATCTTCCAGACTGCAACGCTGTTCGTCGCC GCCGGACTGATTACCCAGATGGTGCTGTGGATGAAGAAAAATGGCCGGCAGATGAAGGCCATGCTGCATGCCGAACTGAG CAGCGCGGCCGAACGTTCCGGTCACCTCGGCGTCGCCGTGGTGGCGGCACTGGCCGTGGCCCGCGAAGGGGCCGAAACGG TCATCTTCCTCTACGGACTGGCCCAGGGCGGCGAAATGCAGGCGCTGGCCTTTGGCTGCTTCTTCGGCCTTGCCGCCGCC GGGCTGACCGCCTGGCTGGCGGCACGCAGCCTGGCCAAACTCAACATTGCCCTGCTGCTCCGCCTGTCGTCCATCCTGCT GCTCGTCCTGGCTTCAGCCCTGCTCCTTTCCGGCATCGACCGGATGATCGGTGCCGGCTGGCTGCCGCCACTGCTCGACC CGGTGTGGGATACCTCCATGCTGCTCGACGACACCACCAAGGGCGGCAAGATTCTGGCCGATTTCACCGGCTACCGCGCC CGCCCGGCCCTCAGCGATCTGCTCGCCTGGGCCTGCTACTGGGGGGTTGTCATCGTCGCCCAACGGAGAATCGCCCGTGG CTGA
Upstream 100 bases:
>100_bases GAAACCCGGCAGCTACAAGTTCTTTGACGATTTCCACCCGGAAACCGGGCAAGGCAAGATCGTCGCCAAATAACGATAAC GAACCGCAACGGAGCACAGC
Downstream 100 bases:
>100_bases ACACGTCATCCAGTTCCACGCCAAGGCCGAGACTAGCCGCATTGCGCGGATCGGTCTCTTTCTGCGTAAAAACCGCCGAC TGATCATCGCCATTCAATGG
Product: Iron permease FTR1
Products: NA
Alternate protein names: Fe(2+) ion permease efeU; Ferrous iron uptake protein [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MGNAFFVVWRESLEAFLIAGILYAWLKANDDSGSGKRALFLGLAAGVGLALLLGWALLGVQDGLSGDALEIFQTATLFVA AGLITQMVLWMKKNGRQMKAMLHAELSSAAERSGHLGVAVVAALAVAREGAETVIFLYGLAQGGEMQALAFGCFFGLAAA GLTAWLAARSLAKLNIALLLRLSSILLLVLASALLLSGIDRMIGAGWLPPLLDPVWDTSMLLDDTTKGGKILADFTGYRA RPALSDLLAWACYWGVVIVAQRRIARG
Sequences:
>Translated_267_residues MGNAFFVVWRESLEAFLIAGILYAWLKANDDSGSGKRALFLGLAAGVGLALLLGWALLGVQDGLSGDALEIFQTATLFVA AGLITQMVLWMKKNGRQMKAMLHAELSSAAERSGHLGVAVVAALAVAREGAETVIFLYGLAQGGEMQALAFGCFFGLAAA GLTAWLAARSLAKLNIALLLRLSSILLLVLASALLLSGIDRMIGAGWLPPLLDPVWDTSMLLDDTTKGGKILADFTGYRA RPALSDLLAWACYWGVVIVAQRRIARG >Mature_266_residues GNAFFVVWRESLEAFLIAGILYAWLKANDDSGSGKRALFLGLAAGVGLALLLGWALLGVQDGLSGDALEIFQTATLFVAA GLITQMVLWMKKNGRQMKAMLHAELSSAAERSGHLGVAVVAALAVAREGAETVIFLYGLAQGGEMQALAFGCFFGLAAAG LTAWLAARSLAKLNIALLLRLSSILLLVLASALLLSGIDRMIGAGWLPPLLDPVWDTSMLLDDTTKGGKILADFTGYRAR PALSDLLAWACYWGVVIVAQRRIARG
Specific function: Functions only as an uptake system for Fe(2+) ion acquisition [H]
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005217 - InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 28234; Mature: 28103
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNAFFVVWRESLEAFLIAGILYAWLKANDDSGSGKRALFLGLAAGVGLALLLGWALLGV CCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QDGLSGDALEIFQTATLFVAAGLITQMVLWMKKNGRQMKAMLHAELSSAAERSGHLGVAV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH VAALAVAREGAETVIFLYGLAQGGEMQALAFGCFFGLAAAGLTAWLAARSLAKLNIALLL HHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSSILLLVLASALLLSGIDRMIGAGWLPPLLDPVWDTSMLLDDTTKGGKILADFTGYRA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHCCCCCCCCEEEEECCCCCC RPALSDLLAWACYWGVVIVAQRRIARG CHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GNAFFVVWRESLEAFLIAGILYAWLKANDDSGSGKRALFLGLAAGVGLALLLGWALLGV CCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QDGLSGDALEIFQTATLFVAAGLITQMVLWMKKNGRQMKAMLHAELSSAAERSGHLGVAV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHH VAALAVAREGAETVIFLYGLAQGGEMQALAFGCFFGLAAAGLTAWLAARSLAKLNIALLL HHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSSILLLVLASALLLSGIDRMIGAGWLPPLLDPVWDTSMLLDDTTKGGKILADFTGYRA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHCCCCCCCCEEEEECCCCCC RPALSDLLAWACYWGVVIVAQRRIARG CHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]