Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is kdpA

Identifier: 71906726

GI number: 71906726

Start: 1191415

End: 1193193

Strand: Reverse

Name: kdpA

Synonym: Daro_1087

Alternate gene names: 71906726

Gene position: 1193193-1191415 (Counterclockwise)

Preceding gene: 71906727

Following gene: 71906725

Centisome position: 26.51

GC content: 61.61

Gene sequence:

>1779_bases
ATGAGCAATCATGCCTGGATTCTGCTCGGGATTTTTCTTGTTGTCCTGTTACTGACCGTCAAACCGTTGGGGACTTACAT
CGCTAACGTGATGGAAGGTCGCTTCCGTCTGGCCGGCAAGATCGAAAGCCCGATCTATCGTCTGTGCGGCATCCGTCCGG
ACGAGGAAATGGGCTGGCTGAAGTATGCCTGCGCCATCCTGCTTTTCAATGTGCTTGGTGTCTTGGCCGTTTATGCCCTG
CAACGTTTGCAGGCCGAGCTGCCGCTCAATCCGCAGGTTTTCCCGGCGGTCAGCCCGGACTCCGCCTTCAACACGGCGAT
CAGCTTCGCCACCAATACCAACTGGCAAGGCTACGTCGGCGAAGCGACGATGAGCTATCTGACGCAGATGCTGGCTCTCG
CCGTACAGAATTTCTTCTCGGCCGCCACCGGCATCGTTGTCGTCATTGCGCTGATCCGCGGTTTCGCCCGCCATACGGCC
AAGACCTTCGGCAACGCCTGGGTCGACCTGACCCGCATCACGCTGCACGTGCTGCTGCCGATTTCGATCATCTATGCGGT
TTTCCTGACTGGCCAGGGCGTCATCCAGAATTTCAATGCCTACAAGGACGTGACGACGCTGGAAGTAACCAGCTTTGACA
ATCCGAAGCTTGATGATGCAGGTCAGCCGCTGAAGGACGACAAGGGCGCCGTCGTGACCGAACCGGCGCAGACGCAAACC
CAGACGCTGGCCATGGGCCCGGTTGCTTCGCAGGAAGCGATCAAGATGCTTGGCACCAACGGCGGCGGCTTCATGAACGC
CAACTCGGCGCATCCCTACGAGAACCCGACGCCGCTGAGCAACTTTATCCAGATGCTGTCGATCTTCCTGATCCCCGCCG
CGCTGTGCTTCACCTTCGGTCGTATCGTCGGCGATACGCGCCAGGGCTGGGCGGTGCTCGCGGCAATGACGCTGATGTTC
GTCGCCCTGGCTTATACGGCGATGCATTTCGAACAGCAGGCCAATCCGCTGCTGACCCAGCTGGGCGTCGATCCGGCATC
CGGCAACATGGAAGGCAAGGAAACCCGCTTCGGCATTGGCGATTCCGGCCTGTTCGCCACGATCACGACACTCGCCTCCT
GTGGCGCAGTCAACGCCATGCACGATTCGTTTACGCCGCTCGGCGGCCTGGTGCCGCTGATCGACATGCAGCTCGGCGAA
GTCGTCTTCGGCGGCGTCGGTACCGGCCTCTATGGCATGCTGGTCTTCGCCATCATGGCCGTCTTCATCGCCGGTCTGAT
GATCGGCCGGACGCCGGAATACCTGGGCAAGAAGATTGAAGCCTTCGAGATGAAGATGGTGTCCATCGCCATCCTGGTCA
CACCGCTGCTGGTGCTGGTCGGCACCGCCATCGCGGTCATGCTTGCCGACGGCAAGGCCGGTATCGCCAACCCGGGCGCC
CACGGCTTCTCGGAAATCCTTTATGCCTTCACCTCGGCCGCCAATAACAACGGCAGCGCCTTCGCCGGGCTGTCCGCCAA
CACGCCGTTCTACAACGTGATGCTGGGCATCGCCATGTGGTTCGGCCGCTTCGGCGTAATCGTGCCGGTACTCGCCATCG
CCGGTTCGCTGGCCGCCAAGAAGCGCATTGCCGTCGGCGCCGGCACCCTGCCGACCCATGGCCCGCTGTTCGTCACGCTG
CTGATCGGCACCGTGCTGCTGGTCGGCCTCCTGAACTACGTCCCGGCGCTGGCCCTTGGCCCCGTCATCGAGCACCTGGT
GCTCTGGGCCGCTCACTAA

Upstream 100 bases:

>100_bases
GGGGGTGCCAAATGACCTGGCTTTTCATTCTCAGCGGCGCTGTCGCCGCCGGCCTGCTGGTCTATCTGATTGCAGCGCTT
ATTAATCCGGAGGACTTCTC

Downstream 100 bases:

>100_bases
GCGCTTGGGGAGAAAACCATGACACGCAAGACTTTTACCCTGTTCGATCCGACGCTGGCCCTGCCGGCGATCGCCGATGC
TTTCCGGAAACTGAATCCGG

Product: potassium-transporting ATPase subunit A

Products: NA

Alternate protein names: ATP phosphohydrolase [potassium-transporting] A chain; Potassium-binding and translocating subunit A; Potassium-translocating ATPase A chain

Number of amino acids: Translated: 592; Mature: 591

Protein sequence:

>592_residues
MSNHAWILLGIFLVVLLLTVKPLGTYIANVMEGRFRLAGKIESPIYRLCGIRPDEEMGWLKYACAILLFNVLGVLAVYAL
QRLQAELPLNPQVFPAVSPDSAFNTAISFATNTNWQGYVGEATMSYLTQMLALAVQNFFSAATGIVVVIALIRGFARHTA
KTFGNAWVDLTRITLHVLLPISIIYAVFLTGQGVIQNFNAYKDVTTLEVTSFDNPKLDDAGQPLKDDKGAVVTEPAQTQT
QTLAMGPVASQEAIKMLGTNGGGFMNANSAHPYENPTPLSNFIQMLSIFLIPAALCFTFGRIVGDTRQGWAVLAAMTLMF
VALAYTAMHFEQQANPLLTQLGVDPASGNMEGKETRFGIGDSGLFATITTLASCGAVNAMHDSFTPLGGLVPLIDMQLGE
VVFGGVGTGLYGMLVFAIMAVFIAGLMIGRTPEYLGKKIEAFEMKMVSIAILVTPLLVLVGTAIAVMLADGKAGIANPGA
HGFSEILYAFTSAANNNGSAFAGLSANTPFYNVMLGIAMWFGRFGVIVPVLAIAGSLAAKKRIAVGAGTLPTHGPLFVTL
LIGTVLLVGLLNYVPALALGPVIEHLVLWAAH

Sequences:

>Translated_592_residues
MSNHAWILLGIFLVVLLLTVKPLGTYIANVMEGRFRLAGKIESPIYRLCGIRPDEEMGWLKYACAILLFNVLGVLAVYAL
QRLQAELPLNPQVFPAVSPDSAFNTAISFATNTNWQGYVGEATMSYLTQMLALAVQNFFSAATGIVVVIALIRGFARHTA
KTFGNAWVDLTRITLHVLLPISIIYAVFLTGQGVIQNFNAYKDVTTLEVTSFDNPKLDDAGQPLKDDKGAVVTEPAQTQT
QTLAMGPVASQEAIKMLGTNGGGFMNANSAHPYENPTPLSNFIQMLSIFLIPAALCFTFGRIVGDTRQGWAVLAAMTLMF
VALAYTAMHFEQQANPLLTQLGVDPASGNMEGKETRFGIGDSGLFATITTLASCGAVNAMHDSFTPLGGLVPLIDMQLGE
VVFGGVGTGLYGMLVFAIMAVFIAGLMIGRTPEYLGKKIEAFEMKMVSIAILVTPLLVLVGTAIAVMLADGKAGIANPGA
HGFSEILYAFTSAANNNGSAFAGLSANTPFYNVMLGIAMWFGRFGVIVPVLAIAGSLAAKKRIAVGAGTLPTHGPLFVTL
LIGTVLLVGLLNYVPALALGPVIEHLVLWAAH
>Mature_591_residues
SNHAWILLGIFLVVLLLTVKPLGTYIANVMEGRFRLAGKIESPIYRLCGIRPDEEMGWLKYACAILLFNVLGVLAVYALQ
RLQAELPLNPQVFPAVSPDSAFNTAISFATNTNWQGYVGEATMSYLTQMLALAVQNFFSAATGIVVVIALIRGFARHTAK
TFGNAWVDLTRITLHVLLPISIIYAVFLTGQGVIQNFNAYKDVTTLEVTSFDNPKLDDAGQPLKDDKGAVVTEPAQTQTQ
TLAMGPVASQEAIKMLGTNGGGFMNANSAHPYENPTPLSNFIQMLSIFLIPAALCFTFGRIVGDTRQGWAVLAAMTLMFV
ALAYTAMHFEQQANPLLTQLGVDPASGNMEGKETRFGIGDSGLFATITTLASCGAVNAMHDSFTPLGGLVPLIDMQLGEV
VFGGVGTGLYGMLVFAIMAVFIAGLMIGRTPEYLGKKIEAFEMKMVSIAILVTPLLVLVGTAIAVMLADGKAGIANPGAH
GFSEILYAFTSAANNNGSAFAGLSANTPFYNVMLGIAMWFGRFGVIVPVLAIAGSLAAKKRIAVGAGTLPTHGPLFVTLL
IGTVLLVGLLNYVPALALGPVIEHLVLWAAH

Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions

COG id: COG2060

COG function: function code P; K+-transporting ATPase, A chain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdpA family

Homologues:

Organism=Escherichia coli, GI1786915, Length=588, Percent_Identity=57.6530612244898, Blast_Score=647, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATKA_DECAR (Q47H38)

Other databases:

- EMBL:   CP000089
- RefSeq:   YP_284313.1
- STRING:   Q47H38
- GeneID:   3569924
- GenomeReviews:   CP000089_GR
- KEGG:   dar:Daro_1087
- NMPDR:   fig|159087.4.peg.1644
- eggNOG:   COG2060
- HOGENOM:   HBG291815
- OMA:   MSYLTQM
- ProtClustDB:   PRK05482
- BioCyc:   DARO159087:DARO_1087-MONOMER
- HAMAP:   MF_00275
- InterPro:   IPR004623
- PIRSF:   PIRSF001294
- TIGRFAMs:   TIGR00680

Pfam domain/function: PF03814 KdpA

EC number: =3.6.3.12

Molecular weight: Translated: 62872; Mature: 62741

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x122d8800)-; HASH(0x12182ae8)-; HASH(0x11e135e4)-; HASH(0x125b06c0)-; HASH(0x121e84b0)-; HASH(0x10e1dd54)-; HASH(0x11fb6088)-; HASH(0x121dbae0)-; HASH(0x103f58d8)-; HASH(0x124c6d7c)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNHAWILLGIFLVVLLLTVKPLGTYIANVMEGRFRLAGKIESPIYRLCGIRPDEEMGWL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHH
KYACAILLFNVLGVLAVYALQRLQAELPLNPQVFPAVSPDSAFNTAISFATNTNWQGYVG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCEEH
EATMSYLTQMLALAVQNFFSAATGIVVVIALIRGFARHTAKTFGNAWVDLTRITLHVLLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISIIYAVFLTGQGVIQNFNAYKDVTTLEVTSFDNPKLDDAGQPLKDDKGAVVTEPAQTQT
HHHHHHHHHCCCHHHHCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHH
QTLAMGPVASQEAIKMLGTNGGGFMNANSAHPYENPTPLSNFIQMLSIFLIPAALCFTFG
HHHEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RIVGDTRQGWAVLAAMTLMFVALAYTAMHFEQQANPLLTQLGVDPASGNMEGKETRFGIG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCC
DSGLFATITTLASCGAVNAMHDSFTPLGGLVPLIDMQLGEVVFGGVGTGLYGMLVFAIMA
CCHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VFIAGLMIGRTPEYLGKKIEAFEMKMVSIAILVTPLLVLVGTAIAVMLADGKAGIANPGA
HHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
HGFSEILYAFTSAANNNGSAFAGLSANTPFYNVMLGIAMWFGRFGVIVPVLAIAGSLAAK
HHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRIAVGAGTLPTHGPLFVTLLIGTVLLVGLLNYVPALALGPVIEHLVLWAAH
HHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
SNHAWILLGIFLVVLLLTVKPLGTYIANVMEGRFRLAGKIESPIYRLCGIRPDEEMGWL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHH
KYACAILLFNVLGVLAVYALQRLQAELPLNPQVFPAVSPDSAFNTAISFATNTNWQGYVG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCEEH
EATMSYLTQMLALAVQNFFSAATGIVVVIALIRGFARHTAKTFGNAWVDLTRITLHVLLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISIIYAVFLTGQGVIQNFNAYKDVTTLEVTSFDNPKLDDAGQPLKDDKGAVVTEPAQTQT
HHHHHHHHHCCCHHHHCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHH
QTLAMGPVASQEAIKMLGTNGGGFMNANSAHPYENPTPLSNFIQMLSIFLIPAALCFTFG
HHHEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RIVGDTRQGWAVLAAMTLMFVALAYTAMHFEQQANPLLTQLGVDPASGNMEGKETRFGIG
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCC
DSGLFATITTLASCGAVNAMHDSFTPLGGLVPLIDMQLGEVVFGGVGTGLYGMLVFAIMA
CCHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VFIAGLMIGRTPEYLGKKIEAFEMKMVSIAILVTPLLVLVGTAIAVMLADGKAGIANPGA
HHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCC
HGFSEILYAFTSAANNNGSAFAGLSANTPFYNVMLGIAMWFGRFGVIVPVLAIAGSLAAK
HHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRIAVGAGTLPTHGPLFVTLLIGTVLLVGLLNYVPALALGPVIEHLVLWAAH
HHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA