| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906717
Identifier: 71906717
GI number: 71906717
Start: 1181458
End: 1181922
Strand: Reverse
Name: 71906717
Synonym: Daro_1078
Alternate gene names: NA
Gene position: 1181922-1181458 (Counterclockwise)
Preceding gene: 71906718
Following gene: 71906716
Centisome position: 26.26
GC content: 60.86
Gene sequence:
>465_bases ATGCAGGCGTTTCAGGATTACTACCCGGAAAATCTGGCGCATTGCTACGGCTGCGGCCGCAATAATGCGCAGGGGCATCA GATCAAGACCTACTGGGAAGGCGACGAAACCGTCACGCATTTCCAGCCACGCCCCGAGCACACGGCGATTCCCGGCTTTG TCTATGGTGGCCTGCTCGCTTCGCTGATCGACTGCCATGGAACGGGGACGGCCGCTGCCGCAATGTACAAGGCCGAAAAC CGCAGCATGGACAGCCTGCCGGCCTTTCGCTTCGTCACCGGCTCGCTGCAGGTCAGTTACCTGAAGCCGACGCCGCTTGG GCCAGTGCTCGAGATACGCGGCAAGGTAAAGGAAATCAAGGGTCGCAAGGTCGTGGTCGAAGCCACGGTATACGCGGATG GCGTTGCCACGGCACGCGGCGAAGTGATCGCCCTGCAAATGCCGGATACCTTCGTGGCAAGCTGA
Upstream 100 bases:
>100_bases GGCCCCAATGGCTGAATTTGCATGCACTCTGTCTGGCTGAACAGTAGCCGCCGTTCAACGGCCAGCCTACGATGCCGTTT TGCCAATAGAAGGAAACAGC
Downstream 100 bases:
>100_bases TCCTGGCAGCTTTTAACTTGGCGCTGACTGGATACGCCCGCCCCCTCCTCCCGGCTCCCACGGCGGGCTTTGCATAGCCC GCCGGCTGCGCTGGCGTAAA
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase Family Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MQAFQDYYPENLAHCYGCGRNNAQGHQIKTYWEGDETVTHFQPRPEHTAIPGFVYGGLLASLIDCHGTGTAAAAMYKAEN RSMDSLPAFRFVTGSLQVSYLKPTPLGPVLEIRGKVKEIKGRKVVVEATVYADGVATARGEVIALQMPDTFVAS
Sequences:
>Translated_154_residues MQAFQDYYPENLAHCYGCGRNNAQGHQIKTYWEGDETVTHFQPRPEHTAIPGFVYGGLLASLIDCHGTGTAAAAMYKAEN RSMDSLPAFRFVTGSLQVSYLKPTPLGPVLEIRGKVKEIKGRKVVVEATVYADGVATARGEVIALQMPDTFVAS >Mature_154_residues MQAFQDYYPENLAHCYGCGRNNAQGHQIKTYWEGDETVTHFQPRPEHTAIPGFVYGGLLASLIDCHGTGTAAAAMYKAEN RSMDSLPAFRFVTGSLQVSYLKPTPLGPVLEIRGKVKEIKGRKVVVEATVYADGVATARGEVIALQMPDTFVAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16781; Mature: 16781
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAFQDYYPENLAHCYGCGRNNAQGHQIKTYWEGDETVTHFQPRPEHTAIPGFVYGGLLA CCCHHHHCCHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHH SLIDCHGTGTAAAAMYKAENRSMDSLPAFRFVTGSLQVSYLKPTPLGPVLEIRGKVKEIK HHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCCCCHHHHHCCHHHHCC GRKVVVEATVYADGVATARGEVIALQMPDTFVAS CCEEEEEEEEEECCCCCCCCCEEEEECCCHHHCC >Mature Secondary Structure MQAFQDYYPENLAHCYGCGRNNAQGHQIKTYWEGDETVTHFQPRPEHTAIPGFVYGGLLA CCCHHHHCCHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHH SLIDCHGTGTAAAAMYKAENRSMDSLPAFRFVTGSLQVSYLKPTPLGPVLEIRGKVKEIK HHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCCCCHHHHHCCHHHHCC GRKVVVEATVYADGVATARGEVIALQMPDTFVAS CCEEEEEEEEEECCCCCCCCCEEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA