| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906680
Identifier: 71906680
GI number: 71906680
Start: 1141410
End: 1142045
Strand: Reverse
Name: 71906680
Synonym: Daro_1041
Alternate gene names: NA
Gene position: 1142045-1141410 (Counterclockwise)
Preceding gene: 71906681
Following gene: 71906679
Centisome position: 25.37
GC content: 42.77
Gene sequence:
>636_bases GTGGTAATCATTATGTCTATCAAAAAAATGCGCACTATCGGATTTTACATTCCAAGAAAATATATTCTCGCCTTCCTTTT TGCCGTTGCCCCGGCTTTCACAGTCGGCGCGGCGGATGCAACCAGCGAAATCAATGGTGCCTGGATACTCGACGCCAATG CAACTAAAGAGGCCATTCTTACCACACCACCTCCTCCGGATTCCGAAAAACTTGCACAATGGTTTTTATTTATATCTGGT TATCTAGCCGTTGTTACTTACGAATTCGAAGGTAACTTAGCTAAAGCAAGCGTATTCCGTGGAAAAAGGGTGCAGGAGTT TGAACTTATGTCCAACGATGCCTCGGATTTTAAATACGTGCTGAAAAATACAACTACCCCAAAAACAATATCGGTTTCAA TATTAAATAACGGAAAAATTAAGATTGTTCCATCCGATAGTCCAGAGTTCAATTTTCTGAGATGGAAGCATGGGCAGTTA AAGACTGAAACAGCAACCTCTGACGAGGTAAAGGCTGCGATAAGCACTTGGCTCGTTTCATTACAAGCTATTCAAGATGC TCTCCATAAACCATTCAGTACCTCTATTGATATGGCGCCCGACAAGCCGAGCTCTGGCGTTCAGTTTCAACGCTAA
Upstream 100 bases:
>100_bases TAGTAAGTATAAAAGCAAGGATAATTGAAAAATAATACGCAGTTGCAGACTGCGCGGCAGAATTCATTTCTTCGGAATTC GCCTAATCACGTCACTCTCG
Downstream 100 bases:
>100_bases GTCGCCGCGTACTCAAAACCCGACCCTCCGCAATGGGCACGTTGCCGACATTTAGTTAAGAGAATGAAAAAAGAATTCGG AAAACTCACCAATGACCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MVIIMSIKKMRTIGFYIPRKYILAFLFAVAPAFTVGAADATSEINGAWILDANATKEAILTTPPPPDSEKLAQWFLFISG YLAVVTYEFEGNLAKASVFRGKRVQEFELMSNDASDFKYVLKNTTTPKTISVSILNNGKIKIVPSDSPEFNFLRWKHGQL KTETATSDEVKAAISTWLVSLQAIQDALHKPFSTSIDMAPDKPSSGVQFQR
Sequences:
>Translated_211_residues MVIIMSIKKMRTIGFYIPRKYILAFLFAVAPAFTVGAADATSEINGAWILDANATKEAILTTPPPPDSEKLAQWFLFISG YLAVVTYEFEGNLAKASVFRGKRVQEFELMSNDASDFKYVLKNTTTPKTISVSILNNGKIKIVPSDSPEFNFLRWKHGQL KTETATSDEVKAAISTWLVSLQAIQDALHKPFSTSIDMAPDKPSSGVQFQR >Mature_211_residues MVIIMSIKKMRTIGFYIPRKYILAFLFAVAPAFTVGAADATSEINGAWILDANATKEAILTTPPPPDSEKLAQWFLFISG YLAVVTYEFEGNLAKASVFRGKRVQEFELMSNDASDFKYVLKNTTTPKTISVSILNNGKIKIVPSDSPEFNFLRWKHGQL KTETATSDEVKAAISTWLVSLQAIQDALHKPFSTSIDMAPDKPSSGVQFQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23388; Mature: 23388
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIIMSIKKMRTIGFYIPRKYILAFLFAVAPAFTVGAADATSEINGAWILDANATKEAIL CEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEE TTPPPPDSEKLAQWFLFISGYLAVVTYEFEGNLAKASVFRGKRVQEFELMSNDASDFKYV ECCCCCCHHHHHHHHHHHHCEEEEEEEEECCCEEEHHHHCCCCCHHHHHHCCCCHHHHHH LKNTTTPKTISVSILNNGKIKIVPSDSPEFNFLRWKHGQLKTETATSDEVKAAISTWLVS HCCCCCCCEEEEEEECCCEEEEEECCCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHH LQAIQDALHKPFSTSIDMAPDKPSSGVQFQR HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVIIMSIKKMRTIGFYIPRKYILAFLFAVAPAFTVGAADATSEINGAWILDANATKEAIL CEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEE TTPPPPDSEKLAQWFLFISGYLAVVTYEFEGNLAKASVFRGKRVQEFELMSNDASDFKYV ECCCCCCHHHHHHHHHHHHCEEEEEEEEECCCEEEHHHHCCCCCHHHHHHCCCCHHHHHH LKNTTTPKTISVSILNNGKIKIVPSDSPEFNFLRWKHGQLKTETATSDEVKAAISTWLVS HCCCCCCCEEEEEEECCCEEEEEECCCCCCCEEEEECCCEEECCCCHHHHHHHHHHHHHH LQAIQDALHKPFSTSIDMAPDKPSSGVQFQR HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA