| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is zraS [H]
Identifier: 71906604
GI number: 71906604
Start: 1047835
End: 1049880
Strand: Reverse
Name: zraS [H]
Synonym: Daro_0965
Alternate gene names: 71906604
Gene position: 1049880-1047835 (Counterclockwise)
Preceding gene: 71906605
Following gene: 71906603
Centisome position: 23.32
GC content: 57.67
Gene sequence:
>2046_bases ATGGACGCATTTGTCTGGAACGAGCGCTACATGACAGGAGAAGCGCAGGTTGATGAGGAGCATCAGGAACTGGTGCGTAT CATCAACTGGGTCATCGAACACCAATCCGTGCCGGCGCAGGATGACGATATCCAGCGGGTATTGGCCAGCTTGGCCAACT ATGCCGTGATGCACTTCGGACACGAGGAGGAGCTGATGGAGCAGATGCATTGTGACCCCCGCTTCATTCAGGCGCACGTC GCGGTGCATCAGGAATTTGCCCGCCAAGTCGGAAAAATGCTGGAGTTCCAGGGCGGCAAAGCCGATGTTGAATATCTGCT GCGTTTCCTCAGTAGCTGGCTGGCTCATCACATCCTCGGTATTGATCAGTCGATGGCCCGCCAGATCGCAAAGATCCGTG CCGGGGCCGCGCCGGAAGCGGCTTTCGAGGCCGAGAAAAGAATCCCTCATGACCCGTCGACCGCCAGCCTGCTCGATGCG ATGAACGCCTTGTTCCGCATGGTCGCCAGTCGCAACGAGGCATTGGAGAAGCTCAATGCCAGCCTGGGGGCGCAAGTCGC AGCACAAACAGCTGATCTGATGCAATCCAATCAACAGTTGCTGGTCGAGCAAGGGCGACTGCAATTGGCCATGAAGCAGA TTGAAATCACCCAGAAAAAGCTGCTCGAGTCCGAACACCGGCGGTCCGAGGCCGCCAAGCGCGGCATGGAGCAATTGCTT GCCCAGATCATCGATGGCGATCCGGTGCCGACCTTCGTGATCGATGCCCAGCATCGGATCACCCATTGGAACAAGGCTTG CGCCGTGGTCAGCGGCCTGTCCAGCGCAGAGATGGTGGGGACCCAGTTACACTGGAAGGCCTTCTACAAGGAATACCGCC CGGTGATGGCGGACCTGATCGTCAATGGCAGCCTGGAAGCGCAGTACGAGGAATATTACAAGGATCGCTTCAGGCGCTCT TCATTGATTCAGGATGCGTTTGAAGGCGAGGCCTTTTTTGAAGGCCTGGGGCCGAATGGCTTGTGGCTGGCTTTCACGGC AGCCCCGCTACGCAACGCCAATGGTGAGTTGATCGGTGCAATCGAGACCTTGCAGGACGTCACCGAACGGCACCGCGCCC AGGAAAGCTTGCTGCAACACCAGAACCAGCTGGAAAGCCTGGTCGTTCAACGCACGACCCAGTTGGCCACCGCCAATACC GAACTGGAAAACGAGCGGCGCGAGCTCGAAGTCCTGCTTTCAAAAATTGAAGAAGCCCAGCAGCAATTGCTGCAGTCGGA AAAAATGGCGGCAATTGGCCAACTCGCGGCTGGCGTCGCCCACGAAATCAACAACCCTGTCGGCTTCGTCAACTCCAACC TGGGAACGCTGAAGACCTATATCAACAACCTGCTCGGCGTCGTCGACGCCTATGAAGCGGTCGCGGCAGGCGGCGACCCT GCCCAAATTGAGGCTGCCCGGCGAGCGGCCGACATCGACTTTCTGCGTGAAGACCTGCCTTCCCTGCTCATCGAATCCCA GGAGGGCTTGGGACGCGTGACCAAGATTGTCCAGGACCTCAAGGACTTTTCCCGTGTCGATCAGGCCGAATATCAACTGG CCAATCTCAACGCTGCCCTGGAAAGCACCCTGAACGTTGTCTGGAACGAGTTGAAATACAAAGCCGACGTGGTCCGCGAT CTGGGCGATATCCCTGAAGTCGAGTGTGTACCGGCCCAGATCAACCAGGTTTTCATGAACTTGCTGGTCAATGCCGCACA GGCCATCGAGACACACGGCAGGATCACGGTCCGTTCCGGCCAGGAGAACGCCCATGTCTGGTTCGAGATTTCCGACACCG GTAAAGGCATGACGGCGGAAGTATGCCACCGCGTATTCGACCCCTTCTTCACCACCAAGCCGGTCGGCCAGGGTACCGGC CTCGGGCTGTCGATCTCCTACGACATCATTGTCAAAAAACATCGAGGACGTTTCGATGTCGCCAGCACCCCGGGCCAAGG AACAACTTTCAAGTTCTGGCTACCGATTCAGGGCGTGGAAAAATGA
Upstream 100 bases:
>100_bases GGGGCATTGGTTGCCACGCCTTGGAGCGCGTTCAGTCCGGCGCTACCAGCCTGGAGGAAATTCTGCGTGTTCTCGGCCCA CAGGCCGGAGAGGACTAAAA
Downstream 100 bases:
>100_bases CCTCCCCTTAGCGGGCAGGGGCAGCACCAATGTGCTCATTGCCCCCGCAAACGGGACCAACGACAAGACACAAGACGTCG CTCAATAACGGCCTCCGAAC
Product: PAS:hemerythrin HHE cation binding region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 681; Mature: 681
Protein sequence:
>681_residues MDAFVWNERYMTGEAQVDEEHQELVRIINWVIEHQSVPAQDDDIQRVLASLANYAVMHFGHEEELMEQMHCDPRFIQAHV AVHQEFARQVGKMLEFQGGKADVEYLLRFLSSWLAHHILGIDQSMARQIAKIRAGAAPEAAFEAEKRIPHDPSTASLLDA MNALFRMVASRNEALEKLNASLGAQVAAQTADLMQSNQQLLVEQGRLQLAMKQIEITQKKLLESEHRRSEAAKRGMEQLL AQIIDGDPVPTFVIDAQHRITHWNKACAVVSGLSSAEMVGTQLHWKAFYKEYRPVMADLIVNGSLEAQYEEYYKDRFRRS SLIQDAFEGEAFFEGLGPNGLWLAFTAAPLRNANGELIGAIETLQDVTERHRAQESLLQHQNQLESLVVQRTTQLATANT ELENERRELEVLLSKIEEAQQQLLQSEKMAAIGQLAAGVAHEINNPVGFVNSNLGTLKTYINNLLGVVDAYEAVAAGGDP AQIEAARRAADIDFLREDLPSLLIESQEGLGRVTKIVQDLKDFSRVDQAEYQLANLNAALESTLNVVWNELKYKADVVRD LGDIPEVECVPAQINQVFMNLLVNAAQAIETHGRITVRSGQENAHVWFEISDTGKGMTAEVCHRVFDPFFTTKPVGQGTG LGLSISYDIIVKKHRGRFDVASTPGQGTTFKFWLPIQGVEK
Sequences:
>Translated_681_residues MDAFVWNERYMTGEAQVDEEHQELVRIINWVIEHQSVPAQDDDIQRVLASLANYAVMHFGHEEELMEQMHCDPRFIQAHV AVHQEFARQVGKMLEFQGGKADVEYLLRFLSSWLAHHILGIDQSMARQIAKIRAGAAPEAAFEAEKRIPHDPSTASLLDA MNALFRMVASRNEALEKLNASLGAQVAAQTADLMQSNQQLLVEQGRLQLAMKQIEITQKKLLESEHRRSEAAKRGMEQLL AQIIDGDPVPTFVIDAQHRITHWNKACAVVSGLSSAEMVGTQLHWKAFYKEYRPVMADLIVNGSLEAQYEEYYKDRFRRS SLIQDAFEGEAFFEGLGPNGLWLAFTAAPLRNANGELIGAIETLQDVTERHRAQESLLQHQNQLESLVVQRTTQLATANT ELENERRELEVLLSKIEEAQQQLLQSEKMAAIGQLAAGVAHEINNPVGFVNSNLGTLKTYINNLLGVVDAYEAVAAGGDP AQIEAARRAADIDFLREDLPSLLIESQEGLGRVTKIVQDLKDFSRVDQAEYQLANLNAALESTLNVVWNELKYKADVVRD LGDIPEVECVPAQINQVFMNLLVNAAQAIETHGRITVRSGQENAHVWFEISDTGKGMTAEVCHRVFDPFFTTKPVGQGTG LGLSISYDIIVKKHRGRFDVASTPGQGTTFKFWLPIQGVEK >Mature_681_residues MDAFVWNERYMTGEAQVDEEHQELVRIINWVIEHQSVPAQDDDIQRVLASLANYAVMHFGHEEELMEQMHCDPRFIQAHV AVHQEFARQVGKMLEFQGGKADVEYLLRFLSSWLAHHILGIDQSMARQIAKIRAGAAPEAAFEAEKRIPHDPSTASLLDA MNALFRMVASRNEALEKLNASLGAQVAAQTADLMQSNQQLLVEQGRLQLAMKQIEITQKKLLESEHRRSEAAKRGMEQLL AQIIDGDPVPTFVIDAQHRITHWNKACAVVSGLSSAEMVGTQLHWKAFYKEYRPVMADLIVNGSLEAQYEEYYKDRFRRS SLIQDAFEGEAFFEGLGPNGLWLAFTAAPLRNANGELIGAIETLQDVTERHRAQESLLQHQNQLESLVVQRTTQLATANT ELENERRELEVLLSKIEEAQQQLLQSEKMAAIGQLAAGVAHEINNPVGFVNSNLGTLKTYINNLLGVVDAYEAVAAGGDP AQIEAARRAADIDFLREDLPSLLIESQEGLGRVTKIVQDLKDFSRVDQAEYQLANLNAALESTLNVVWNELKYKADVVRD LGDIPEVECVPAQINQVFMNLLVNAAQAIETHGRITVRSGQENAHVWFEISDTGKGMTAEVCHRVFDPFFTTKPVGQGTG LGLSISYDIIVKKHRGRFDVASTPGQGTTFKFWLPIQGVEK
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=265, Percent_Identity=32.0754716981132, Blast_Score=132, Evalue=5e-32, Organism=Escherichia coli, GI1788549, Length=430, Percent_Identity=26.9767441860465, Blast_Score=130, Evalue=3e-31, Organism=Escherichia coli, GI145693157, Length=369, Percent_Identity=25.2032520325203, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1789808, Length=166, Percent_Identity=32.5301204819277, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI87081816, Length=316, Percent_Identity=26.2658227848101, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 76078; Mature: 76078
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAFVWNERYMTGEAQVDEEHQELVRIINWVIEHQSVPAQDDDIQRVLASLANYAVMHFG CCCEEECCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC HEEELMEQMHCDPRFIQAHVAVHQEFARQVGKMLEFQGGKADVEYLLRFLSSWLAHHILG CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC IDQSMARQIAKIRAGAAPEAAFEAEKRIPHDPSTASLLDAMNALFRMVASRNEALEKLNA CCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SLGAQVAAQTADLMQSNQQLLVEQGRLQLAMKQIEITQKKLLESEHRRSEAAKRGMEQLL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQIIDGDPVPTFVIDAQHRITHWNKACAVVSGLSSAEMVGTQLHWKAFYKEYRPVMADLI HHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VNGSLEAQYEEYYKDRFRRSSLIQDAFEGEAFFEGLGPNGLWLAFTAAPLRNANGELIGA HCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEECCCCCCCCCEEHH IETLQDVTERHRAQESLLQHQNQLESLVVQRTTQLATANTELENERRELEVLLSKIEEAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH QQLLQSEKMAAIGQLAAGVAHEINNPVGFVNSNLGTLKTYINNLLGVVDAYEAVAAGGDP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH AQIEAARRAADIDFLREDLPSLLIESQEGLGRVTKIVQDLKDFSRVDQAEYQLANLNAAL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESTLNVVWNELKYKADVVRDLGDIPEVECVPAQINQVFMNLLVNAAQAIETHGRITVRSG HHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCEEEECC QENAHVWFEISDTGKGMTAEVCHRVFDPFFTTKPVGQGTGLGLSISYDIIVKKHRGRFDV CCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCC ASTPGQGTTFKFWLPIQGVEK CCCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MDAFVWNERYMTGEAQVDEEHQELVRIINWVIEHQSVPAQDDDIQRVLASLANYAVMHFG CCCEEECCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC HEEELMEQMHCDPRFIQAHVAVHQEFARQVGKMLEFQGGKADVEYLLRFLSSWLAHHILG CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHC IDQSMARQIAKIRAGAAPEAAFEAEKRIPHDPSTASLLDAMNALFRMVASRNEALEKLNA CCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SLGAQVAAQTADLMQSNQQLLVEQGRLQLAMKQIEITQKKLLESEHRRSEAAKRGMEQLL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQIIDGDPVPTFVIDAQHRITHWNKACAVVSGLSSAEMVGTQLHWKAFYKEYRPVMADLI HHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VNGSLEAQYEEYYKDRFRRSSLIQDAFEGEAFFEGLGPNGLWLAFTAAPLRNANGELIGA HCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEECCCCCCCCCEEHH IETLQDVTERHRAQESLLQHQNQLESLVVQRTTQLATANTELENERRELEVLLSKIEEAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH QQLLQSEKMAAIGQLAAGVAHEINNPVGFVNSNLGTLKTYINNLLGVVDAYEAVAAGGDP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH AQIEAARRAADIDFLREDLPSLLIESQEGLGRVTKIVQDLKDFSRVDQAEYQLANLNAAL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESTLNVVWNELKYKADVVRDLGDIPEVECVPAQINQVFMNLLVNAAQAIETHGRITVRSG HHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCEEEECC QENAHVWFEISDTGKGMTAEVCHRVFDPFFTTKPVGQGTGLGLSISYDIIVKKHRGRFDV CCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCC ASTPGQGTTFKFWLPIQGVEK CCCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]