Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71906479

Identifier: 71906479

GI number: 71906479

Start: 914101

End: 914958

Strand: Reverse

Name: 71906479

Synonym: Daro_0840

Alternate gene names: NA

Gene position: 914958-914101 (Counterclockwise)

Preceding gene: 71906481

Following gene: 71906475

Centisome position: 20.33

GC content: 59.21

Gene sequence:

>858_bases
ATGCTCGACCATCCGTTGCCGGACATCGACTCCTGGACACTGCTCTTCAGCAATAATGCCCTGCCGGTCCTGCGTGTCAC
CAAGCGGCGAATCGAGGAAATGCGGGCCAATCTGGATCGGGTCGACGCCCGCGAACTGGCTCGGCTGATTCTGCAAGACC
CAATCATGACGGTGCGGGTACTGGCTTTCATTCAGCCAATGCGTGGTCGTTCGCTGCAGCATGACATCACCACCATTGCC
AGTGCTGTAATGATGGCCGGGATAGAACCCTTCTTTAACCGCTTCAGCGAACTGTTTACCATCGAGGATCAGCTCAAGGA
AGGCGGTCCGCAAGCCTTGCTCGGTGTCCTGCAGATCATTCGTCGCGCCCAGCGTGCCGCTGACTACGCTCAGGAATGGG
CCATCTGGCGCCACGACATCAACATGGAAGAAGTGCGTATCGCCGCGCTGCTGCACGACCTGGCGGAACTTCTGGTGTGG
TGTTCCGCACCACGACTAGGCCTGCGCATTCTCGAACAGCAAAAAGCCGATCCGACGATGCGTAGCGCCGATGCTCAGAA
GAACACCCTGGGTTTCACCTTTTTCCAAATTCAGCACGAACTCTGTCGCGTCTGGCACCTGCCTGCATTGCTGCAAACGC
TGATCGATGACGATAACGCCGAACAGCCGCGAGTCAAGAATGTCACCCTCGCCGTTCGCCTGGCGCGACACTCCTCGCAT
GGCTGGGATGATGCCGCGCTCCCCGACGATTACAAGGATATCGGCCAGTTGCTGAACATCACCCCGGAAGCCGTGCGCCA
GCGCTTGGGCCTTGAACCGATGCCGGCCCGCGAGGCCGACGGCCAAGGCGCTGATTAA

Upstream 100 bases:

>100_bases
GCTTGGCCGATTATCGCATGGCCCCACCCTTGCCCGGCACCGCCCGCCCCCTTAAACTCCCCGTGCTTGATCCGAAACCA
ATTTCAAGGGCTCATACAAT

Downstream 100 bases:

>100_bases
TCGGCGGCCAAAACCCGCCTGGGACTTCCCCCCGGCTCGGACTAGCCGCAGTAACGCAGGTTGGCCCAGTCGAGCAGCAA
TTCAGGTGCCTGATAGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase HDOD

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MLDHPLPDIDSWTLLFSNNALPVLRVTKRRIEEMRANLDRVDARELARLILQDPIMTVRVLAFIQPMRGRSLQHDITTIA
SAVMMAGIEPFFNRFSELFTIEDQLKEGGPQALLGVLQIIRRAQRAADYAQEWAIWRHDINMEEVRIAALLHDLAELLVW
CSAPRLGLRILEQQKADPTMRSADAQKNTLGFTFFQIQHELCRVWHLPALLQTLIDDDNAEQPRVKNVTLAVRLARHSSH
GWDDAALPDDYKDIGQLLNITPEAVRQRLGLEPMPAREADGQGAD

Sequences:

>Translated_285_residues
MLDHPLPDIDSWTLLFSNNALPVLRVTKRRIEEMRANLDRVDARELARLILQDPIMTVRVLAFIQPMRGRSLQHDITTIA
SAVMMAGIEPFFNRFSELFTIEDQLKEGGPQALLGVLQIIRRAQRAADYAQEWAIWRHDINMEEVRIAALLHDLAELLVW
CSAPRLGLRILEQQKADPTMRSADAQKNTLGFTFFQIQHELCRVWHLPALLQTLIDDDNAEQPRVKNVTLAVRLARHSSH
GWDDAALPDDYKDIGQLLNITPEAVRQRLGLEPMPAREADGQGAD
>Mature_285_residues
MLDHPLPDIDSWTLLFSNNALPVLRVTKRRIEEMRANLDRVDARELARLILQDPIMTVRVLAFIQPMRGRSLQHDITTIA
SAVMMAGIEPFFNRFSELFTIEDQLKEGGPQALLGVLQIIRRAQRAADYAQEWAIWRHDINMEEVRIAALLHDLAELLVW
CSAPRLGLRILEQQKADPTMRSADAQKNTLGFTFFQIQHELCRVWHLPALLQTLIDDDNAEQPRVKNVTLAVRLARHSSH
GWDDAALPDDYKDIGQLLNITPEAVRQRLGLEPMPAREADGQGAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32456; Mature: 32456

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDHPLPDIDSWTLLFSNNALPVLRVTKRRIEEMRANLDRVDARELARLILQDPIMTVRV
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHH
LAFIQPMRGRSLQHDITTIASAVMMAGIEPFFNRFSELFTIEDQLKEGGPQALLGVLQII
HHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RRAQRAADYAQEWAIWRHDINMEEVRIAALLHDLAELLVWCSAPRLGLRILEQQKADPTM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCH
RSADAQKNTLGFTFFQIQHELCRVWHLPALLQTLIDDDNAEQPRVKNVTLAVRLARHSSH
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
GWDDAALPDDYKDIGQLLNITPEAVRQRLGLEPMPAREADGQGAD
CCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLDHPLPDIDSWTLLFSNNALPVLRVTKRRIEEMRANLDRVDARELARLILQDPIMTVRV
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHH
LAFIQPMRGRSLQHDITTIASAVMMAGIEPFFNRFSELFTIEDQLKEGGPQALLGVLQII
HHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
RRAQRAADYAQEWAIWRHDINMEEVRIAALLHDLAELLVWCSAPRLGLRILEQQKADPTM
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCH
RSADAQKNTLGFTFFQIQHELCRVWHLPALLQTLIDDDNAEQPRVKNVTLAVRLARHSSH
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
GWDDAALPDDYKDIGQLLNITPEAVRQRLGLEPMPAREADGQGAD
CCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA