| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906479
Identifier: 71906479
GI number: 71906479
Start: 914101
End: 914958
Strand: Reverse
Name: 71906479
Synonym: Daro_0840
Alternate gene names: NA
Gene position: 914958-914101 (Counterclockwise)
Preceding gene: 71906481
Following gene: 71906475
Centisome position: 20.33
GC content: 59.21
Gene sequence:
>858_bases ATGCTCGACCATCCGTTGCCGGACATCGACTCCTGGACACTGCTCTTCAGCAATAATGCCCTGCCGGTCCTGCGTGTCAC CAAGCGGCGAATCGAGGAAATGCGGGCCAATCTGGATCGGGTCGACGCCCGCGAACTGGCTCGGCTGATTCTGCAAGACC CAATCATGACGGTGCGGGTACTGGCTTTCATTCAGCCAATGCGTGGTCGTTCGCTGCAGCATGACATCACCACCATTGCC AGTGCTGTAATGATGGCCGGGATAGAACCCTTCTTTAACCGCTTCAGCGAACTGTTTACCATCGAGGATCAGCTCAAGGA AGGCGGTCCGCAAGCCTTGCTCGGTGTCCTGCAGATCATTCGTCGCGCCCAGCGTGCCGCTGACTACGCTCAGGAATGGG CCATCTGGCGCCACGACATCAACATGGAAGAAGTGCGTATCGCCGCGCTGCTGCACGACCTGGCGGAACTTCTGGTGTGG TGTTCCGCACCACGACTAGGCCTGCGCATTCTCGAACAGCAAAAAGCCGATCCGACGATGCGTAGCGCCGATGCTCAGAA GAACACCCTGGGTTTCACCTTTTTCCAAATTCAGCACGAACTCTGTCGCGTCTGGCACCTGCCTGCATTGCTGCAAACGC TGATCGATGACGATAACGCCGAACAGCCGCGAGTCAAGAATGTCACCCTCGCCGTTCGCCTGGCGCGACACTCCTCGCAT GGCTGGGATGATGCCGCGCTCCCCGACGATTACAAGGATATCGGCCAGTTGCTGAACATCACCCCGGAAGCCGTGCGCCA GCGCTTGGGCCTTGAACCGATGCCGGCCCGCGAGGCCGACGGCCAAGGCGCTGATTAA
Upstream 100 bases:
>100_bases GCTTGGCCGATTATCGCATGGCCCCACCCTTGCCCGGCACCGCCCGCCCCCTTAAACTCCCCGTGCTTGATCCGAAACCA ATTTCAAGGGCTCATACAAT
Downstream 100 bases:
>100_bases TCGGCGGCCAAAACCCGCCTGGGACTTCCCCCCGGCTCGGACTAGCCGCAGTAACGCAGGTTGGCCCAGTCGAGCAGCAA TTCAGGTGCCTGATAGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase HDOD
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MLDHPLPDIDSWTLLFSNNALPVLRVTKRRIEEMRANLDRVDARELARLILQDPIMTVRVLAFIQPMRGRSLQHDITTIA SAVMMAGIEPFFNRFSELFTIEDQLKEGGPQALLGVLQIIRRAQRAADYAQEWAIWRHDINMEEVRIAALLHDLAELLVW CSAPRLGLRILEQQKADPTMRSADAQKNTLGFTFFQIQHELCRVWHLPALLQTLIDDDNAEQPRVKNVTLAVRLARHSSH GWDDAALPDDYKDIGQLLNITPEAVRQRLGLEPMPAREADGQGAD
Sequences:
>Translated_285_residues MLDHPLPDIDSWTLLFSNNALPVLRVTKRRIEEMRANLDRVDARELARLILQDPIMTVRVLAFIQPMRGRSLQHDITTIA SAVMMAGIEPFFNRFSELFTIEDQLKEGGPQALLGVLQIIRRAQRAADYAQEWAIWRHDINMEEVRIAALLHDLAELLVW CSAPRLGLRILEQQKADPTMRSADAQKNTLGFTFFQIQHELCRVWHLPALLQTLIDDDNAEQPRVKNVTLAVRLARHSSH GWDDAALPDDYKDIGQLLNITPEAVRQRLGLEPMPAREADGQGAD >Mature_285_residues MLDHPLPDIDSWTLLFSNNALPVLRVTKRRIEEMRANLDRVDARELARLILQDPIMTVRVLAFIQPMRGRSLQHDITTIA SAVMMAGIEPFFNRFSELFTIEDQLKEGGPQALLGVLQIIRRAQRAADYAQEWAIWRHDINMEEVRIAALLHDLAELLVW CSAPRLGLRILEQQKADPTMRSADAQKNTLGFTFFQIQHELCRVWHLPALLQTLIDDDNAEQPRVKNVTLAVRLARHSSH GWDDAALPDDYKDIGQLLNITPEAVRQRLGLEPMPAREADGQGAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32456; Mature: 32456
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDHPLPDIDSWTLLFSNNALPVLRVTKRRIEEMRANLDRVDARELARLILQDPIMTVRV CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHH LAFIQPMRGRSLQHDITTIASAVMMAGIEPFFNRFSELFTIEDQLKEGGPQALLGVLQII HHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RRAQRAADYAQEWAIWRHDINMEEVRIAALLHDLAELLVWCSAPRLGLRILEQQKADPTM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCH RSADAQKNTLGFTFFQIQHELCRVWHLPALLQTLIDDDNAEQPRVKNVTLAVRLARHSSH HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC GWDDAALPDDYKDIGQLLNITPEAVRQRLGLEPMPAREADGQGAD CCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLDHPLPDIDSWTLLFSNNALPVLRVTKRRIEEMRANLDRVDARELARLILQDPIMTVRV CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHH LAFIQPMRGRSLQHDITTIASAVMMAGIEPFFNRFSELFTIEDQLKEGGPQALLGVLQII HHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RRAQRAADYAQEWAIWRHDINMEEVRIAALLHDLAELLVWCSAPRLGLRILEQQKADPTM HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCH RSADAQKNTLGFTFFQIQHELCRVWHLPALLQTLIDDDNAEQPRVKNVTLAVRLARHSSH HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC GWDDAALPDDYKDIGQLLNITPEAVRQRLGLEPMPAREADGQGAD CCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA