| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906461
Identifier: 71906461
GI number: 71906461
Start: 893948
End: 894706
Strand: Reverse
Name: 71906461
Synonym: Daro_0822
Alternate gene names: NA
Gene position: 894706-893948 (Counterclockwise)
Preceding gene: 71906462
Following gene: 71906460
Centisome position: 19.88
GC content: 46.77
Gene sequence:
>759_bases ATGGTAAAACTCTCACTGGTCGGCGTTTTCGTTGCGCTCTCATGTATTTCGTCAGGTGTTAACGCAGTTCAGCCATCTGT TGAAGAACGACTGACGTCGTGTGACCCTAGCATTGCAGTTGCTGCAGCAGATGAGTTTGTAGGAAACCCGTCAAATTCCC ACGACGAAGGGCAACTGTTTACAGTGGCCAAAATATATTTGGAAAACAAACGCGAGGATGATGCAGTGTTTTGGTATTTC GCGGCGAAGCTGCGACTTATTCATTTCATCGCCGGTGATGAAAATAATCAGAAATACACAATGATGCTGGGCTGGGGTTC CGGGATACTGGAGCCACATATCAAGATTCATGCGCTAAAAGACTTGAACAAACTTCGTGATACCACTGATCACCTCATAA CGTGGAACGATAAGACCTACGATCAATACAAAAAACATAACTCGGTGAAGGCAGCAAAACTGGAAGCTGATCTCCAGCAA ATGTTCATCAAACTTGAGCGAGAACAAAGAGAATATGGCATGGCCGCCAAGGTCTTTAGTAGTCGAGTCCCTGAAGCTGC GAAACAGGCATGGGATGCTGCTCTGAAGATAGGTTATGGTTCCTCTGTCAGCATCTACCCGGGTTTCGAGGGGCTGCAAA AGTTGAGTACATCCACCAACACGGTATTGGAAAATGAAGCGAGACTGGCCGCGACTGTTTCCGAAAATGTTTTCTTCGGT TTGCGAGCGAACTGTCAGGATCCCAAAACAGGGCGATAA
Upstream 100 bases:
>100_bases TTTGAGTCTATTTTCTCAATTTAAAACCAATTGTCTTTGGACCCAAAGGGATTGCTCGCTCTATTCACCCCTATGAGGTT ATTCAAATCAGGCACTCAGA
Downstream 100 bases:
>100_bases AGGGGGCTCGTTTTCTTTCCGACCAAGACGGTGGACGAAAGGGGCAAATGCCATTTCAATTGCCGCTCTTTTTTCCAGGT GACCATAGCATTCCGCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MVKLSLVGVFVALSCISSGVNAVQPSVEERLTSCDPSIAVAAADEFVGNPSNSHDEGQLFTVAKIYLENKREDDAVFWYF AAKLRLIHFIAGDENNQKYTMMLGWGSGILEPHIKIHALKDLNKLRDTTDHLITWNDKTYDQYKKHNSVKAAKLEADLQQ MFIKLEREQREYGMAAKVFSSRVPEAAKQAWDAALKIGYGSSVSIYPGFEGLQKLSTSTNTVLENEARLAATVSENVFFG LRANCQDPKTGR
Sequences:
>Translated_252_residues MVKLSLVGVFVALSCISSGVNAVQPSVEERLTSCDPSIAVAAADEFVGNPSNSHDEGQLFTVAKIYLENKREDDAVFWYF AAKLRLIHFIAGDENNQKYTMMLGWGSGILEPHIKIHALKDLNKLRDTTDHLITWNDKTYDQYKKHNSVKAAKLEADLQQ MFIKLEREQREYGMAAKVFSSRVPEAAKQAWDAALKIGYGSSVSIYPGFEGLQKLSTSTNTVLENEARLAATVSENVFFG LRANCQDPKTGR >Mature_252_residues MVKLSLVGVFVALSCISSGVNAVQPSVEERLTSCDPSIAVAAADEFVGNPSNSHDEGQLFTVAKIYLENKREDDAVFWYF AAKLRLIHFIAGDENNQKYTMMLGWGSGILEPHIKIHALKDLNKLRDTTDHLITWNDKTYDQYKKHNSVKAAKLEADLQQ MFIKLEREQREYGMAAKVFSSRVPEAAKQAWDAALKIGYGSSVSIYPGFEGLQKLSTSTNTVLENEARLAATVSENVFFG LRANCQDPKTGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28040; Mature: 28040
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKLSLVGVFVALSCISSGVNAVQPSVEERLTSCDPSIAVAAADEFVGNPSNSHDEGQLF CEEEHHHHHHHHHHHHHCCHHHCCCCHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCEE TVAKIYLENKREDDAVFWYFAAKLRLIHFIAGDENNQKYTMMLGWGSGILEPHIKIHALK EEEEEEECCCCCCCCEEHHHHHHHHHEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEHH DLNKLRDTTDHLITWNDKTYDQYKKHNSVKAAKLEADLQQMFIKLEREQREYGMAAKVFS HHHHHHCCCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRVPEAAKQAWDAALKIGYGSSVSIYPGFEGLQKLSTSTNTVLENEARLAATVSENVFFG HCCCHHHHHHHHHHEEECCCCEEEECCCHHHHHHHHCCCHHHHHCCCCEEEEECCCEEEE LRANCQDPKTGR EECCCCCCCCCC >Mature Secondary Structure MVKLSLVGVFVALSCISSGVNAVQPSVEERLTSCDPSIAVAAADEFVGNPSNSHDEGQLF CEEEHHHHHHHHHHHHHCCHHHCCCCHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCEE TVAKIYLENKREDDAVFWYFAAKLRLIHFIAGDENNQKYTMMLGWGSGILEPHIKIHALK EEEEEEECCCCCCCCEEHHHHHHHHHEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEHH DLNKLRDTTDHLITWNDKTYDQYKKHNSVKAAKLEADLQQMFIKLEREQREYGMAAKVFS HHHHHHCCCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRVPEAAKQAWDAALKIGYGSSVSIYPGFEGLQKLSTSTNTVLENEARLAATVSENVFFG HCCCHHHHHHHHHHEEECCCCEEEECCCHHHHHHHHCCCHHHHHCCCCEEEEECCCEEEE LRANCQDPKTGR EECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA