Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

Click here to switch to the map view.

The map label for this gene is 71906461

Identifier: 71906461

GI number: 71906461

Start: 893948

End: 894706

Strand: Reverse

Name: 71906461

Synonym: Daro_0822

Alternate gene names: NA

Gene position: 894706-893948 (Counterclockwise)

Preceding gene: 71906462

Following gene: 71906460

Centisome position: 19.88

GC content: 46.77

Gene sequence:

>759_bases
ATGGTAAAACTCTCACTGGTCGGCGTTTTCGTTGCGCTCTCATGTATTTCGTCAGGTGTTAACGCAGTTCAGCCATCTGT
TGAAGAACGACTGACGTCGTGTGACCCTAGCATTGCAGTTGCTGCAGCAGATGAGTTTGTAGGAAACCCGTCAAATTCCC
ACGACGAAGGGCAACTGTTTACAGTGGCCAAAATATATTTGGAAAACAAACGCGAGGATGATGCAGTGTTTTGGTATTTC
GCGGCGAAGCTGCGACTTATTCATTTCATCGCCGGTGATGAAAATAATCAGAAATACACAATGATGCTGGGCTGGGGTTC
CGGGATACTGGAGCCACATATCAAGATTCATGCGCTAAAAGACTTGAACAAACTTCGTGATACCACTGATCACCTCATAA
CGTGGAACGATAAGACCTACGATCAATACAAAAAACATAACTCGGTGAAGGCAGCAAAACTGGAAGCTGATCTCCAGCAA
ATGTTCATCAAACTTGAGCGAGAACAAAGAGAATATGGCATGGCCGCCAAGGTCTTTAGTAGTCGAGTCCCTGAAGCTGC
GAAACAGGCATGGGATGCTGCTCTGAAGATAGGTTATGGTTCCTCTGTCAGCATCTACCCGGGTTTCGAGGGGCTGCAAA
AGTTGAGTACATCCACCAACACGGTATTGGAAAATGAAGCGAGACTGGCCGCGACTGTTTCCGAAAATGTTTTCTTCGGT
TTGCGAGCGAACTGTCAGGATCCCAAAACAGGGCGATAA

Upstream 100 bases:

>100_bases
TTTGAGTCTATTTTCTCAATTTAAAACCAATTGTCTTTGGACCCAAAGGGATTGCTCGCTCTATTCACCCCTATGAGGTT
ATTCAAATCAGGCACTCAGA

Downstream 100 bases:

>100_bases
AGGGGGCTCGTTTTCTTTCCGACCAAGACGGTGGACGAAAGGGGCAAATGCCATTTCAATTGCCGCTCTTTTTTCCAGGT
GACCATAGCATTCCGCTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MVKLSLVGVFVALSCISSGVNAVQPSVEERLTSCDPSIAVAAADEFVGNPSNSHDEGQLFTVAKIYLENKREDDAVFWYF
AAKLRLIHFIAGDENNQKYTMMLGWGSGILEPHIKIHALKDLNKLRDTTDHLITWNDKTYDQYKKHNSVKAAKLEADLQQ
MFIKLEREQREYGMAAKVFSSRVPEAAKQAWDAALKIGYGSSVSIYPGFEGLQKLSTSTNTVLENEARLAATVSENVFFG
LRANCQDPKTGR

Sequences:

>Translated_252_residues
MVKLSLVGVFVALSCISSGVNAVQPSVEERLTSCDPSIAVAAADEFVGNPSNSHDEGQLFTVAKIYLENKREDDAVFWYF
AAKLRLIHFIAGDENNQKYTMMLGWGSGILEPHIKIHALKDLNKLRDTTDHLITWNDKTYDQYKKHNSVKAAKLEADLQQ
MFIKLEREQREYGMAAKVFSSRVPEAAKQAWDAALKIGYGSSVSIYPGFEGLQKLSTSTNTVLENEARLAATVSENVFFG
LRANCQDPKTGR
>Mature_252_residues
MVKLSLVGVFVALSCISSGVNAVQPSVEERLTSCDPSIAVAAADEFVGNPSNSHDEGQLFTVAKIYLENKREDDAVFWYF
AAKLRLIHFIAGDENNQKYTMMLGWGSGILEPHIKIHALKDLNKLRDTTDHLITWNDKTYDQYKKHNSVKAAKLEADLQQ
MFIKLEREQREYGMAAKVFSSRVPEAAKQAWDAALKIGYGSSVSIYPGFEGLQKLSTSTNTVLENEARLAATVSENVFFG
LRANCQDPKTGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28040; Mature: 28040

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLSLVGVFVALSCISSGVNAVQPSVEERLTSCDPSIAVAAADEFVGNPSNSHDEGQLF
CEEEHHHHHHHHHHHHHCCHHHCCCCHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCEE
TVAKIYLENKREDDAVFWYFAAKLRLIHFIAGDENNQKYTMMLGWGSGILEPHIKIHALK
EEEEEEECCCCCCCCEEHHHHHHHHHEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEHH
DLNKLRDTTDHLITWNDKTYDQYKKHNSVKAAKLEADLQQMFIKLEREQREYGMAAKVFS
HHHHHHCCCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRVPEAAKQAWDAALKIGYGSSVSIYPGFEGLQKLSTSTNTVLENEARLAATVSENVFFG
HCCCHHHHHHHHHHEEECCCCEEEECCCHHHHHHHHCCCHHHHHCCCCEEEEECCCEEEE
LRANCQDPKTGR
EECCCCCCCCCC
>Mature Secondary Structure
MVKLSLVGVFVALSCISSGVNAVQPSVEERLTSCDPSIAVAAADEFVGNPSNSHDEGQLF
CEEEHHHHHHHHHHHHHCCHHHCCCCHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCEE
TVAKIYLENKREDDAVFWYFAAKLRLIHFIAGDENNQKYTMMLGWGSGILEPHIKIHALK
EEEEEEECCCCCCCCEEHHHHHHHHHEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEHH
DLNKLRDTTDHLITWNDKTYDQYKKHNSVKAAKLEADLQQMFIKLEREQREYGMAAKVFS
HHHHHHCCCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRVPEAAKQAWDAALKIGYGSSVSIYPGFEGLQKLSTSTNTVLENEARLAATVSENVFFG
HCCCHHHHHHHHHHEEECCCCEEEECCCHHHHHHHHCCCHHHHHCCCCEEEEECCCEEEE
LRANCQDPKTGR
EECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA