| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906430
Identifier: 71906430
GI number: 71906430
Start: 859461
End: 860417
Strand: Reverse
Name: 71906430
Synonym: Daro_0791
Alternate gene names: NA
Gene position: 860417-859461 (Counterclockwise)
Preceding gene: 71906431
Following gene: 71906429
Centisome position: 19.12
GC content: 55.28
Gene sequence:
>957_bases ATGTCTGTAACCACTTGGTCCAATATGCCGGATTCTGTAGATGACCGTATCGGCATCCCTAGCAACCCACAACCTGGGGA AGTAAATAACCGCGTCATTGGAGGCACCGTCTCCCTGGTACAAGGCCAGCAAGCTACTGAGTTCTCAACCTACCGAGCAT CTGAGAGCGACCTAGCCCCGAGCTCTGAAAAGGGAATGATGGGCACGGTACGCAATAACGGCGGGTTCATCACCACCAAC GTAACCCCCAATAGCACCATCGAAATCCCAGGCTTCGGGCGTACCTCTGTGAAAGTTGCTGAGAGCCTTGGCTACCTGAC GCGTACAGGTGATGGCCGCTATGTGGAGACTTCCCGCCTGGGAAAAGATGAGGGCTCTTCTGAGGGTGGCACCCTGGAGG AGTCCAAAGGTACGCCCAACGATGCCCCAGACAATGGCGCAGAACTCTTTGGTAGTGGCTTCGAGGCGGAATACGGGGAA CTCATCAAAGATGTCCCACAGGGTGTCTATGATTCCCTCCTGGCTTCTGCAAACGTCCATATTGGTGAAGGCCTGGACTT GGGGAGTATCTCTGAGAAGCTGGCTCCACGTCTGGCCTCTTCTATGGGCATAGAGCCTAAAGCAGCAGCAGCCATGCTAG ATGAAGGCTCAATGATCTGGCAGGCGCAGGCTGACATTGCCGTTGAGCGTCACGGAGCGGACCCTGATGACTTCTATCAG TGGGCAAGAGACAACCGCAAGAATGAGCTTCAGCAGGCGGTTAATGGTCACCTCTTCCAGCGCTCCACAAAGGGCTACAC CACCCTGGTGAATGACTACTTTGATAACACCATTCCCACCGTGGCAGCCCTGAAGGCTGGCGGCATCCCTGTCACAGAAA AGGGAGGTGAGGTCATGGTTAAGCTCAAGGGTCACTGGATGAGCGTAGGCGCTGCAGTGAAGGCTCGGCTGGTATGA
Upstream 100 bases:
>100_bases TGTGCACAAAAGGCAATGCCCAGACCATCAAGCACTGCGAAGACGACACCTGCCCTCTTCTATTCCATCGCCCATTCCAA AACCTCAAGGAGTCAAACAA
Downstream 100 bases:
>100_bases AGCGGCGACCACAACCAATCATCTGCAAGCGTAACCAGCAGCAGACACCACAGAAGGGAAGCAGCAAATGAACCAAGGAG ATTTTGTAAATGTGTGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSVTTWSNMPDSVDDRIGIPSNPQPGEVNNRVIGGTVSLVQGQQATEFSTYRASESDLAPSSEKGMMGTVRNNGGFITTN VTPNSTIEIPGFGRTSVKVAESLGYLTRTGDGRYVETSRLGKDEGSSEGGTLEESKGTPNDAPDNGAELFGSGFEAEYGE LIKDVPQGVYDSLLASANVHIGEGLDLGSISEKLAPRLASSMGIEPKAAAAMLDEGSMIWQAQADIAVERHGADPDDFYQ WARDNRKNELQQAVNGHLFQRSTKGYTTLVNDYFDNTIPTVAALKAGGIPVTEKGGEVMVKLKGHWMSVGAAVKARLV
Sequences:
>Translated_318_residues MSVTTWSNMPDSVDDRIGIPSNPQPGEVNNRVIGGTVSLVQGQQATEFSTYRASESDLAPSSEKGMMGTVRNNGGFITTN VTPNSTIEIPGFGRTSVKVAESLGYLTRTGDGRYVETSRLGKDEGSSEGGTLEESKGTPNDAPDNGAELFGSGFEAEYGE LIKDVPQGVYDSLLASANVHIGEGLDLGSISEKLAPRLASSMGIEPKAAAAMLDEGSMIWQAQADIAVERHGADPDDFYQ WARDNRKNELQQAVNGHLFQRSTKGYTTLVNDYFDNTIPTVAALKAGGIPVTEKGGEVMVKLKGHWMSVGAAVKARLV >Mature_317_residues SVTTWSNMPDSVDDRIGIPSNPQPGEVNNRVIGGTVSLVQGQQATEFSTYRASESDLAPSSEKGMMGTVRNNGGFITTNV TPNSTIEIPGFGRTSVKVAESLGYLTRTGDGRYVETSRLGKDEGSSEGGTLEESKGTPNDAPDNGAELFGSGFEAEYGEL IKDVPQGVYDSLLASANVHIGEGLDLGSISEKLAPRLASSMGIEPKAAAAMLDEGSMIWQAQADIAVERHGADPDDFYQW ARDNRKNELQQAVNGHLFQRSTKGYTTLVNDYFDNTIPTVAALKAGGIPVTEKGGEVMVKLKGHWMSVGAAVKARLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33807; Mature: 33676
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTTWSNMPDSVDDRIGIPSNPQPGEVNNRVIGGTVSLVQGQQATEFSTYRASESDLAP CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEECCEEEEECCCCCCHHHHHCCCCCCCCC SSEKGMMGTVRNNGGFITTNVTPNSTIEIPGFGRTSVKVAESLGYLTRTGDGRYVETSRL CCCCCCEEEEECCCCEEEECCCCCCEEECCCCCCHHHHHHHHCCCEEECCCCCEEEHHHC GKDEGSSEGGTLEESKGTPNDAPDNGAELFGSGFEAEYGELIKDVPQGVYDSLLASANVH CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE IGEGLDLGSISEKLAPRLASSMGIEPKAAAAMLDEGSMIWQAQADIAVERHGADPDDFYQ ECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCEEEECCCCCHHHHHH WARDNRKNELQQAVNGHLFQRSTKGYTTLVNDYFDNTIPTVAALKAGGIPVTEKGGEVMV HHHCCHHHHHHHHHCCHHEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEECCCCEEEE KLKGHWMSVGAAVKARLV EECCCEEECCHHHHEECC >Mature Secondary Structure SVTTWSNMPDSVDDRIGIPSNPQPGEVNNRVIGGTVSLVQGQQATEFSTYRASESDLAP CCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEECCEEEEECCCCCCHHHHHCCCCCCCCC SSEKGMMGTVRNNGGFITTNVTPNSTIEIPGFGRTSVKVAESLGYLTRTGDGRYVETSRL CCCCCCEEEEECCCCEEEECCCCCCEEECCCCCCHHHHHHHHCCCEEECCCCCEEEHHHC GKDEGSSEGGTLEESKGTPNDAPDNGAELFGSGFEAEYGELIKDVPQGVYDSLLASANVH CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE IGEGLDLGSISEKLAPRLASSMGIEPKAAAAMLDEGSMIWQAQADIAVERHGADPDDFYQ ECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCEEEECCCCCHHHHHH WARDNRKNELQQAVNGHLFQRSTKGYTTLVNDYFDNTIPTVAALKAGGIPVTEKGGEVMV HHHCCHHHHHHHHHCCHHEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEECCCCEEEE KLKGHWMSVGAAVKARLV EECCCEEECCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA