| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is fliJ [C]
Identifier: 71906408
GI number: 71906408
Start: 836356
End: 836811
Strand: Reverse
Name: fliJ [C]
Synonym: Daro_0769
Alternate gene names: 71906408
Gene position: 836811-836356 (Counterclockwise)
Preceding gene: 71906409
Following gene: 71906407
Centisome position: 18.59
GC content: 53.95
Gene sequence:
>456_bases ATGACCCAACCCTTCTCGCTCCAGCCGTTGCTTGATCTGATGCAAACCCGCACCGATGAGGCGACGCGTCAACTCGGCCA GCTGATTGCAGAAGAACAAAACCAGCGCAGCCGCCTGCAGATGCTCGAACAATACCGTGACGAATACGCACAACGCCTTC GGGAGGCCACCCTGCAGGGCGTGACCCGCATGATCCTGCGCAACTATCAGGACTTTCTCGCCCGTATCGACGAAGCAGTC AAGCAGCAGAAAATCGCCGTTGAGAATTCCGAACGTAGCACGAAGACAGGAAAAGAAAACTGGCAGGCGCAGAACAAGCA ACTAAAAGCGATTGATACGCTGTCGCAGCGCCATGATGCACGTGAACGCTACCGGGAAAACAAACACGATCAAAAGTTGC AGGACGAATTTTCCACCCGAAAATTCGGGACCAGGGAAGATACAGACAGCAAGTAG
Upstream 100 bases:
>100_bases TCTCTACCCGAGAATGGAAAGTTTTCTGCAGCAGCAATTAATCGAGCAATCAGATTTCCCCAGCAGTCTAGAGGCGCTGA AGACGCTTTTTTAATAGCCC
Downstream 100 bases:
>100_bases CCACACACAGGCACGTATTTCGCTTAATACCTCCCGACATATATATCTTTCGAGGGGCAAGCATGGGCTTGACTGTCATA TCCAACATCGCATCCGCCAT
Product: flagellar biosynthesis chaperone FliJ-like protein
Products: NA
Alternate protein names: Flagellar Biosynthesis Chaperone; Flagellar FliJ Protein; Flagellar Protein FliJ; Flagellar Biosynthesis Chaperone FliJ-Like Protein; Flagellar Protein; Flagellar Export Protein; Flagellar Biosynthesis Chaperone FliJ; Flagellar Export FliJ
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTQPFSLQPLLDLMQTRTDEATRQLGQLIAEEQNQRSRLQMLEQYRDEYAQRLREATLQGVTRMILRNYQDFLARIDEAV KQQKIAVENSERSTKTGKENWQAQNKQLKAIDTLSQRHDARERYRENKHDQKLQDEFSTRKFGTREDTDSK
Sequences:
>Translated_151_residues MTQPFSLQPLLDLMQTRTDEATRQLGQLIAEEQNQRSRLQMLEQYRDEYAQRLREATLQGVTRMILRNYQDFLARIDEAV KQQKIAVENSERSTKTGKENWQAQNKQLKAIDTLSQRHDARERYRENKHDQKLQDEFSTRKFGTREDTDSK >Mature_150_residues TQPFSLQPLLDLMQTRTDEATRQLGQLIAEEQNQRSRLQMLEQYRDEYAQRLREATLQGVTRMILRNYQDFLARIDEAVK QQKIAVENSERSTKTGKENWQAQNKQLKAIDTLSQRHDARERYRENKHDQKLQDEFSTRKFGTREDTDSK
Specific function: The Flij Protein Is A Flagellar Protein That Affects Chemotactic Events. Mutations In Flij Results In Failure To Respond To Chemotactic Stimuli. [C]
COG id: COG2882
COG function: function code NUO; Flagellar biosynthesis chaperone
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18019; Mature: 17888
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPFSLQPLLDLMQTRTDEATRQLGQLIAEEQNQRSRLQMLEQYRDEYAQRLREATLQG CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTRMILRNYQDFLARIDEAVKQQKIAVENSERSTKTGKENWQAQNKQLKAIDTLSQRHDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH RERYRENKHDQKLQDEFSTRKFGTREDTDSK HHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TQPFSLQPLLDLMQTRTDEATRQLGQLIAEEQNQRSRLQMLEQYRDEYAQRLREATLQG CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTRMILRNYQDFLARIDEAVKQQKIAVENSERSTKTGKENWQAQNKQLKAIDTLSQRHDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH RERYRENKHDQKLQDEFSTRKFGTREDTDSK HHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA