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The map label for this gene is fliM [H]

Identifier: 71906405

GI number: 71906405

Start: 833670

End: 834686

Strand: Reverse

Name: fliM [H]

Synonym: Daro_0766

Alternate gene names: 71906405

Gene position: 834686-833670 (Counterclockwise)

Preceding gene: 71906406

Following gene: 71906404

Centisome position: 18.54

GC content: 57.03

Gene sequence:

>1017_bases
ATGGCCGGCGACTTTCTCTCCCAGGACGAGGTAGATGCCCTACTCAAGGGCGTTACCGGCGAGACTGACGAACCCGAAGA
GAGCGAGGGCGAAGGGGCTGGCGTTCGCGCCTACAACATCGGCACCCAGGAACGGATCGTCCGTGGCCGGATGCCGACCC
TGGAACTGGTTAACGAACGCTTCGCCCGCTACCTGCGGATTGGTCTGTTCAACTACATGCATCGGAATGCCGAGATTTCA
GTCGGTCCAATCCGCGTCCAGAAATACAGCGAATTCATTCGCAACCTGGTCGTTCCGACCAACCTGAATCTGGTCATTGC
CAAGCCCCTGCGCGGCACAGCCCTGTTCGTTTTTGATCCGAACCTCGTCTTCCTGGTCGTGGACAACATGTTTGGCGGCG
ACGGACGCTTCCACACACGCGTCGAAGGACGCGACTTCACGCCAACCGAGCAACGCATCATTCAGGGCCTGCTCAACGTG
GTGTTCACCGAATACAGCAAGTCCTGGAAACCGGTCTACGACATCAACTTCGAATACATTCGTTCGGAGATGAATTCCCA
GTTCGCCAATATCGCAACCCCTTCGGAAATCGTCGTCTCGACGACCTTTACGCTGGAGTTTGGTGGCGCGACCGCGGACA
TGCATATCTGCTTCCCCTACTCGATGCTGGAGCCAATCCGCGACCTGCTCTACAGCACGATGCAGAGCGACCAGTTGTCA
TCGGACAAACGCTGGATCGGCACCTTGCGGAAGCAGTTGCAAGGCGCGGAAGTGGAGATCGTCGCACTACTCGGTTCGGG
CAAGATAACACTCGGCCAGATACTCAAGCTGAAGGTGGGCGATGTCATTCCCCTTCATATCCCGGATAAGATTGAGGCCT
TGGTCGACAGCGTCCCGCTGATGGAATGCACCTACGGGCAGCAAAGCGGCCAATATGCGCTGAAGGTCGATCGATTCATT
GCCTCCTCGCCCGAAACACCGCATGCCGAACCGGCAACAGGAGAAAAAAATGGCTGA

Upstream 100 bases:

>100_bases
CATCGAGCCGCCGAAGAAAAACAAGAAGGGCGAAGTAGTCACGCCGGAAGGCCCGGTCAAGTCCGTCCTGTTCACCTCCT
TCATCATCCAGTAAGGAGCC

Downstream 100 bases:

>100_bases
CGAAATGGAAAACATCGAGAGCACCCCCGTGGAAGATGACGGCCAGATCAGCGAGGACGATTGGGCTGCAGCGATGTCCG
AACAGGCCATTAGCGATGCC

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MAGDFLSQDEVDALLKGVTGETDEPEESEGEGAGVRAYNIGTQERIVRGRMPTLELVNERFARYLRIGLFNYMHRNAEIS
VGPIRVQKYSEFIRNLVVPTNLNLVIAKPLRGTALFVFDPNLVFLVVDNMFGGDGRFHTRVEGRDFTPTEQRIIQGLLNV
VFTEYSKSWKPVYDINFEYIRSEMNSQFANIATPSEIVVSTTFTLEFGGATADMHICFPYSMLEPIRDLLYSTMQSDQLS
SDKRWIGTLRKQLQGAEVEIVALLGSGKITLGQILKLKVGDVIPLHIPDKIEALVDSVPLMECTYGQQSGQYALKVDRFI
ASSPETPHAEPATGEKNG

Sequences:

>Translated_338_residues
MAGDFLSQDEVDALLKGVTGETDEPEESEGEGAGVRAYNIGTQERIVRGRMPTLELVNERFARYLRIGLFNYMHRNAEIS
VGPIRVQKYSEFIRNLVVPTNLNLVIAKPLRGTALFVFDPNLVFLVVDNMFGGDGRFHTRVEGRDFTPTEQRIIQGLLNV
VFTEYSKSWKPVYDINFEYIRSEMNSQFANIATPSEIVVSTTFTLEFGGATADMHICFPYSMLEPIRDLLYSTMQSDQLS
SDKRWIGTLRKQLQGAEVEIVALLGSGKITLGQILKLKVGDVIPLHIPDKIEALVDSVPLMECTYGQQSGQYALKVDRFI
ASSPETPHAEPATGEKNG
>Mature_337_residues
AGDFLSQDEVDALLKGVTGETDEPEESEGEGAGVRAYNIGTQERIVRGRMPTLELVNERFARYLRIGLFNYMHRNAEISV
GPIRVQKYSEFIRNLVVPTNLNLVIAKPLRGTALFVFDPNLVFLVVDNMFGGDGRFHTRVEGRDFTPTEQRIIQGLLNVV
FTEYSKSWKPVYDINFEYIRSEMNSQFANIATPSEIVVSTTFTLEFGGATADMHICFPYSMLEPIRDLLYSTMQSDQLSS
DKRWIGTLRKQLQGAEVEIVALLGSGKITLGQILKLKVGDVIPLHIPDKIEALVDSVPLMECTYGQQSGQYALKVDRFIA
SSPETPHAEPATGEKNG

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=321, Percent_Identity=49.2211838006231, Blast_Score=328, Evalue=4e-91,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 37749; Mature: 37617

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGDFLSQDEVDALLKGVTGETDEPEESEGEGAGVRAYNIGTQERIVRGRMPTLELVNER
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCHHHHHHHH
FARYLRIGLFNYMHRNAEISVGPIRVQKYSEFIRNLVVPTNLNLVIAKPLRGTALFVFDP
HHHHHHHHHHHHHHCCCCEEECCEEHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEECC
NLVFLVVDNMFGGDGRFHTRVEGRDFTPTEQRIIQGLLNVVFTEYSKSWKPVYDINFEYI
CEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHH
RSEMNSQFANIATPSEIVVSTTFTLEFGGATADMHICFPYSMLEPIRDLLYSTMQSDQLS
HHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCC
SDKRWIGTLRKQLQGAEVEIVALLGSGKITLGQILKLKVGDVIPLHIPDKIEALVDSVPL
CHHHHHHHHHHHHCCCCEEEEEEECCCCEEHHHHEEEECCCEEEECCCHHHHHHHHCCCC
MECTYGQQSGQYALKVDRFIASSPETPHAEPATGEKNG
EEECCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGDFLSQDEVDALLKGVTGETDEPEESEGEGAGVRAYNIGTQERIVRGRMPTLELVNER
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCHHHHHHHH
FARYLRIGLFNYMHRNAEISVGPIRVQKYSEFIRNLVVPTNLNLVIAKPLRGTALFVFDP
HHHHHHHHHHHHHHCCCCEEECCEEHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEECC
NLVFLVVDNMFGGDGRFHTRVEGRDFTPTEQRIIQGLLNVVFTEYSKSWKPVYDINFEYI
CEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHH
RSEMNSQFANIATPSEIVVSTTFTLEFGGATADMHICFPYSMLEPIRDLLYSTMQSDQLS
HHHHHHHHHCCCCCCCEEEEEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCC
SDKRWIGTLRKQLQGAEVEIVALLGSGKITLGQILKLKVGDVIPLHIPDKIEALVDSVPL
CHHHHHHHHHHHHCCCCEEEEEEECCCCEEHHHHEEEECCCEEEECCCHHHHHHHHCCCC
MECTYGQQSGQYALKVDRFIASSPETPHAEPATGEKNG
EEECCCCCCCCEEEEEHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3519573; 9097040; 9278503; 2651416 [H]