| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906403
Identifier: 71906403
GI number: 71906403
Start: 832770
End: 833180
Strand: Reverse
Name: 71906403
Synonym: Daro_0764
Alternate gene names: NA
Gene position: 833180-832770 (Counterclockwise)
Preceding gene: 71906404
Following gene: 71906402
Centisome position: 18.51
GC content: 54.99
Gene sequence:
>411_bases TTGGCTTTGTTACGTTTTCTTCTCTTGTTCACTCCTTTCGCTGCGCATGCCGGAGATGCTCCCCCCGTGGGTATTTCGAC CGGCACTTATGCCCAGGCTGGCCTCGCCCTAGCCTTGATTGTTGGCCTTTTGGCTGCAACGGCCTGGCTGGCCCGTAAAG TTTCAGGCGGAAAAGGATTTGGCCAAGGTGGCATGAAGGTGCTTGGCGGGGTGGCTCTCGGACCACGCGAAAGAATTGTT CTGCTGGAGGTCGGCAACGACTGGTTGGTGATTGGTATCGTCCCGGGCCAGATCCGTACCTTGCATCGCATGGAGAAAGG TACCGTTCATGACGGCGCCTTATCGGCATCTACCGATAAACCCTTTGCTCAGTGGTTGAATGGCATTGCCAACCGTCAAA GTCATGAATAA
Upstream 100 bases:
>100_bases CCGATATCATTACCCCTTCCGAACGGATGCGAAAACTCAATCGCTAAACGCCCAGCCTAGTTTCGATTAAGATAGCGGAC TAATATCTCCGCATACGGGC
Downstream 100 bases:
>100_bases GCGCCTGGCAATGACACTGGCCCTCCTGCTTCCGGCAGGACTCGCCTTTGCTCAGGCGGCCGGTGGCCTGCCTGCGGTGA CCAGCACTCCGGCAGCGGGT
Product: flagellar biosynthesis protein, FliO
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MALLRFLLLFTPFAAHAGDAPPVGISTGTYAQAGLALALIVGLLAATAWLARKVSGGKGFGQGGMKVLGGVALGPRERIV LLEVGNDWLVIGIVPGQIRTLHRMEKGTVHDGALSASTDKPFAQWLNGIANRQSHE
Sequences:
>Translated_136_residues MALLRFLLLFTPFAAHAGDAPPVGISTGTYAQAGLALALIVGLLAATAWLARKVSGGKGFGQGGMKVLGGVALGPRERIV LLEVGNDWLVIGIVPGQIRTLHRMEKGTVHDGALSASTDKPFAQWLNGIANRQSHE >Mature_135_residues ALLRFLLLFTPFAAHAGDAPPVGISTGTYAQAGLALALIVGLLAATAWLARKVSGGKGFGQGGMKVLGGVALGPRERIVL LEVGNDWLVIGIVPGQIRTLHRMEKGTVHDGALSASTDKPFAQWLNGIANRQSHE
Specific function: Unknown
COG id: COG3190
COG function: function code N; Flagellar biogenesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14192; Mature: 14061
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLRFLLLFTPFAAHAGDAPPVGISTGTYAQAGLALALIVGLLAATAWLARKVSGGKGF CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GQGGMKVLGGVALGPRERIVLLEVGNDWLVIGIVPGQIRTLHRMEKGTVHDGALSASTDK CCCCHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCC PFAQWLNGIANRQSHE HHHHHHHHHHCCCCCC >Mature Secondary Structure ALLRFLLLFTPFAAHAGDAPPVGISTGTYAQAGLALALIVGLLAATAWLARKVSGGKGF HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GQGGMKVLGGVALGPRERIVLLEVGNDWLVIGIVPGQIRTLHRMEKGTVHDGALSASTDK CCCCHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCC PFAQWLNGIANRQSHE HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA