| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906029
Identifier: 71906029
GI number: 71906029
Start: 419183
End: 419641
Strand: Reverse
Name: 71906029
Synonym: Daro_0387
Alternate gene names: NA
Gene position: 419641-419183 (Counterclockwise)
Preceding gene: 71906061
Following gene: 71906028
Centisome position: 9.32
GC content: 47.49
Gene sequence:
>459_bases ATGTTTAAGAAAATTGCATCTGTAGCCATCTTTGCCGCTTTCATCACGGGCTGCGCATCTGTTCCGATGGAAAGCAAAGA AGCATCTGACCAAGCGAAGCGTTTCCCAGCGCCATCGCAAGGACAGGCAGGACTCTATATTTATCGCTCCGCCGGTGTTG GTGGAGCGCTGAAGAAAGACATTTGGGTCGATGGAAAATGCATTGGAGAGTCAGCACCAAATGTTTTCTTCTATGAGGAG GTGAAGGGGAATCAGGAGCATGTCATTGCCACGGAGTCGGAGTTTTCCCCTAACGAAATCAAGCTAGCAGTAGCAGATGG CATTAATTACTTCATTAGGCAGTACATAAAAATGGGGGTTTTTGTCGGCGGAGCAAACCTGGAAGTTGCGAACGAAGCCG AAGGAAAAGAGGTTGTCCGGAATCTGGAGATGGCTAAAAAAGGAACTTGTAGCGAATAA
Upstream 100 bases:
>100_bases CCGAGCCGTTGCAATGGGACATGCTTCACAAAATATGTAAAAGTGATATATGATATTCGGATTTTTGCTGTTTATACAAA TATCATCAAAAGGGAGAAAT
Downstream 100 bases:
>100_bases GATCAAGGCGGTTTGCTCGCTGACCGGCCGGCCCTCTCGCCTTGGTCGGTCAGTTAGACAAATACTCTGGCCTTATGGGA GCCTAGTATCGAGCCAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MFKKIASVAIFAAFITGCASVPMESKEASDQAKRFPAPSQGQAGLYIYRSAGVGGALKKDIWVDGKCIGESAPNVFFYEE VKGNQEHVIATESEFSPNEIKLAVADGINYFIRQYIKMGVFVGGANLEVANEAEGKEVVRNLEMAKKGTCSE
Sequences:
>Translated_152_residues MFKKIASVAIFAAFITGCASVPMESKEASDQAKRFPAPSQGQAGLYIYRSAGVGGALKKDIWVDGKCIGESAPNVFFYEE VKGNQEHVIATESEFSPNEIKLAVADGINYFIRQYIKMGVFVGGANLEVANEAEGKEVVRNLEMAKKGTCSE >Mature_152_residues MFKKIASVAIFAAFITGCASVPMESKEASDQAKRFPAPSQGQAGLYIYRSAGVGGALKKDIWVDGKCIGESAPNVFFYEE VKGNQEHVIATESEFSPNEIKLAVADGINYFIRQYIKMGVFVGGANLEVANEAEGKEVVRNLEMAKKGTCSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022548 - InterPro: IPR016596 [H]
Pfam domain/function: PF11008 DUF2846 [H]
EC number: NA
Molecular weight: Translated: 16409; Mature: 16409
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKIASVAIFAAFITGCASVPMESKEASDQAKRFPAPSQGQAGLYIYRSAGVGGALKKD CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC IWVDGKCIGESAPNVFFYEEVKGNQEHVIATESEFSPNEIKLAVADGINYFIRQYIKMGV EEECCEECCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHE FVGGANLEVANEAEGKEVVRNLEMAKKGTCSE EECCCCEEECCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MFKKIASVAIFAAFITGCASVPMESKEASDQAKRFPAPSQGQAGLYIYRSAGVGGALKKD CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC IWVDGKCIGESAPNVFFYEEVKGNQEHVIATESEFSPNEIKLAVADGINYFIRQYIKMGV EEECCEECCCCCCCEEEEECCCCCCCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHE FVGGANLEVANEAEGKEVVRNLEMAKKGTCSE EECCCCEEECCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]